RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 KLHDC7AQ5VTJ3 777 aa15.5■□□□□ 0.07
NUP98-204ENST00000397004 PIK3R5Q8WYR1 880 aa15.5■□□□□ 0.07
NUP98-204ENST00000397004 SMARCC1Q92922 1105 aaPredicted RBP15.5■□□□□ 0.07
NUP98-204ENST00000397004 FGFBP2Q9BYJ0 223 aa15.5■□□□□ 0.07
NUP98-204ENST00000397004 ATP8A2Q9NTI2 1148 aa15.5■□□□□ 0.07
NUP98-204ENST00000397004 MAGEC2Q9UBF1 373 aaPredicted RBP15.5■□□□□ 0.07
NUP98-204ENST00000397004 ESYT3A0FGR9 886 aa15.49■□□□□ 0.07
NUP98-204ENST00000397004 PALM3A6NDB9 673 aaPredicted RBP15.49■□□□□ 0.07
NUP98-204ENST00000397004 GOLGA6CA6NDK9 693 aa15.49■□□□□ 0.07
NUP98-204ENST00000397004 GOLGA6DP0CG33 693 aa15.49■□□□□ 0.07
NUP98-204ENST00000397004 ASIC1P78348 528 aa15.49■□□□□ 0.07
NUP98-204ENST00000397004 POTEDQ86YR6 584 aa15.49■□□□□ 0.07
NUP98-204ENST00000397004 RETREG2Q8NC44 543 aa15.49■□□□□ 0.07
NUP98-204ENST00000397004 SH3RF3Q8TEJ3 882 aaPredicted RBP15.49■□□□□ 0.07
NUP98-204ENST00000397004 RPGRIP1Q96KN7 1286 aa15.49■□□□□ 0.07
NUP98-204ENST00000397004 CCDC42Q96M95 316 aa15.49■□□□□ 0.07
NUP98-204ENST00000397004 PNMA5Q96PV4 448 aa15.49■□□□□ 0.07
NUP98-204ENST00000397004 TMEM260Q9NX78 707 aa15.49■□□□□ 0.07
NUP98-204ENST00000397004 GOLGA6AQ9NYA3 693 aa15.49■□□□□ 0.07
NUP98-204ENST00000397004 SPATA31A5Q5VU36 1347 aa15.49■□□□□ 0.07
NUP98-204ENST00000397004 SPATA31A7Q8IWB4 1347 aa15.49■□□□□ 0.07
NUP98-204ENST00000397004 A0A0G2JS52 829 aa15.49■□□□□ 0.07
NUP98-204ENST00000397004 CCNT1O60563 726 aaKnown RBP15.49■□□□□ 0.07
NUP98-204ENST00000397004 KRT14P02533 472 aa15.49■□□□□ 0.07
NUP98-204ENST00000397004 CKAP4Q07065 602 aaKnown RBP15.49■□□□□ 0.07
NUP98-204ENST00000397004 ECM1Q16610 540 aa15.49■□□□□ 0.07
NUP98-204ENST00000397004 TMED8Q6PL24 325 aaPredicted RBP15.49■□□□□ 0.07
NUP98-204ENST00000397004 ANKS1AQ92625 1134 aa15.49■□□□□ 0.07
NUP98-204ENST00000397004 KANSL2Q9H9L4 492 aa15.49■□□□□ 0.07
NUP98-204ENST00000397004 SLC1A4P43007 532 aa15.49■□□□□ 0.07
NUP98-204ENST00000397004 GJA10Q969M2 543 aa15.49■□□□□ 0.07
NUP98-204ENST00000397004 TMEM47Q9BQJ4 181 aa15.49■□□□□ 0.07
NUP98-204ENST00000397004 NDST4Q9H3R1 872 aa15.49■□□□□ 0.07
NUP98-204ENST00000397004 KCNQ2O43526 872 aa15.49■□□□□ 0.07
NUP98-204ENST00000397004 BUB1O43683 1085 aa15.49■□□□□ 0.07
NUP98-204ENST00000397004 DIXDC1Q155Q3 683 aa15.49■□□□□ 0.07
NUP98-204ENST00000397004 MAP9Q49MG5 647 aa15.49■□□□□ 0.07
NUP98-204ENST00000397004 VWA3BQ502W6 1294 aa15.49■□□□□ 0.07
NUP98-204ENST00000397004 LRRC55Q6ZSA7 311 aa15.49■□□□□ 0.07
NUP98-204ENST00000397004 DGKHQ86XP1 1220 aa15.49■□□□□ 0.07
NUP98-204ENST00000397004 IPO4Q8TEX9 1081 aaKnown RBP15.49■□□□□ 0.07
NUP98-204ENST00000397004 PCMTD1Q96MG8 357 aaPredicted RBP15.49■□□□□ 0.07
NUP98-204ENST00000397004 CRACR2AQ9BSW2 395 aa15.49■□□□□ 0.07
NUP98-204ENST00000397004 NUP58Q9BVL2 599 aa15.49■□□□□ 0.07
NUP98-204ENST00000397004 CRNKL1Q9BZJ0 848 aaKnown RBP15.49■□□□□ 0.07
NUP98-204ENST00000397004 NOL4O94818 638 aa15.48■□□□□ 0.07
NUP98-204ENST00000397004 PRPHP41219 470 aa15.48■□□□□ 0.07
NUP98-204ENST00000397004 BICDL1Q6ZP65 573 aa15.48■□□□□ 0.07
NUP98-204ENST00000397004 ZMYND12Q9H0C1 365 aa15.48■□□□□ 0.07
NUP98-204ENST00000397004 ARPP21Q9UBL0 812 aaPredicted RBP15.48■□□□□ 0.07
NUP98-204ENST00000397004 ZNF831Q5JPB2 1677 aa15.48■□□□□ 0.07
NUP98-204ENST00000397004 CARSP49589 748 aaKnown RBP15.48■□□□□ 0.07
NUP98-204ENST00000397004 LRRC41Q15345 812 aa15.48■□□□□ 0.07
NUP98-204ENST00000397004 TSR1Q2NL82 804 aaKnown RBP15.48■□□□□ 0.07
NUP98-204ENST00000397004 FAM76AQ8TAV0 307 aa15.48■□□□□ 0.07
NUP98-204ENST00000397004 EFCC1Q9HA90 598 aa15.48■□□□□ 0.07
NUP98-204ENST00000397004 MYL1P05976 194 aa15.48■□□□□ 0.07
NUP98-204ENST00000397004 KIF5BP33176 963 aa15.48■□□□□ 0.07
NUP98-204ENST00000397004 FNBP4Q8N3X1 1017 aaPredicted RBP15.48■□□□□ 0.07
NUP98-204ENST00000397004 EHBP1Q8NDI1 1231 aa15.48■□□□□ 0.07
NUP98-204ENST00000397004 SAMM50Q9Y512 469 aa15.48■□□□□ 0.07
NUP98-204ENST00000397004 SLC37A4O43826 429 aa15.47■□□□□ 0.07
NUP98-204ENST00000397004 OR52Z1P0C646 297 aa15.47■□□□□ 0.07
NUP98-204ENST00000397004 RASSF7Q02833 373 aa15.47■□□□□ 0.07
NUP98-204ENST00000397004 RRAGAQ7L523 313 aa15.47■□□□□ 0.07
NUP98-204ENST00000397004 DYMQ7RTS9 669 aa15.47■□□□□ 0.07
NUP98-204ENST00000397004 MARCH10Q8NA82 808 aaPredicted RBP15.47■□□□□ 0.07
NUP98-204ENST00000397004 ZIM3Q96PE6 472 aa15.47■□□□□ 0.07
NUP98-204ENST00000397004 ACBD3Q9H3P7 528 aa15.47■□□□□ 0.07
NUP98-204ENST00000397004 ZNF233A6NK53 670 aa15.47■□□□□ 0.07
NUP98-204ENST00000397004 CPP00450 1065 aa15.47■□□□□ 0.07
NUP98-204ENST00000397004 KCTD16Q68DU8 428 aa15.47■□□□□ 0.07
NUP98-204ENST00000397004 USP17L2Q6R6M4 530 aa15.47■□□□□ 0.07
NUP98-204ENST00000397004 DNAAF5Q86Y56 855 aa15.47■□□□□ 0.07
NUP98-204ENST00000397004 TRIM58Q8NG06 486 aa15.47■□□□□ 0.07
NUP98-204ENST00000397004 PACSIN2Q9UNF0 486 aaPredicted RBP15.47■□□□□ 0.07
NUP98-204ENST00000397004 EIF3HO15372 352 aaKnown RBP eCLIP15.47■□□□□ 0.07
NUP98-204ENST00000397004 PRLRP16471 622 aa15.47■□□□□ 0.07
NUP98-204ENST00000397004 NOC3LQ8WTT2 800 aaKnown RBP15.47■□□□□ 0.07
NUP98-204ENST00000397004 ZNHIT6Q9NWK9 470 aaKnown RBP15.47■□□□□ 0.07
NUP98-204ENST00000397004 ITIH3Q06033 890 aa15.46■□□□□ 0.07
NUP98-204ENST00000397004 TBC1D9BQ66K14 1250 aa15.46■□□□□ 0.07
NUP98-204ENST00000397004 CDCA7Q9BWT1 371 aaPredicted RBP15.46■□□□□ 0.07
NUP98-204ENST00000397004 MMRN2Q9H8L6 949 aa15.46■□□□□ 0.07
NUP98-204ENST00000397004 COL5A3P25940 1745 aaPredicted RBP15.46■□□□□ 0.07
NUP98-204ENST00000397004 RASA1P20936 1047 aa15.46■□□□□ 0.07
NUP98-204ENST00000397004 EHHADHQ08426 723 aa15.46■□□□□ 0.07
NUP98-204ENST00000397004 TTC31Q49AM3 519 aaPredicted RBP15.46■□□□□ 0.07
NUP98-204ENST00000397004 KCNV1Q6PIU1 500 aa15.46■□□□□ 0.07
NUP98-204ENST00000397004 BARGINQ6ZT62 677 aa15.46■□□□□ 0.07
NUP98-204ENST00000397004 AMIGO3Q86WK7 504 aa15.46■□□□□ 0.07
NUP98-204ENST00000397004 MTMR9Q96QG7 549 aa15.46■□□□□ 0.07
NUP98-204ENST00000397004 STIM2Q9P246 746 aa15.46■□□□□ 0.07
NUP98-204ENST00000397004 LIG3P49916 1009 aa15.46■□□□□ 0.06
NUP98-204ENST00000397004 GNGT1P63211 74 aa15.46■□□□□ 0.06
NUP98-204ENST00000397004 PDCLQ13371 301 aa15.46■□□□□ 0.06
NUP98-204ENST00000397004 TADA2BQ86TJ2 420 aa15.46■□□□□ 0.06
NUP98-204ENST00000397004 AMOTL1Q8IY63 956 aa15.46■□□□□ 0.06
NUP98-204ENST00000397004 TBCKQ8TEA7 893 aa15.46■□□□□ 0.06
NUP98-204ENST00000397004 CAPS2Q9BXY5 557 aa15.46■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms