RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 MUM1L1Q5H9M0 696 aa19.34■□□□□ 0.69
TSPAN4-205ENST00000397406 TBC1D5Q92609 795 aa19.34■□□□□ 0.69
TSPAN4-205ENST00000397406 TEX13BQ9BXU2 312 aa19.34■□□□□ 0.69
TSPAN4-205ENST00000397406 POLR3EQ9NVU0 708 aa19.34■□□□□ 0.69
TSPAN4-205ENST00000397406 RTEL1Q9NZ71 1219 aa19.34■□□□□ 0.69
TSPAN4-205ENST00000397406 CLIC4Q9Y696 253 aa19.34■□□□□ 0.69
TSPAN4-205ENST00000397406 LCTP09848 1927 aa19.33■□□□□ 0.69
TSPAN4-205ENST00000397406 NFIBO00712 420 aa19.33■□□□□ 0.68
TSPAN4-205ENST00000397406 WNT7AO00755 349 aa19.33■□□□□ 0.68
TSPAN4-205ENST00000397406 FIBPO43427 364 aa19.33■□□□□ 0.68
TSPAN4-205ENST00000397406 ADCY3O60266 1144 aa19.33■□□□□ 0.68
TSPAN4-205ENST00000397406 CCL5P13501 91 aa19.33■□□□□ 0.68
TSPAN4-205ENST00000397406 STAT3P40763 770 aa19.33■□□□□ 0.68
TSPAN4-205ENST00000397406 TRAPPC10P48553 1259 aa19.33■□□□□ 0.68
TSPAN4-205ENST00000397406 NASPP49321 788 aaPredicted RBP19.33■□□□□ 0.68
TSPAN4-205ENST00000397406 IRF5Q13568 498 aa19.33■□□□□ 0.68
TSPAN4-205ENST00000397406 NBR1Q14596 966 aa19.33■□□□□ 0.68
TSPAN4-205ENST00000397406 NONOQ15233 471 aaKnown RBP eCLIP19.33■□□□□ 0.689e-6■■■□□ 19
TSPAN4-205ENST00000397406 ANO1Q5XXA6 986 aa19.33■□□□□ 0.68
TSPAN4-205ENST00000397406 TMEM87AQ8NBN3 555 aa19.33■□□□□ 0.68
TSPAN4-205ENST00000397406 PGBD1Q96JS3 809 aa19.33■□□□□ 0.68
TSPAN4-205ENST00000397406 TRERF1Q96PN7 1200 aa19.33■□□□□ 0.68
TSPAN4-205ENST00000397406 SCAND2PQ9GZW5 306 aaPredicted RBP19.33■□□□□ 0.68
TSPAN4-205ENST00000397406 NOL7Q9UMY1 257 aaKnown RBP19.33■□□□□ 0.68
TSPAN4-205ENST00000397406 CFBP00751 764 aa19.32■□□□□ 0.68
TSPAN4-205ENST00000397406 HSD17B4P51659 736 aa19.32■□□□□ 0.68
TSPAN4-205ENST00000397406 CEBPZQ03701 1054 aaKnown RBP19.32■□□□□ 0.68
TSPAN4-205ENST00000397406 AP3B2Q13367 1082 aa19.32■□□□□ 0.68
TSPAN4-205ENST00000397406 INF2Q27J81 1249 aa19.32■□□□□ 0.68
TSPAN4-205ENST00000397406 TKFCQ3LXA3 575 aa19.32■□□□□ 0.68
TSPAN4-205ENST00000397406 PRPF38BQ5VTL8 546 aaKnown RBP19.32■□□□□ 0.68
TSPAN4-205ENST00000397406 MCTP2Q6DN12 878 aa19.32■□□□□ 0.68
TSPAN4-205ENST00000397406 LEO1Q8WVC0 666 aaPredicted RBP19.32■□□□□ 0.68
TSPAN4-205ENST00000397406 UNC93B1Q9H1C4 597 aa19.32■□□□□ 0.68
TSPAN4-205ENST00000397406 HOMER2Q9NSB8 354 aa19.32■□□□□ 0.68
TSPAN4-205ENST00000397406 RNF146Q9NTX7 359 aa19.32■□□□□ 0.68
TSPAN4-205ENST00000397406 RCOR1Q9UKL0 485 aa19.32■□□□□ 0.68
TSPAN4-205ENST00000397406 PCDHB6Q9Y5E3 794 aa19.32■□□□□ 0.68
TSPAN4-205ENST00000397406 GCOM1H8Y6P7 765 aaPredicted RBP19.31■□□□□ 0.68
TSPAN4-205ENST00000397406 YEATS4O95619 227 aa19.31■□□□□ 0.68
TSPAN4-205ENST00000397406 POLR2MP0CAP2 368 aa19.31■□□□□ 0.68
TSPAN4-205ENST00000397406 SF3A1Q15459 793 aaKnown RBP19.31■□□□□ 0.68
TSPAN4-205ENST00000397406 UBE2Q1Q7Z7E8 422 aa19.31■□□□□ 0.68
TSPAN4-205ENST00000397406 MCF2L2Q86YR7 1114 aa19.31■□□□□ 0.68
TSPAN4-205ENST00000397406 SAMD3Q8N6K7 520 aa19.31■□□□□ 0.68
TSPAN4-205ENST00000397406 SLAIN1Q8ND83 568 aa19.31■□□□□ 0.68
TSPAN4-205ENST00000397406 TBCKQ8TEA7 893 aa19.31■□□□□ 0.68
TSPAN4-205ENST00000397406 GTF3C2Q8WUA4 911 aaPredicted RBP19.31■□□□□ 0.68
TSPAN4-205ENST00000397406 SPATC1LQ9H0A9 340 aa19.31■□□□□ 0.68
TSPAN4-205ENST00000397406 RABGAP1Q9Y3P9 1069 aa19.31■□□□□ 0.68
TSPAN4-205ENST00000397406 ELP1O95163 1332 aa19.3■□□□□ 0.68
TSPAN4-205ENST00000397406 DDX11L8A8MPP1 907 aa19.3■□□□□ 0.68
TSPAN4-205ENST00000397406 GOLGA6L22H0YM25 854 aa19.3■□□□□ 0.68
TSPAN4-205ENST00000397406 EDIL3O43854 480 aa19.3■□□□□ 0.68
TSPAN4-205ENST00000397406 FOSP01100 380 aaPredicted RBP19.3■□□□□ 0.68
TSPAN4-205ENST00000397406 INHAP05111 366 aa19.3■□□□□ 0.68
TSPAN4-205ENST00000397406 HOXA13P31271 388 aaPredicted RBP19.3■□□□□ 0.68
TSPAN4-205ENST00000397406 TRIM32Q13049 653 aa19.3■□□□□ 0.68
TSPAN4-205ENST00000397406 PLS1Q14651 629 aa19.3■□□□□ 0.68
TSPAN4-205ENST00000397406 PTPAQ15257 358 aa19.3■□□□□ 0.68
TSPAN4-205ENST00000397406 TTC38Q5R3I4 469 aa19.3■□□□□ 0.68
TSPAN4-205ENST00000397406 RIOX2Q8IUF8 465 aa19.3■□□□□ 0.68
TSPAN4-205ENST00000397406 LINC00301Q8NCQ3 95 aa19.3■□□□□ 0.68
TSPAN4-205ENST00000397406 PXYLP1Q8TE99 480 aa19.3■□□□□ 0.68
TSPAN4-205ENST00000397406 SPATA32Q96LK8 384 aa19.3■□□□□ 0.68
TSPAN4-205ENST00000397406 PAGR1Q9BTK6 254 aa19.3■□□□□ 0.68
TSPAN4-205ENST00000397406 ANO3Q9BYT9 981 aa19.3■□□□□ 0.68
TSPAN4-205ENST00000397406 PORCNQ9H237 461 aa19.3■□□□□ 0.68
TSPAN4-205ENST00000397406 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.3■□□□□ 0.68
TSPAN4-205ENST00000397406 LMBRD1Q9NUN5 540 aa19.3■□□□□ 0.68
TSPAN4-205ENST00000397406 DOCK3Q8IZD9 2030 aa19.29■□□□□ 0.68
TSPAN4-205ENST00000397406 ATP2B1P20020 1258 aa19.29■□□□□ 0.68
TSPAN4-205ENST00000397406 MAP3K20Q9NYL2 800 aaKnown RBP19.29■□□□□ 0.68
TSPAN4-205ENST00000397406 PLXNB2O15031 1838 aa19.28■□□□□ 0.68
TSPAN4-205ENST00000397406 ZNFX1Q9P2E3 1918 aaKnown RBP19.28■□□□□ 0.68
TSPAN4-205ENST00000397406 PRPF40AO75400 957 aaKnown RBP19.28■□□□□ 0.68
TSPAN4-205ENST00000397406 GJB1P08034 283 aa19.28■□□□□ 0.68
TSPAN4-205ENST00000397406 GJA8P48165 433 aa19.28■□□□□ 0.68
TSPAN4-205ENST00000397406 SLC39A14Q15043 492 aa19.28■□□□□ 0.68
TSPAN4-205ENST00000397406 CSPP1Q1MSJ5 1256 aa19.28■□□□□ 0.68
TSPAN4-205ENST00000397406 NEK8Q86SG6 692 aa19.28■□□□□ 0.68
TSPAN4-205ENST00000397406 CHST13Q8NET6 341 aa19.28■□□□□ 0.68
TSPAN4-205ENST00000397406 CRYGNQ8WXF5 182 aa19.28■□□□□ 0.68
TSPAN4-205ENST00000397406 MOV10L1Q9BXT6 1211 aaKnown RBP19.28■□□□□ 0.68
TSPAN4-205ENST00000397406 RNF208Q9H0X6 261 aa19.28■□□□□ 0.68
TSPAN4-205ENST00000397406 ACAD9Q9H845 621 aa19.28■□□□□ 0.68
TSPAN4-205ENST00000397406 SPDYE3A6NKU9 549 aa19.27■□□□□ 0.68
TSPAN4-205ENST00000397406 ERVK-9P63128 1117 aa19.27■□□□□ 0.68
TSPAN4-205ENST00000397406 ERVK-24P63145 666 aa19.27■□□□□ 0.68
TSPAN4-205ENST00000397406 STK38Q15208 465 aa19.27■□□□□ 0.68
TSPAN4-205ENST00000397406 ZNF174Q15697 407 aa19.27■□□□□ 0.68
TSPAN4-205ENST00000397406 FCHSD1Q86WN1 690 aa19.27■□□□□ 0.68
TSPAN4-205ENST00000397406 GPRC5AQ8NFJ5 357 aa19.27■□□□□ 0.68
TSPAN4-205ENST00000397406 USP6NLQ92738 828 aa19.27■□□□□ 0.68
TSPAN4-205ENST00000397406 MAF1Q9H063 256 aa19.27■□□□□ 0.68
TSPAN4-205ENST00000397406 COL20A1Q9P218 1284 aa19.27■□□□□ 0.68
TSPAN4-205ENST00000397406 MORC2Q9Y6X9 1032 aaPredicted RBP19.27■□□□□ 0.68
TSPAN4-205ENST00000397406 SPTLC2O15270 562 aa19.26■□□□□ 0.67
TSPAN4-205ENST00000397406 SLC25A27O95847 323 aa19.26■□□□□ 0.67
TSPAN4-205ENST00000397406 SREBF1P36956 1147 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms