RNA–Protein interactions for RNA: ENST00000397885.2

PUM3-202, Transcript of pumilio RNA binding family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUM3, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM3-202ENST00000397885 RBM12BQ8IXT5 1001 aaKnown RBP12.71□□□□□ -0.37
PUM3-202ENST00000397885 DTNBP1Q96EV8 351 aa12.71□□□□□ -0.37
PUM3-202ENST00000397885 GSDMAQ96QA5 445 aa12.71□□□□□ -0.37
PUM3-202ENST00000397885 TBC1D2BQ9UPU7 963 aa12.71□□□□□ -0.37
PUM3-202ENST00000397885 UBR2Q8IWV8 1755 aa12.71□□□□□ -0.38
PUM3-202ENST00000397885 A0A1W2PQC6 194 aa12.71□□□□□ -0.38
PUM3-202ENST00000397885 RFX5P48382 616 aaPredicted RBP12.71□□□□□ -0.38
PUM3-202ENST00000397885 COPB1P53618 953 aaKnown RBP12.71□□□□□ -0.38
PUM3-202ENST00000397885 SLC39A6Q13433 755 aa12.71□□□□□ -0.38
PUM3-202ENST00000397885 SPATA21Q7Z572 469 aa12.71□□□□□ -0.38
PUM3-202ENST00000397885 TTC5Q8N0Z6 440 aa12.71□□□□□ -0.38
PUM3-202ENST00000397885 TAF1DQ9H5J8 278 aaPredicted RBP12.71□□□□□ -0.38
PUM3-202ENST00000397885 ANKIB1Q9P2G1 1089 aa12.71□□□□□ -0.38
PUM3-202ENST00000397885 LUC7L2Q9Y383 392 aaKnown RBP12.71□□□□□ -0.38
PUM3-202ENST00000397885 KCPQ6ZWJ8 1503 aa12.7□□□□□ -0.38
PUM3-202ENST00000397885 GOLGA8BA8MQT2 603 aa12.7□□□□□ -0.38
PUM3-202ENST00000397885 RNF225M0QZC1 329 aaPredicted RBP12.7□□□□□ -0.38
PUM3-202ENST00000397885 ATP4AP20648 1035 aa12.7□□□□□ -0.38
PUM3-202ENST00000397885 PAFAH1B1P43034 410 aa12.7□□□□□ -0.38
PUM3-202ENST00000397885 ITIH4Q14624 930 aa12.7□□□□□ -0.38
PUM3-202ENST00000397885 IFI16Q16666 785 aaKnown RBP12.7□□□□□ -0.38
PUM3-202ENST00000397885 KRT40Q6A162 431 aa12.7□□□□□ -0.38
PUM3-202ENST00000397885 RUFY4Q6ZNE9 571 aa12.7□□□□□ -0.38
PUM3-202ENST00000397885 CACNA2D4Q7Z3S7 1137 aa12.7□□□□□ -0.38
PUM3-202ENST00000397885 MAATS1Q7Z4T9 603 aa12.7□□□□□ -0.38
PUM3-202ENST00000397885 ANKRD23Q86SG2 305 aa12.7□□□□□ -0.38
PUM3-202ENST00000397885 ANKS4BQ8N8V4 417 aa12.7□□□□□ -0.38
PUM3-202ENST00000397885 DBNDD2Q9BQY9 259 aa12.7□□□□□ -0.38
PUM3-202ENST00000397885 ALG1Q9BT22 464 aa12.7□□□□□ -0.38
PUM3-202ENST00000397885 PLCB1Q9NQ66 1216 aa12.7□□□□□ -0.38
PUM3-202ENST00000397885 FBXO3Q9UK99 471 aa12.7□□□□□ -0.38
PUM3-202ENST00000397885 CAPN11Q9UMQ6 739 aa12.7□□□□□ -0.38
PUM3-202ENST00000397885 KLF18A0A0U1RQI7 1052 aa12.7□□□□□ -0.38
PUM3-202ENST00000397885 SPDYE3A6NKU9 549 aa12.7□□□□□ -0.38
PUM3-202ENST00000397885 GRIN3BO60391 1043 aa12.7□□□□□ -0.38
PUM3-202ENST00000397885 TACC1O75410 805 aa12.7□□□□□ -0.38
PUM3-202ENST00000397885 A1BGP04217 495 aa12.7□□□□□ -0.38
PUM3-202ENST00000397885 CNGA1P29973 690 aa12.7□□□□□ -0.38
PUM3-202ENST00000397885 HSPA9P38646 679 aaKnown RBP12.7□□□□□ -0.38
PUM3-202ENST00000397885 KIF5AQ12840 1032 aa12.7□□□□□ -0.38
PUM3-202ENST00000397885 TTF1Q15361 905 aaPredicted RBP12.7□□□□□ -0.38
PUM3-202ENST00000397885 QPCTQ16769 361 aa12.7□□□□□ -0.38
PUM3-202ENST00000397885 INTS5Q6P9B9 1019 aaKnown RBP12.7□□□□□ -0.38
PUM3-202ENST00000397885 DDX46Q7L014 1031 aaKnown RBP12.7□□□□□ -0.38
PUM3-202ENST00000397885 DNAJC10Q8IXB1 793 aa12.7□□□□□ -0.38
PUM3-202ENST00000397885 FAM81AQ8TBF8 368 aa12.7□□□□□ -0.38
PUM3-202ENST00000397885 CENPTQ96BT3 561 aa12.7□□□□□ -0.38
PUM3-202ENST00000397885 BICD1Q96G01 975 aa12.7□□□□□ -0.38
PUM3-202ENST00000397885 KCNMB3Q9NPA1 279 aa12.7□□□□□ -0.38
PUM3-202ENST00000397885 CCDC87Q9NVE4 849 aa12.7□□□□□ -0.38
PUM3-202ENST00000397885 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.7□□□□□ -0.38
PUM3-202ENST00000397885 FBXO2Q9UK22 296 aaPredicted RBP12.7□□□□□ -0.38
PUM3-202ENST00000397885 HYOU1Q9Y4L1 999 aa12.7□□□□□ -0.38
PUM3-202ENST00000397885 C4AP0C0L4 1744 aa12.69□□□□□ -0.38
PUM3-202ENST00000397885 RASSF10A6NK89 507 aa12.69□□□□□ -0.38
PUM3-202ENST00000397885 PPP1R3GB7ZBB8 358 aa12.69□□□□□ -0.38
PUM3-202ENST00000397885 GCOM1H8Y6P7 765 aaPredicted RBP12.69□□□□□ -0.38
PUM3-202ENST00000397885 ORC4O43929 436 aa12.69□□□□□ -0.38
PUM3-202ENST00000397885 NPTXRO95502 500 aa12.69□□□□□ -0.38
PUM3-202ENST00000397885 SNRPA1P09661 255 aaKnown RBP12.69□□□□□ -0.38
PUM3-202ENST00000397885 MYZAPP0CAP1 466 aa12.69□□□□□ -0.38
PUM3-202ENST00000397885 CMPK2Q5EBM0 449 aa12.69□□□□□ -0.38
PUM3-202ENST00000397885 ZMYM1Q5SVZ6 1142 aa12.69□□□□□ -0.38
PUM3-202ENST00000397885 AGBL2Q5U5Z8 902 aa12.69□□□□□ -0.38
PUM3-202ENST00000397885 ARHGAP22Q7Z5H3 698 aa12.69□□□□□ -0.38
PUM3-202ENST00000397885 SUDS3Q9H7L9 328 aaPredicted RBP12.69□□□□□ -0.38
PUM3-202ENST00000397885 VIMP08670 466 aaKnown RBP12.68□□□□□ -0.38
PUM3-202ENST00000397885 MMP10P09238 476 aa12.68□□□□□ -0.38
PUM3-202ENST00000397885 HSPD1P10809 573 aaKnown RBP12.68□□□□□ -0.38
PUM3-202ENST00000397885 CYP19A1P11511 503 aaPredicted RBP12.68□□□□□ -0.38
PUM3-202ENST00000397885 CD44P16070 742 aaKnown RBP12.68□□□□□ -0.38
PUM3-202ENST00000397885 CDK17Q00537 523 aa12.68□□□□□ -0.38
PUM3-202ENST00000397885 NCAPG2Q86XI2 1143 aa12.68□□□□□ -0.38
PUM3-202ENST00000397885 STK11IPQ8N1F8 1099 aa12.68□□□□□ -0.38
PUM3-202ENST00000397885 ZNF513Q8N8E2 541 aaPredicted RBP12.68□□□□□ -0.38
PUM3-202ENST00000397885 CCDC197Q8NCU1 140 aa12.68□□□□□ -0.38
PUM3-202ENST00000397885 B4GALNT2Q8NHY0 566 aa12.68□□□□□ -0.38
PUM3-202ENST00000397885 SMCR8Q8TEV9 937 aaPredicted RBP12.68□□□□□ -0.38
PUM3-202ENST00000397885 AGAP11Q8TF27 550 aa12.68□□□□□ -0.38
PUM3-202ENST00000397885 ZNHIT6Q9NWK9 470 aaKnown RBP12.68□□□□□ -0.38
PUM3-202ENST00000397885 PAG1Q9NWQ8 432 aa12.68□□□□□ -0.38
PUM3-202ENST00000397885 ARFGEF2Q9Y6D5 1785 aa12.68□□□□□ -0.38
PUM3-202ENST00000397885 DDX60Q8IY21 1712 aaKnown RBP12.68□□□□□ -0.38
PUM3-202ENST00000397885 ABCC12Q96J65 1359 aa12.68□□□□□ -0.38
PUM3-202ENST00000397885 A0A087WZG4 1122 aa12.68□□□□□ -0.38
PUM3-202ENST00000397885 GYS1P13807 737 aa12.68□□□□□ -0.38
PUM3-202ENST00000397885 KIF5BP33176 963 aa12.68□□□□□ -0.38
PUM3-202ENST00000397885 PPP2R2AP63151 447 aa12.68□□□□□ -0.38
PUM3-202ENST00000397885 SLC7A5Q01650 507 aa12.68□□□□□ -0.38
PUM3-202ENST00000397885 TRIM29Q14134 588 aa12.68□□□□□ -0.38
PUM3-202ENST00000397885 LBRQ14739 615 aaKnown RBP12.68□□□□□ -0.38
PUM3-202ENST00000397885 WDR59Q6PJI9 974 aa12.68□□□□□ -0.38
PUM3-202ENST00000397885 NFXL1Q6ZNB6 911 aa12.68□□□□□ -0.38
PUM3-202ENST00000397885 SH3RF1Q7Z6J0 888 aa12.68□□□□□ -0.38
PUM3-202ENST00000397885 CPLX4Q7Z7G2 160 aa12.68□□□□□ -0.38
PUM3-202ENST00000397885 CNOT10Q9H9A5 744 aaKnown RBP12.68□□□□□ -0.38
PUM3-202ENST00000397885 GJB4Q9NTQ9 266 aa12.68□□□□□ -0.38
PUM3-202ENST00000397885 CWC25Q9NXE8 425 aaPredicted RBP12.68□□□□□ -0.38
PUM3-202ENST00000397885 RWDD2AQ9UIY3 292 aa12.68□□□□□ -0.38
PUM3-202ENST00000397885 TTC26A0AVF1 554 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms