RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 SLC37A4O43826 429 aa23.16■■□□□ 1.3
VCPKMT-202ENST00000395860 TOMM70O94826 608 aa23.16■■□□□ 1.3
VCPKMT-202ENST00000395860 PRPHP41219 470 aa23.16■■□□□ 1.3
VCPKMT-202ENST00000395860 FAM160A1Q05DH4 1040 aa23.16■■□□□ 1.3
VCPKMT-202ENST00000395860 SPECC1Q5M775 1068 aa23.16■■□□□ 1.3
VCPKMT-202ENST00000395860 MOXD1Q6UVY6 613 aa23.16■■□□□ 1.3
VCPKMT-202ENST00000395860 RIOX2Q8IUF8 465 aa23.16■■□□□ 1.3
VCPKMT-202ENST00000395860 SPATC1LQ9H0A9 340 aa23.16■■□□□ 1.3
VCPKMT-202ENST00000395860 PEX10O60683 326 aa23.15■■□□□ 1.3
VCPKMT-202ENST00000395860 PFKFB1P16118 471 aa23.15■■□□□ 1.3
VCPKMT-202ENST00000395860 NDUFA8P51970 172 aa23.15■■□□□ 1.3
VCPKMT-202ENST00000395860 CALCRLQ16602 461 aa23.15■■□□□ 1.3
VCPKMT-202ENST00000395860 DTHD1Q6ZMT9 781 aa23.15■■□□□ 1.3
VCPKMT-202ENST00000395860 CHST13Q8NET6 341 aa23.15■■□□□ 1.3
VCPKMT-202ENST00000395860 SYTL5Q8TDW5 730 aaPredicted RBP23.15■■□□□ 1.3
VCPKMT-202ENST00000395860 DDX19AQ9NUU7 478 aaKnown RBP23.15■■□□□ 1.3
VCPKMT-202ENST00000395860 FAM13BQ9NYF5 915 aa23.15■■□□□ 1.3
VCPKMT-202ENST00000395860 COL20A1Q9P218 1284 aa23.15■■□□□ 1.3
VCPKMT-202ENST00000395860 TLL2Q9Y6L7 1015 aa23.15■■□□□ 1.3
VCPKMT-202ENST00000395860 CYP3A4P08684 503 aa23.14■■□□□ 1.3
VCPKMT-202ENST00000395860 CCDC183Q5T5S1 534 aa23.14■■□□□ 1.3
VCPKMT-202ENST00000395860 SLC30A10Q6XR72 485 aa23.14■■□□□ 1.3
VCPKMT-202ENST00000395860 GTF3C2Q8WUA4 911 aaPredicted RBP23.14■■□□□ 1.3
VCPKMT-202ENST00000395860 RABGAP1Q9Y3P9 1069 aa23.14■■□□□ 1.3
VCPKMT-202ENST00000395860 CYP3A7-CYP3A51PA0A087WV96 503 aa23.14■■□□□ 1.29
VCPKMT-202ENST00000395860 CNMDO75829 334 aa23.14■■□□□ 1.29
VCPKMT-202ENST00000395860 CYP2C8P10632 490 aa23.14■■□□□ 1.29
VCPKMT-202ENST00000395860 CYP3A7P24462 503 aa23.14■■□□□ 1.29
VCPKMT-202ENST00000395860 ZNF76P36508 570 aa23.14■■□□□ 1.29
VCPKMT-202ENST00000395860 BAATQ14032 418 aaPredicted RBP23.14■■□□□ 1.29
VCPKMT-202ENST00000395860 IL17AQ16552 155 aa23.14■■□□□ 1.29
VCPKMT-202ENST00000395860 ENGASEQ8NFI3 743 aa23.14■■□□□ 1.29
VCPKMT-202ENST00000395860 SMCR8Q8TEV9 937 aaPredicted RBP23.14■■□□□ 1.29
VCPKMT-202ENST00000395860 RBPJLQ9UBG7 517 aa23.14■■□□□ 1.29
VCPKMT-202ENST00000395860 ABT1Q9ULW3 272 aaKnown RBP23.14■■□□□ 1.29
VCPKMT-202ENST00000395860 UBXN2AP68543 259 aa23.13■■□□□ 1.29
VCPKMT-202ENST00000395860 SNW1Q13573 536 aaKnown RBP23.13■■□□□ 1.29
VCPKMT-202ENST00000395860 MAF1Q9H063 256 aa23.13■■□□□ 1.29
VCPKMT-202ENST00000395860 FBXO40Q9UH90 709 aa23.13■■□□□ 1.29
VCPKMT-202ENST00000395860 CIITAP33076 1130 aa23.12■■□□□ 1.29
VCPKMT-202ENST00000395860 LONP1P36776 959 aaKnown RBP23.12■■□□□ 1.29
VCPKMT-202ENST00000395860 ZSCAN23Q3MJ62 389 aa23.12■■□□□ 1.29
VCPKMT-202ENST00000395860 NCAPG2Q86XI2 1143 aa23.12■■□□□ 1.29
VCPKMT-202ENST00000395860 FMR1NBQ8N0W7 255 aaPredicted RBP23.12■■□□□ 1.29
VCPKMT-202ENST00000395860 FAM43AQ8N2R8 423 aa23.12■■□□□ 1.29
VCPKMT-202ENST00000395860 MBOAT7Q96N66 472 aa23.12■■□□□ 1.29
VCPKMT-202ENST00000395860 MTMR9Q96QG7 549 aa23.12■■□□□ 1.29
VCPKMT-202ENST00000395860 TXNRD2Q9NNW7 524 aa23.12■■□□□ 1.29
VCPKMT-202ENST00000395860 HPSEQ9Y251 543 aa23.12■■□□□ 1.29
VCPKMT-202ENST00000395860 FAM237AA0A1B0GTK4 181 aa23.12■■□□□ 1.29
VCPKMT-202ENST00000395860 TMEM88BA6NKF7 163 aa23.12■■□□□ 1.29
VCPKMT-202ENST00000395860 MARCH6O60337 910 aa23.12■■□□□ 1.29
VCPKMT-202ENST00000395860 KINO60870 393 aaKnown RBP23.12■■□□□ 1.29
VCPKMT-202ENST00000395860 SYKP43405 635 aa23.12■■□□□ 1.29
VCPKMT-202ENST00000395860 TAAR1Q96RJ0 339 aa23.12■■□□□ 1.29
VCPKMT-202ENST00000395860 MOV10L1Q9BXT6 1211 aaKnown RBP23.12■■□□□ 1.29
VCPKMT-202ENST00000395860 NUP62CLQ9H1M0 184 aa23.12■■□□□ 1.29
VCPKMT-202ENST00000395860 A1CFQ9NQ94 594 aaKnown RBP23.12■■□□□ 1.29
VCPKMT-202ENST00000395860 RPTORQ8N122 1335 aa23.11■■□□□ 1.29
VCPKMT-202ENST00000395860 MANSC4A6NHS7 340 aaPredicted RBP23.11■■□□□ 1.29
VCPKMT-202ENST00000395860 SLC25A27O95847 323 aa23.11■■□□□ 1.29
VCPKMT-202ENST00000395860 SLC10A3P09131 477 aa23.11■■□□□ 1.29
VCPKMT-202ENST00000395860 COPB2P35606 906 aa23.11■■□□□ 1.29
VCPKMT-202ENST00000395860 TXKP42681 527 aa23.11■■□□□ 1.29
VCPKMT-202ENST00000395860 Q4G0T1 1027 aa23.11■■□□□ 1.29
VCPKMT-202ENST00000395860 PRR16Q569H4 304 aa23.11■■□□□ 1.29
VCPKMT-202ENST00000395860 SYMPKQ92797 1274 aaKnown RBP23.11■■□□□ 1.29
VCPKMT-202ENST00000395860 PTPN18Q99952 460 aa23.11■■□□□ 1.29
VCPKMT-202ENST00000395860 CYP39A1Q9NYL5 469 aa23.11■■□□□ 1.29
VCPKMT-202ENST00000395860 KCNH3Q9ULD8 1083 aa23.11■■□□□ 1.29
VCPKMT-202ENST00000395860 TESPA1A2RU30 521 aaPredicted RBP23.1■■□□□ 1.29
VCPKMT-202ENST00000395860 FAM86B1E9PN63 330 aa23.1■■□□□ 1.29
VCPKMT-202ENST00000395860 FAM86B2P0C5J1 330 aa23.1■■□□□ 1.29
VCPKMT-202ENST00000395860 EPSTI1Q96J88 318 aa23.1■■□□□ 1.29
VCPKMT-202ENST00000395860 RMDN3Q96TC7 470 aa23.1■■□□□ 1.29
VCPKMT-202ENST00000395860 LCTP09848 1927 aa23.1■■□□□ 1.29
VCPKMT-202ENST00000395860 ZNF202O95125 648 aa23.09■■□□□ 1.29
VCPKMT-202ENST00000395860 YY1P25490 414 aa23.09■■□□□ 1.29
VCPKMT-202ENST00000395860 ERVK-9P63128 1117 aa23.09■■□□□ 1.29
VCPKMT-202ENST00000395860 ERVK-24P63145 666 aa23.09■■□□□ 1.29
VCPKMT-202ENST00000395860 TMEM266Q2M3C6 531 aa23.09■■□□□ 1.29
VCPKMT-202ENST00000395860 Q3C1V9 767 aa23.09■■□□□ 1.29
VCPKMT-202ENST00000395860 USP49Q70CQ1 688 aa23.09■■□□□ 1.29
VCPKMT-202ENST00000395860 ANKRD35Q8N283 1001 aa23.09■■□□□ 1.29
VCPKMT-202ENST00000395860 CCDC102AQ96A19 550 aa23.09■■□□□ 1.29
VCPKMT-202ENST00000395860 PARK7Q99497 189 aaKnown RBP23.09■■□□□ 1.29
VCPKMT-202ENST00000395860 CLSTN2Q9H4D0 955 aa23.09■■□□□ 1.29
VCPKMT-202ENST00000395860 FRMPD4Q14CM0 1322 aa23.09■■□□□ 1.29
VCPKMT-202ENST00000395860 ERCC3P19447 782 aa23.09■■□□□ 1.29
VCPKMT-202ENST00000395860 TECP42680 631 aa23.09■■□□□ 1.29
VCPKMT-202ENST00000395860 FSTL1Q12841 308 aa23.09■■□□□ 1.29
VCPKMT-202ENST00000395860 CAMK4Q16566 473 aa23.09■■□□□ 1.29
VCPKMT-202ENST00000395860 ARHGEF16Q5VV41 709 aa23.09■■□□□ 1.29
VCPKMT-202ENST00000395860 TNMDQ9H2S6 317 aa23.09■■□□□ 1.29
VCPKMT-202ENST00000395860 PXMP2Q9NR77 195 aa23.09■■□□□ 1.29
VCPKMT-202ENST00000395860 PFASO15067 1338 aa23.09■■□□□ 1.29
VCPKMT-202ENST00000395860 LETM1O95202 739 aaPredicted RBP23.08■■□□□ 1.29
VCPKMT-202ENST00000395860 EIF2AK2P19525 551 aaKnown RBP23.08■■□□□ 1.29
VCPKMT-202ENST00000395860 GCLCP48506 637 aaPredicted RBP23.08■■□□□ 1.29
VCPKMT-202ENST00000395860 PGM5Q15124 567 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms