RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 IFIT3O14879 490 aaKnown RBP20.12■□□□□ 0.81
TNFSF13-205ENST00000396545 RAG1P15918 1043 aa20.12■□□□□ 0.81
TNFSF13-205ENST00000396545 EPHB4P54760 987 aa20.12■□□□□ 0.81
TNFSF13-205ENST00000396545 ZNF445P59923 1031 aa20.12■□□□□ 0.81
TNFSF13-205ENST00000396545 SMAD3P84022 425 aaKnown RBP20.12■□□□□ 0.81
TNFSF13-205ENST00000396545 TMEM67Q5HYA8 995 aa20.12■□□□□ 0.81
TNFSF13-205ENST00000396545 RRP12Q5JTH9 1297 aaKnown RBP20.12■□□□□ 0.81
TNFSF13-205ENST00000396545 CCDC144CPQ8IYA2 1237 aa20.12■□□□□ 0.81
TNFSF13-205ENST00000396545 FAM133AQ8N9E0 248 aa20.12■□□□□ 0.81
TNFSF13-205ENST00000396545 AGBL1Q96MI9 1066 aa20.12■□□□□ 0.81
TNFSF13-205ENST00000396545 UBAC1Q9BSL1 405 aa20.12■□□□□ 0.81
TNFSF13-205ENST00000396545 INCENPQ9NQS7 918 aa20.12■□□□□ 0.81
TNFSF13-205ENST00000396545 GPHNQ9NQX3 736 aaPredicted RBP20.12■□□□□ 0.81
TNFSF13-205ENST00000396545 TMEM39AQ9NV64 488 aa20.12■□□□□ 0.81
TNFSF13-205ENST00000396545 STX8Q9UNK0 236 aa20.12■□□□□ 0.81
TNFSF13-205ENST00000396545 PTPDC1A2A3K4 754 aa20.11■□□□□ 0.81
TNFSF13-205ENST00000396545 TSPY2A6NKD2 308 aa20.11■□□□□ 0.81
TNFSF13-205ENST00000396545 IRX5P78411 483 aaPredicted RBP20.11■□□□□ 0.81
TNFSF13-205ENST00000396545 CNTN2Q02246 1040 aa20.11■□□□□ 0.81
TNFSF13-205ENST00000396545 A1CFQ9NQ94 594 aaKnown RBP20.11■□□□□ 0.81
TNFSF13-205ENST00000396545 RNF146Q9NTX7 359 aa20.11■□□□□ 0.81
TNFSF13-205ENST00000396545 BRPF3Q9ULD4 1205 aa20.11■□□□□ 0.81
TNFSF13-205ENST00000396545 KIF3AQ9Y496 699 aa20.11■□□□□ 0.81
TNFSF13-205ENST00000396545 VCANP13611 3396 aa20.11■□□□□ 0.81
TNFSF13-205ENST00000396545 ELP1O95163 1332 aa20.11■□□□□ 0.81
TNFSF13-205ENST00000396545 DCDC2CA8MYV0 355 aa20.1■□□□□ 0.81
TNFSF13-205ENST00000396545 NMT2O60551 498 aa20.1■□□□□ 0.81
TNFSF13-205ENST00000396545 C6orf222P0C671 652 aaPredicted RBP20.1■□□□□ 0.81
TNFSF13-205ENST00000396545 NOVP48745 357 aa20.1■□□□□ 0.81
TNFSF13-205ENST00000396545 GJA9P57773 515 aa20.1■□□□□ 0.81
TNFSF13-205ENST00000396545 CAVIN1Q6NZI2 390 aaKnown RBP20.1■□□□□ 0.81
TNFSF13-205ENST00000396545 SYNE3Q6ZMZ3 975 aa20.1■□□□□ 0.81
TNFSF13-205ENST00000396545 PCSK9Q8NBP7 692 aaKnown RBP20.1■□□□□ 0.81
TNFSF13-205ENST00000396545 KLF18A0A0U1RQI7 1052 aa20.09■□□□□ 0.81
TNFSF13-205ENST00000396545 CCT2P78371 535 aaKnown RBP20.09■□□□□ 0.81
TNFSF13-205ENST00000396545 IKQ13123 557 aaPredicted RBP20.09■□□□□ 0.81
TNFSF13-205ENST00000396545 WTAPQ15007 396 aa20.09■□□□□ 0.81
TNFSF13-205ENST00000396545 CSPP1Q1MSJ5 1256 aa20.09■□□□□ 0.81
TNFSF13-205ENST00000396545 TKFCQ3LXA3 575 aa20.09■□□□□ 0.81
TNFSF13-205ENST00000396545 FOXD4L6Q3SYB3 417 aaPredicted RBP20.09■□□□□ 0.81
TNFSF13-205ENST00000396545 RCSD1Q6JBY9 416 aa20.09■□□□□ 0.81
TNFSF13-205ENST00000396545 FOXD4L3Q6VB84 417 aaPredicted RBP20.09■□□□□ 0.81
TNFSF13-205ENST00000396545 KCTD1Q719H9 257 aa20.09■□□□□ 0.81
TNFSF13-205ENST00000396545 RASGRP2Q7LDG7 609 aa20.09■□□□□ 0.81
TNFSF13-205ENST00000396545 RNPC3Q96LT9 517 aaKnown RBP20.09■□□□□ 0.81
TNFSF13-205ENST00000396545 GLT1D1Q96MS3 346 aa20.09■□□□□ 0.81
TNFSF13-205ENST00000396545 LY9Q9HBG7 655 aa20.09■□□□□ 0.81
TNFSF13-205ENST00000396545 SPC25Q9HBM1 224 aa20.09■□□□□ 0.81
TNFSF13-205ENST00000396545 GDPD2Q9HCC8 539 aa20.09■□□□□ 0.81
TNFSF13-205ENST00000396545 TBX21Q9UL17 535 aa20.09■□□□□ 0.81
TNFSF13-205ENST00000396545 CTAGE5O15320 804 aa20.08■□□□□ 0.81
TNFSF13-205ENST00000396545 RANBP6O60518 1105 aaKnown RBP20.08■□□□□ 0.81
TNFSF13-205ENST00000396545 ASGR1P07306 291 aa20.08■□□□□ 0.81
TNFSF13-205ENST00000396545 NCLP19338 710 aaKnown RBP20.08■□□□□ 0.81
TNFSF13-205ENST00000396545 CDK7P50613 346 aa20.08■□□□□ 0.81
TNFSF13-205ENST00000396545 NKX3-2P78367 333 aa20.08■□□□□ 0.81
TNFSF13-205ENST00000396545 DNM1Q05193 864 aaKnown RBP20.08■□□□□ 0.81
TNFSF13-205ENST00000396545 FPGSQ05932 587 aa20.08■□□□□ 0.81
TNFSF13-205ENST00000396545 PPP2R5BQ15173 497 aa20.08■□□□□ 0.81
TNFSF13-205ENST00000396545 ZSCAN23Q3MJ62 389 aa20.08■□□□□ 0.81
TNFSF13-205ENST00000396545 FAM184AQ8NB25 1140 aa20.08■□□□□ 0.81
TNFSF13-205ENST00000396545 CDX2Q99626 313 aaPredicted RBP20.08■□□□□ 0.81
TNFSF13-205ENST00000396545 SEMA6BQ9H3T3 888 aa20.08■□□□□ 0.81
TNFSF13-205ENST00000396545 NCOA5Q9HCD5 579 aaKnown RBP20.08■□□□□ 0.81
TNFSF13-205ENST00000396545 MROH7Q68CQ1 1323 aa20.08■□□□□ 0.81
TNFSF13-205ENST00000396545 SOWAHBA6NEL2 793 aa20.08■□□□□ 0.8
TNFSF13-205ENST00000396545 CCDC69A6NI79 296 aa20.08■□□□□ 0.8
TNFSF13-205ENST00000396545 MRE11P49959 708 aa20.08■□□□□ 0.8
TNFSF13-205ENST00000396545 NFXL1Q6ZNB6 911 aa20.08■□□□□ 0.8
TNFSF13-205ENST00000396545 GAS2L3Q86XJ1 694 aa20.08■□□□□ 0.8
TNFSF13-205ENST00000396545 TRERF1Q96PN7 1200 aa20.08■□□□□ 0.8
TNFSF13-205ENST00000396545 ZSCAN10Q96SZ4 725 aaPredicted RBP20.08■□□□□ 0.8
TNFSF13-205ENST00000396545 TTYH1Q9H313 450 aaPredicted RBP20.08■□□□□ 0.8
TNFSF13-205ENST00000396545 PRR12Q9ULL5 1215 aa20.08■□□□□ 0.8
TNFSF13-205ENST00000396545 ASTN1O14525 1302 aa20.07■□□□□ 0.8
TNFSF13-205ENST00000396545 TCHHQ07283 1943 aa20.07■□□□□ 0.8
TNFSF13-205ENST00000396545 LRRC37A2A6NM11 1700 aa20.07■□□□□ 0.8
TNFSF13-205ENST00000396545 GADD45BO75293 160 aaPredicted RBP20.07■□□□□ 0.8
TNFSF13-205ENST00000396545 TIMP1P01033 207 aa20.07■□□□□ 0.8
TNFSF13-205ENST00000396545 RESTQ13127 1097 aa20.07■□□□□ 0.8
TNFSF13-205ENST00000396545 GNASQ5JWF2 1037 aa20.07■□□□□ 0.8
TNFSF13-205ENST00000396545 CPLX2Q6PUV4 134 aaKnown RBP20.07■□□□□ 0.8
TNFSF13-205ENST00000396545 APOA5Q6Q788 366 aa20.07■□□□□ 0.8
TNFSF13-205ENST00000396545 TCP11L1Q9NUJ3 509 aa20.07■□□□□ 0.8
TNFSF13-205ENST00000396545 TMEM63CQ9P1W3 806 aa20.07■□□□□ 0.8
TNFSF13-205ENST00000396545 SLC12A7Q9Y666 1083 aa20.07■□□□□ 0.8
TNFSF13-205ENST00000396545 ASB14A6NK59 587 aa20.06■□□□□ 0.8
TNFSF13-205ENST00000396545 GOLGA8BA8MQT2 603 aa20.06■□□□□ 0.8
TNFSF13-205ENST00000396545 ALAS1P13196 640 aa20.06■□□□□ 0.8
TNFSF13-205ENST00000396545 SNAP25P60880 206 aa20.06■□□□□ 0.8
TNFSF13-205ENST00000396545 UBE2HP62256 183 aa20.06■□□□□ 0.8
TNFSF13-205ENST00000396545 SEC23AQ15436 765 aa20.06■□□□□ 0.8
TNFSF13-205ENST00000396545 CCDC174Q6PII3 467 aa20.06■□□□□ 0.8
TNFSF13-205ENST00000396545 NAP1L2Q9ULW6 460 aaPredicted RBP20.06■□□□□ 0.8
TNFSF13-205ENST00000396545 NID2Q14112 1375 aa20.06■□□□□ 0.8
TNFSF13-205ENST00000396545 A0A0U1RQG5 324 aaPredicted RBP20.05■□□□□ 0.8
TNFSF13-205ENST00000396545 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.05■□□□□ 0.8
TNFSF13-205ENST00000396545 ARVCFO00192 962 aa20.05■□□□□ 0.8
TNFSF13-205ENST00000396545 ZBTB43O43298 467 aa20.05■□□□□ 0.8
TNFSF13-205ENST00000396545 CDKL5O76039 1030 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms