RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 DDX12PQ92771 950 aa9.26□□□□□ -0.93
NDE1-202ENST00000396355 ELAC2Q9BQ52 826 aaKnown RBP9.26□□□□□ -0.93
NDE1-202ENST00000396355 NCOA5Q9HCD5 579 aaKnown RBP9.26□□□□□ -0.93
NDE1-202ENST00000396355 MAST3O60307 1309 aa9.26□□□□□ -0.93
NDE1-202ENST00000396355 SALL1Q9NSC2 1324 aa9.26□□□□□ -0.93
NDE1-202ENST00000396355 CTNND1O60716 968 aaKnown RBP9.25□□□□□ -0.93
NDE1-202ENST00000396355 FAM200BP0CF97 657 aa9.25□□□□□ -0.93
NDE1-202ENST00000396355 GYS1P13807 737 aa9.25□□□□□ -0.93
NDE1-202ENST00000396355 LMNB1P20700 586 aa9.25□□□□□ -0.93
NDE1-202ENST00000396355 GET4Q7L5D6 327 aaPredicted RBP9.25□□□□□ -0.93
NDE1-202ENST00000396355 FAM133AQ8N9E0 248 aa9.25□□□□□ -0.93
NDE1-202ENST00000396355 CCDC197Q8NCU1 140 aa9.25□□□□□ -0.93
NDE1-202ENST00000396355 STMN2Q93045 179 aa9.25□□□□□ -0.93
NDE1-202ENST00000396355 YIPF2Q9BWQ6 316 aa9.25□□□□□ -0.93
NDE1-202ENST00000396355 SPZ1Q9BXG8 430 aa9.25□□□□□ -0.93
NDE1-202ENST00000396355 NDEL1Q9GZM8 345 aa9.25□□□□□ -0.93
NDE1-202ENST00000396355 ZBTB3Q9H5J0 574 aa9.25□□□□□ -0.93
NDE1-202ENST00000396355 ATP6V0A4Q9HBG4 840 aa9.25□□□□□ -0.93
NDE1-202ENST00000396355 PAG1Q9NWQ8 432 aa9.25□□□□□ -0.93
NDE1-202ENST00000396355 A6NNZ2 444 aa9.25□□□□□ -0.93
NDE1-202ENST00000396355 G3V3G9 751 aa9.25□□□□□ -0.93
NDE1-202ENST00000396355 STXBP3O00186 592 aa9.25□□□□□ -0.93
NDE1-202ENST00000396355 BAG2O95816 211 aa9.25□□□□□ -0.93
NDE1-202ENST00000396355 RAD23BP54727 409 aa9.25□□□□□ -0.93
NDE1-202ENST00000396355 GUCY2DQ02846 1103 aa9.25□□□□□ -0.93
NDE1-202ENST00000396355 CUL4BQ13620 913 aa9.25□□□□□ -0.93
NDE1-202ENST00000396355 TUBB8Q3ZCM7 444 aa9.25□□□□□ -0.93
NDE1-202ENST00000396355 TDRD12Q587J7 1177 aaKnown RBP9.25□□□□□ -0.93
NDE1-202ENST00000396355 DCAF8Q5TAQ9 597 aa9.25□□□□□ -0.93
NDE1-202ENST00000396355 NAA35Q5VZE5 725 aa9.25□□□□□ -0.93
NDE1-202ENST00000396355 CCDC102BQ68D86 513 aa9.25□□□□□ -0.93
NDE1-202ENST00000396355 GALNT17Q6IS24 598 aa9.25□□□□□ -0.93
NDE1-202ENST00000396355 RCSD1Q6JBY9 416 aa9.25□□□□□ -0.93
NDE1-202ENST00000396355 COG1Q8WTW3 980 aa9.25□□□□□ -0.93
NDE1-202ENST00000396355 HIC2Q96JB3 615 aa9.25□□□□□ -0.93
NDE1-202ENST00000396355 MAF1Q9H063 256 aa9.25□□□□□ -0.93
NDE1-202ENST00000396355 NSRP1Q9H0G5 558 aaKnown RBP9.25□□□□□ -0.93
NDE1-202ENST00000396355 GPHNQ9NQX3 736 aaPredicted RBP9.25□□□□□ -0.93
NDE1-202ENST00000396355 ESYT3A0FGR9 886 aa9.25□□□□□ -0.93
NDE1-202ENST00000396355 AKR1B10O60218 316 aa9.25□□□□□ -0.93
NDE1-202ENST00000396355 KRT32Q14532 448 aa9.25□□□□□ -0.93
NDE1-202ENST00000396355 INTS8Q75QN2 995 aaKnown RBP9.25□□□□□ -0.93
NDE1-202ENST00000396355 BZW1Q7L1Q6 419 aaKnown RBP9.25□□□□□ -0.93
NDE1-202ENST00000396355 PAF1Q8N7H5 531 aa9.25□□□□□ -0.93
NDE1-202ENST00000396355 MAIP1Q8WWC4 291 aa9.25□□□□□ -0.93
NDE1-202ENST00000396355 PLVAPQ9BX97 442 aa9.25□□□□□ -0.93
NDE1-202ENST00000396355 NAA15Q9BXJ9 866 aaKnown RBP9.25□□□□□ -0.93
NDE1-202ENST00000396355 AGXT2Q9BYV1 514 aa9.25□□□□□ -0.93
NDE1-202ENST00000396355 TSPYL2Q9H2G4 693 aaPredicted RBP9.25□□□□□ -0.93
NDE1-202ENST00000396355 U3KPZ7 1027 aaPredicted RBP9.25□□□□□ -0.93
NDE1-202ENST00000396355 PHF20L1A8MW92 1017 aa9.24□□□□□ -0.93
NDE1-202ENST00000396355 KRT86O43790 486 aa9.24□□□□□ -0.93
NDE1-202ENST00000396355 TACC1O75410 805 aa9.24□□□□□ -0.93
NDE1-202ENST00000396355 MYL1P05976 194 aa9.24□□□□□ -0.93
NDE1-202ENST00000396355 HSPD1P10809 573 aaKnown RBP9.24□□□□□ -0.93
NDE1-202ENST00000396355 LSP1P33241 339 aa9.24□□□□□ -0.93
NDE1-202ENST00000396355 RAB27AP51159 221 aa9.24□□□□□ -0.93
NDE1-202ENST00000396355 ZNF131P52739 623 aa9.24□□□□□ -0.93
NDE1-202ENST00000396355 EXOSC10Q01780 885 aaKnown RBP9.24□□□□□ -0.93
NDE1-202ENST00000396355 P3H1Q32P28 736 aa9.24□□□□□ -0.93
NDE1-202ENST00000396355 SPATA24Q86W54 205 aa9.24□□□□□ -0.93
NDE1-202ENST00000396355 LRRC43Q8N309 656 aa9.24□□□□□ -0.93
NDE1-202ENST00000396355 JAKMIP2Q96AA8 810 aa9.24□□□□□ -0.93
NDE1-202ENST00000396355 GPR101Q96P66 508 aaPredicted RBP9.24□□□□□ -0.93
NDE1-202ENST00000396355 NR1H4Q96RI1 486 aaPredicted RBP9.24□□□□□ -0.93
NDE1-202ENST00000396355 TANGO6Q9C0B7 1094 aa9.24□□□□□ -0.93
NDE1-202ENST00000396355 KIAA1468Q9P260 1216 aa9.24□□□□□ -0.93
NDE1-202ENST00000396355 KRT9P35527 623 aa9.24□□□□□ -0.93
NDE1-202ENST00000396355 ADCY1Q08828 1119 aa9.24□□□□□ -0.93
NDE1-202ENST00000396355 KIF5AQ12840 1032 aa9.24□□□□□ -0.93
NDE1-202ENST00000396355 MAP3K12Q12852 859 aa9.24□□□□□ -0.93
NDE1-202ENST00000396355 KCTD21Q4G0X4 260 aa9.24□□□□□ -0.93
NDE1-202ENST00000396355 ZMYM1Q5SVZ6 1142 aa9.24□□□□□ -0.93
NDE1-202ENST00000396355 RALYLQ86SE5 291 aaKnown RBP9.24□□□□□ -0.93
NDE1-202ENST00000396355 CNBD1Q8NA66 436 aa9.24□□□□□ -0.93
NDE1-202ENST00000396355 PHC3Q8NDX5 983 aa9.24□□□□□ -0.93
NDE1-202ENST00000396355 RBM46Q8TBY0 533 aaKnown RBP9.24□□□□□ -0.93
NDE1-202ENST00000396355 GOLPH3LQ9H4A5 285 aa9.24□□□□□ -0.93
NDE1-202ENST00000396355 ZNF408Q9H9D4 720 aa9.24□□□□□ -0.93
NDE1-202ENST00000396355 SPEF2Q9C093 1822 aa9.24□□□□□ -0.93
NDE1-202ENST00000396355 MYH7P12883 1935 aa9.24□□□□□ -0.93
NDE1-202ENST00000396355 BCL9O00512 1426 aa9.24□□□□□ -0.93
NDE1-202ENST00000396355 PFKFB2O60825 505 aa9.24□□□□□ -0.93
NDE1-202ENST00000396355 HSPA1AP0DMV8 641 aaKnown RBP9.24□□□□□ -0.93
NDE1-202ENST00000396355 HSPA1BP0DMV9 641 aaKnown RBP9.24□□□□□ -0.93
NDE1-202ENST00000396355 CTNNA1P35221 906 aaKnown RBP9.24□□□□□ -0.93
NDE1-202ENST00000396355 COL13A1Q5TAT6 717 aaPredicted RBP9.24□□□□□ -0.93
NDE1-202ENST00000396355 FUKQ8N0W3 1084 aa9.24□□□□□ -0.93
NDE1-202ENST00000396355 ANKRD13CQ8N6S4 541 aa9.24□□□□□ -0.93
NDE1-202ENST00000396355 ANKRD42Q8N9B4 389 aa9.24□□□□□ -0.93
NDE1-202ENST00000396355 CEP63Q96MT8 703 aa9.24□□□□□ -0.93
NDE1-202ENST00000396355 SIKE1Q9BRV8 207 aa9.24□□□□□ -0.93
NDE1-202ENST00000396355 CENPOQ9BU64 300 aa9.24□□□□□ -0.93
NDE1-202ENST00000396355 RABL2BQ9UNT1 228 aa9.24□□□□□ -0.93
NDE1-202ENST00000396355 PTPDC1A2A3K4 754 aa9.24□□□□□ -0.93
NDE1-202ENST00000396355 E7EWF7 191 aa9.24□□□□□ -0.93
NDE1-202ENST00000396355 SPTLC2O15270 562 aa9.24□□□□□ -0.93
NDE1-202ENST00000396355 TMOD1P28289 359 aa9.24□□□□□ -0.93
NDE1-202ENST00000396355 MSH2P43246 934 aa9.24□□□□□ -0.93
NDE1-202ENST00000396355 SCARF1Q14162 830 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms