RNA–Protein interactions for RNA: ENST00000397013.2

NUP98-206, Transcript of nucleoporin 98, humanhuman

TSL 5

Gene NUP98, Length 939 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-206ENST00000397013 SMPD1P17405 629 aa9.58□□□□□ -0.88
NUP98-206ENST00000397013 FUT2Q10981 343 aa9.58□□□□□ -0.88
NUP98-206ENST00000397013 SBK1Q52WX2 424 aa9.58□□□□□ -0.88
NUP98-206ENST00000397013 AKNAD1Q5T1N1 836 aa9.58□□□□□ -0.88
NUP98-206ENST00000397013 SLFN13Q68D06 897 aa9.58□□□□□ -0.88
NUP98-206ENST00000397013 KRT40Q6A162 431 aa9.58□□□□□ -0.88
NUP98-206ENST00000397013 RPAP2Q8IXW5 612 aaPredicted RBP9.58□□□□□ -0.88
NUP98-206ENST00000397013 SLC43A3Q8NBI5 491 aa9.58□□□□□ -0.88
NUP98-206ENST00000397013 PCSK9Q8NBP7 692 aaKnown RBP9.58□□□□□ -0.88
NUP98-206ENST00000397013 ATXN2LQ8WWM7 1075 aaKnown RBP9.58□□□□□ -0.88
NUP98-206ENST00000397013 CEP95Q96GE4 821 aa9.58□□□□□ -0.88
NUP98-206ENST00000397013 UHRF1Q96T88 793 aaPredicted RBP9.58□□□□□ -0.88
NUP98-206ENST00000397013 SEC62Q99442 399 aaKnown RBP9.58□□□□□ -0.88
NUP98-206ENST00000397013 ZMYND15Q9H091 742 aa9.58□□□□□ -0.88
NUP98-206ENST00000397013 WNT8AQ9H1J5 351 aa9.58□□□□□ -0.88
NUP98-206ENST00000397013 ABHD16BQ9H3Z7 469 aa9.58□□□□□ -0.88
NUP98-206ENST00000397013 CERS4Q9HA82 394 aa9.58□□□□□ -0.88
NUP98-206ENST00000397013 GNEQ9Y223 722 aaKnown RBP9.58□□□□□ -0.88
NUP98-206ENST00000397013 PCDHB15Q9Y5E8 787 aa9.58□□□□□ -0.88
NUP98-206ENST00000397013 ZNF536O15090 1300 aa9.57□□□□□ -0.88
NUP98-206ENST00000397013 NAV1Q8NEY1 1877 aa9.57□□□□□ -0.88
NUP98-206ENST00000397013 EPOPA6NHQ4 379 aa9.57□□□□□ -0.88
NUP98-206ENST00000397013 TMEM232C9JQI7 657 aa9.57□□□□□ -0.88
NUP98-206ENST00000397013 ATP2A1O14983 1001 aa9.57□□□□□ -0.88
NUP98-206ENST00000397013 B4GALT4O60513 344 aa9.57□□□□□ -0.88
NUP98-206ENST00000397013 RAB11FIP3O75154 756 aa9.57□□□□□ -0.88
NUP98-206ENST00000397013 BMP1P13497 986 aa9.57□□□□□ -0.88
NUP98-206ENST00000397013 COPB2P35606 906 aa9.57□□□□□ -0.88
NUP98-206ENST00000397013 KCNQ1P51787 676 aa9.57□□□□□ -0.88
NUP98-206ENST00000397013 MRPS5P82675 430 aaKnown RBP9.57□□□□□ -0.88
NUP98-206ENST00000397013 TNFAIP2Q03169 654 aa9.57□□□□□ -0.88
NUP98-206ENST00000397013 ITGA7Q13683 1181 aa9.57□□□□□ -0.88
NUP98-206ENST00000397013 MUM1L1Q5H9M0 696 aa9.57□□□□□ -0.88
NUP98-206ENST00000397013 C20orf194Q5TEA3 1177 aa9.57□□□□□ -0.88
NUP98-206ENST00000397013 TAPT1Q6NXT6 567 aa9.57□□□□□ -0.88
NUP98-206ENST00000397013 CCDC174Q6PII3 467 aa9.57□□□□□ -0.88
NUP98-206ENST00000397013 NYAP1Q6ZVC0 841 aa9.57□□□□□ -0.88
NUP98-206ENST00000397013 SPRED2Q7Z698 418 aa9.57□□□□□ -0.88
NUP98-206ENST00000397013 AMOTL1Q8IY63 956 aa9.57□□□□□ -0.88
NUP98-206ENST00000397013 FAM133AQ8N9E0 248 aa9.57□□□□□ -0.88
NUP98-206ENST00000397013 MKL1Q969V6 931 aa9.57□□□□□ -0.88
NUP98-206ENST00000397013 NOC4LQ9BVI4 516 aaKnown RBP9.57□□□□□ -0.88
NUP98-206ENST00000397013 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.57□□□□□ -0.882e-6■■□□□ 11.4
NUP98-206ENST00000397013 HIPK3Q9H422 1215 aa9.57□□□□□ -0.88
NUP98-206ENST00000397013 A1CFQ9NQ94 594 aaKnown RBP9.57□□□□□ -0.88
NUP98-206ENST00000397013 MTMR4Q9NYA4 1195 aa9.57□□□□□ -0.88
NUP98-206ENST00000397013 THEGQ9P2T0 379 aa9.57□□□□□ -0.88
NUP98-206ENST00000397013 MSRAQ9UJ68 235 aa9.57□□□□□ -0.88
NUP98-206ENST00000397013 CTDP1Q9Y5B0 961 aaPredicted RBP9.57□□□□□ -0.88
NUP98-206ENST00000397013 TLR3O15455 904 aaKnown RBP9.56□□□□□ -0.88
NUP98-206ENST00000397013 CYP2C9P11712 490 aa9.56□□□□□ -0.88
NUP98-206ENST00000397013 BMP3P12645 472 aa9.56□□□□□ -0.88
NUP98-206ENST00000397013 MCCP23508 829 aa9.56□□□□□ -0.88
NUP98-206ENST00000397013 NKX3-2P78367 333 aa9.56□□□□□ -0.88
NUP98-206ENST00000397013 TTLL4Q14679 1199 aa9.56□□□□□ -0.88
NUP98-206ENST00000397013 FSCN1Q16658 493 aaKnown RBP9.56□□□□□ -0.88
NUP98-206ENST00000397013 PSRC1Q6PGN9 363 aaPredicted RBP9.56□□□□□ -0.88
NUP98-206ENST00000397013 FBXO16Q8IX29 292 aaPredicted RBP9.56□□□□□ -0.88
NUP98-206ENST00000397013 CHST13Q8NET6 341 aa9.56□□□□□ -0.88
NUP98-206ENST00000397013 SLC28A3Q9HAS3 691 aa9.56□□□□□ -0.88
NUP98-206ENST00000397013 SPC25Q9HBM1 224 aa9.56□□□□□ -0.88
NUP98-206ENST00000397013 RNF146Q9NTX7 359 aa9.56□□□□□ -0.88
NUP98-206ENST00000397013 TRMT13Q9NUP7 481 aaKnown RBP9.56□□□□□ -0.88
NUP98-206ENST00000397013 ARPP21Q9UBL0 812 aaPredicted RBP9.56□□□□□ -0.88
NUP98-206ENST00000397013 FEM1BQ9UK73 627 aa9.56□□□□□ -0.88
NUP98-206ENST00000397013 ISY1Q9ULR0 285 aaKnown RBP9.56□□□□□ -0.88
NUP98-206ENST00000397013 ZNFX1Q9P2E3 1918 aaKnown RBP9.56□□□□□ -0.88
NUP98-206ENST00000397013 MROH7Q68CQ1 1323 aa9.56□□□□□ -0.88
NUP98-206ENST00000397013 COL11A1P12107 1806 aaPredicted RBP9.55□□□□□ -0.88
NUP98-206ENST00000397013 ZBBXA8MT70 800 aa9.55□□□□□ -0.88
NUP98-206ENST00000397013 GPAA1O43292 621 aa9.55□□□□□ -0.88
NUP98-206ENST00000397013 NMT2O60551 498 aa9.55□□□□□ -0.88
NUP98-206ENST00000397013 APPP05067 770 aa9.55□□□□□ -0.88
NUP98-206ENST00000397013 ALAS1P13196 640 aa9.55□□□□□ -0.88
NUP98-206ENST00000397013 TFAP4Q01664 338 aa9.55□□□□□ -0.88
NUP98-206ENST00000397013 KCTD1Q719H9 257 aa9.55□□□□□ -0.88
NUP98-206ENST00000397013 DEFB128Q7Z7B8 93 aa9.55□□□□□ -0.88
NUP98-206ENST00000397013 TLK2Q86UE8 772 aa9.55□□□□□ -0.88
NUP98-206ENST00000397013 IFNL3Q8IZI9 196 aa9.55□□□□□ -0.88
NUP98-206ENST00000397013 ZNF444Q8N0Y2 327 aaPredicted RBP9.55□□□□□ -0.88
NUP98-206ENST00000397013 TRERF1Q96PN7 1200 aa9.55□□□□□ -0.88
NUP98-206ENST00000397013 EPHX3Q9H6B9 360 aa9.55□□□□□ -0.88
NUP98-206ENST00000397013 PCDHGC3Q9UN70 934 aa9.55□□□□□ -0.88
NUP98-206ENST00000397013 MTMR7Q9Y216 660 aa9.55□□□□□ -0.88
NUP98-206ENST00000397013 BDP1A6H8Y1 2624 aa9.55□□□□□ -0.88
NUP98-206ENST00000397013 BAZ2AQ9UIF9 1905 aaKnown RBP9.54□□□□□ -0.88
NUP98-206ENST00000397013 RNF113AO15541 343 aaKnown RBP9.54□□□□□ -0.88
NUP98-206ENST00000397013 HMMRO75330 724 aa9.54□□□□□ -0.88
NUP98-206ENST00000397013 TTLL1O95922 423 aa9.54□□□□□ -0.88
NUP98-206ENST00000397013 TDO2P48775 406 aa9.54□□□□□ -0.88
NUP98-206ENST00000397013 MCM6Q14566 821 aa9.54□□□□□ -0.88
NUP98-206ENST00000397013 RAB30Q15771 203 aa9.54□□□□□ -0.88
NUP98-206ENST00000397013 QPCTQ16769 361 aa9.54□□□□□ -0.88
NUP98-206ENST00000397013 TTBK2Q6IQ55 1244 aa9.54□□□□□ -0.88
NUP98-206ENST00000397013 ZSCAN25Q6NSZ9 544 aa9.54□□□□□ -0.88
NUP98-206ENST00000397013 TMCO2Q7Z6W1 182 aaPredicted RBP9.54□□□□□ -0.88
NUP98-206ENST00000397013 KBTBD3Q8NAB2 608 aa9.54□□□□□ -0.88
NUP98-206ENST00000397013 GMCL1P1Q8NEA9 526 aa9.54□□□□□ -0.88
NUP98-206ENST00000397013 NEDD1Q8NHV4 660 aa9.54□□□□□ -0.88
NUP98-206ENST00000397013 STAG1Q8WVM7 1258 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms