RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 CKAP4Q07065 602 aaKnown RBP17.73■□□□□ 0.43
CHMP1A-201ENST00000397901 C2orf54Q08AI8 447 aa17.73■□□□□ 0.43
CHMP1A-201ENST00000397901 CRYMQ14894 314 aa17.73■□□□□ 0.43
CHMP1A-201ENST00000397901 MEA1Q16626 185 aa17.73■□□□□ 0.43
CHMP1A-201ENST00000397901 NBPF20Q3BBV1 942 aa17.73■□□□□ 0.43
CHMP1A-201ENST00000397901 C11orf91Q3C1V1 193 aa17.73■□□□□ 0.43
CHMP1A-201ENST00000397901 BICDL1Q6ZP65 573 aa17.73■□□□□ 0.43
CHMP1A-201ENST00000397901 SELENOOQ9BVL4 669 aa17.73■□□□□ 0.43
CHMP1A-201ENST00000397901 TTYH3Q9C0H2 523 aa17.73■□□□□ 0.43
CHMP1A-201ENST00000397901 JADE2Q9NQC1 790 aa17.73■□□□□ 0.43
CHMP1A-201ENST00000397901 RPS6KA4O75676 772 aa17.73■□□□□ 0.43
CHMP1A-201ENST00000397901 RHOBTB3O94955 611 aa17.73■□□□□ 0.43
CHMP1A-201ENST00000397901 IDEP14735 1019 aa17.73■□□□□ 0.43
CHMP1A-201ENST00000397901 CCDC178Q5BJE1 867 aa17.73■□□□□ 0.43
CHMP1A-201ENST00000397901 YTHDF3Q7Z739 585 aaKnown RBP17.73■□□□□ 0.43
CHMP1A-201ENST00000397901 GPIHBP1Q8IV16 184 aa17.73■□□□□ 0.43
CHMP1A-201ENST00000397901 EHBP1Q8NDI1 1231 aa17.73■□□□□ 0.43
CHMP1A-201ENST00000397901 SGSM3Q96HU1 749 aa17.73■□□□□ 0.43
CHMP1A-201ENST00000397901 RPGRIP1Q96KN7 1286 aa17.73■□□□□ 0.43
CHMP1A-201ENST00000397901 CNOT6LQ96LI5 555 aaKnown RBP17.73■□□□□ 0.43
CHMP1A-201ENST00000397901 MINPP1Q9UNW1 487 aa17.73■□□□□ 0.43
CHMP1A-201ENST00000397901 NDUFAB1O14561 156 aa17.72■□□□□ 0.43
CHMP1A-201ENST00000397901 NKRFO15226 690 aaKnown RBP eCLIP17.72■□□□□ 0.43
CHMP1A-201ENST00000397901 PRDX5P30044 214 aa17.72■□□□□ 0.43
CHMP1A-201ENST00000397901 HEATR3Q7Z4Q2 680 aa17.72■□□□□ 0.43
CHMP1A-201ENST00000397901 RABEP2Q9H5N1 569 aa17.72■□□□□ 0.43
CHMP1A-201ENST00000397901 KLC4Q9NSK0 619 aa17.72■□□□□ 0.43
CHMP1A-201ENST00000397901 TFCP2L1Q9NZI6 479 aa17.72■□□□□ 0.43
CHMP1A-201ENST00000397901 PCDHA6Q9UN73 950 aa17.72■□□□□ 0.43
CHMP1A-201ENST00000397901 PCDHA8Q9Y5H6 950 aa17.72■□□□□ 0.43
CHMP1A-201ENST00000397901 NEBLO76041 1014 aa17.72■□□□□ 0.43
CHMP1A-201ENST00000397901 USP17L8P0C7I0 530 aa17.72■□□□□ 0.43
CHMP1A-201ENST00000397901 MTIF2P46199 727 aaKnown RBP17.72■□□□□ 0.43
CHMP1A-201ENST00000397901 SKOR1P84550 965 aa17.72■□□□□ 0.43
CHMP1A-201ENST00000397901 TFAP4Q01664 338 aa17.72■□□□□ 0.43
CHMP1A-201ENST00000397901 PNMA1Q8ND90 353 aa17.72■□□□□ 0.43
CHMP1A-201ENST00000397901 SMCR8Q8TEV9 937 aaPredicted RBP17.72■□□□□ 0.43
CHMP1A-201ENST00000397901 CELF1Q92879 486 aaKnown RBP17.72■□□□□ 0.43
CHMP1A-201ENST00000397901 KBTBD4Q9NVX7 518 aa17.72■□□□□ 0.43
CHMP1A-201ENST00000397901 MCM9Q9NXL9 1143 aa17.72■□□□□ 0.43
CHMP1A-201ENST00000397901 PLCG1P19174 1290 aa17.71■□□□□ 0.43
CHMP1A-201ENST00000397901 SMTNP53814 917 aa17.71■□□□□ 0.43
CHMP1A-201ENST00000397901 IRX1P78414 480 aaPredicted RBP17.71■□□□□ 0.43
CHMP1A-201ENST00000397901 PLCB4Q15147 1175 aa17.71■□□□□ 0.43
CHMP1A-201ENST00000397901 ANKRD40Q6AI12 368 aa17.71■□□□□ 0.43
CHMP1A-201ENST00000397901 CCNI2Q6ZMN8 369 aaPredicted RBP17.71■□□□□ 0.43
CHMP1A-201ENST00000397901 KRT26Q7Z3Y9 468 aa17.71■□□□□ 0.43
CHMP1A-201ENST00000397901 SRP68Q9UHB9 627 aaKnown RBP17.71■□□□□ 0.43
CHMP1A-201ENST00000397901 PLEKP08567 350 aaPredicted RBP17.71■□□□□ 0.42
CHMP1A-201ENST00000397901 ZBED6P86452 979 aa17.71■□□□□ 0.42
CHMP1A-201ENST00000397901 PDE4DQ08499 809 aa17.71■□□□□ 0.42
CHMP1A-201ENST00000397901 P2RX5Q93086 422 aa17.71■□□□□ 0.42
CHMP1A-201ENST00000397901 PAGR1Q9BTK6 254 aa17.71■□□□□ 0.42
CHMP1A-201ENST00000397901 NOC4LQ9BVI4 516 aaKnown RBP17.71■□□□□ 0.42
CHMP1A-201ENST00000397901 LRWD1Q9UFC0 647 aa17.71■□□□□ 0.42
CHMP1A-201ENST00000397901 OPA1O60313 960 aa17.7■□□□□ 0.42
CHMP1A-201ENST00000397901 FCER1AP12319 257 aa17.7■□□□□ 0.42
CHMP1A-201ENST00000397901 MRPS25P82663 173 aaKnown RBP17.7■□□□□ 0.42
CHMP1A-201ENST00000397901 MAP2K1Q02750 393 aaPredicted RBP17.7■□□□□ 0.42
CHMP1A-201ENST00000397901 STK4Q13043 487 aa17.7■□□□□ 0.42
CHMP1A-201ENST00000397901 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.7■□□□□ 0.42
CHMP1A-201ENST00000397901 HPS3Q969F9 1004 aa17.7■□□□□ 0.42
CHMP1A-201ENST00000397901 DYNLL2Q96FJ2 89 aa17.7■□□□□ 0.42
CHMP1A-201ENST00000397901 DHTKD1Q96HY7 919 aaPredicted RBP17.7■□□□□ 0.42
CHMP1A-201ENST00000397901 NYXQ9GZU5 481 aa17.7■□□□□ 0.42
CHMP1A-201ENST00000397901 IL17RBQ9NRM6 502 aa17.7■□□□□ 0.42
CHMP1A-201ENST00000397901 ATP8A2Q9NTI2 1148 aa17.7■□□□□ 0.42
CHMP1A-201ENST00000397901 ARPP21Q9UBL0 812 aaPredicted RBP17.7■□□□□ 0.42
CHMP1A-201ENST00000397901 M0R2N6 131 aa17.7■□□□□ 0.42
CHMP1A-201ENST00000397901 ASIC1P78348 528 aa17.7■□□□□ 0.42
CHMP1A-201ENST00000397901 KIF5AQ12840 1032 aa17.7■□□□□ 0.42
CHMP1A-201ENST00000397901 CCDC96Q2M329 555 aa17.7■□□□□ 0.42
CHMP1A-201ENST00000397901 SLC35G1Q2M3R5 365 aa17.7■□□□□ 0.42
CHMP1A-201ENST00000397901 RNF217Q8TC41 542 aa17.7■□□□□ 0.42
CHMP1A-201ENST00000397901 NOC3LQ8WTT2 800 aaKnown RBP17.7■□□□□ 0.42
CHMP1A-201ENST00000397901 NUP58Q9BVL2 599 aa17.7■□□□□ 0.42
CHMP1A-201ENST00000397901 CCSER1Q9C0I3 900 aa17.7■□□□□ 0.42
CHMP1A-201ENST00000397901 USP21Q9UK80 565 aa17.7■□□□□ 0.42
CHMP1A-201ENST00000397901 ZNF263O14978 683 aa17.69■□□□□ 0.42
CHMP1A-201ENST00000397901 CCNE1P24864 410 aa17.69■□□□□ 0.42
CHMP1A-201ENST00000397901 ZNF662Q6ZS27 426 aa17.69■□□□□ 0.42
CHMP1A-201ENST00000397901 CABP7Q86V35 215 aa17.69■□□□□ 0.42
CHMP1A-201ENST00000397901 CCDC170Q8IYT3 715 aa17.69■□□□□ 0.42
CHMP1A-201ENST00000397901 SETDB2Q96T68 719 aa17.69■□□□□ 0.42
CHMP1A-201ENST00000397901 VCPKMTQ9H867 229 aa17.69■□□□□ 0.42
CHMP1A-201ENST00000397901 SH3GLB2Q9NR46 395 aa17.69■□□□□ 0.42
CHMP1A-201ENST00000397901 TAF1LQ8IZX4 1826 aa17.69■□□□□ 0.42
CHMP1A-201ENST00000397901 USP17L3A6NCW0 530 aa17.69■□□□□ 0.42
CHMP1A-201ENST00000397901 USP17L4A6NCW7 530 aa17.69■□□□□ 0.42
CHMP1A-201ENST00000397901 GNPATO15228 680 aa17.69■□□□□ 0.42
CHMP1A-201ENST00000397901 PAX7P23759 505 aa17.69■□□□□ 0.42
CHMP1A-201ENST00000397901 EZH2Q15910 746 aaKnown RBP17.69■□□□□ 0.42
CHMP1A-201ENST00000397901 TXNRD1Q16881 649 aa17.69■□□□□ 0.42
CHMP1A-201ENST00000397901 CEP85LQ5SZL2 805 aa17.69■□□□□ 0.42
CHMP1A-201ENST00000397901 USP17L1Q7RTZ2 530 aa17.69■□□□□ 0.42
CHMP1A-201ENST00000397901 FAM184BQ9ULE4 1060 aa17.69■□□□□ 0.42
CHMP1A-201ENST00000397901 LY75O60449 1722 aa17.68■□□□□ 0.42
CHMP1A-201ENST00000397901 RASSF9O75901 435 aa17.68■□□□□ 0.42
CHMP1A-201ENST00000397901 MYL1P05976 194 aa17.68■□□□□ 0.42
CHMP1A-201ENST00000397901 VAV2P52735 878 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms