RNA–Protein interactions for RNA: ENST00000395636.6

PHACTR3-205, Transcript of phosphatase and actin regulator 3, humanhuman

TSL 1 (best) BASIC

Gene PHACTR3, Length 2,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3-205ENST00000395636 FERMT2Q96AC1 680 aa13.35□□□□□ -0.27
PHACTR3-205ENST00000395636 CSRNP2Q9H175 543 aa13.35□□□□□ -0.27
PHACTR3-205ENST00000395636 VIPAS39Q9H9C1 493 aa13.35□□□□□ -0.27
PHACTR3-205ENST00000395636 MAN1B1Q9UKM7 699 aa13.35□□□□□ -0.27
PHACTR3-205ENST00000395636 SH3BP1Q9Y3L3 701 aa13.35□□□□□ -0.27
PHACTR3-205ENST00000395636 CNTNAP5Q8WYK1 1306 aa13.34□□□□□ -0.27
PHACTR3-205ENST00000395636 VWA3AA6NCI4 1184 aa13.34□□□□□ -0.27
PHACTR3-205ENST00000395636 MPHOSPH10O00566 681 aaKnown RBP13.34□□□□□ -0.27
PHACTR3-205ENST00000395636 FANCGO15287 622 aa13.34□□□□□ -0.27
PHACTR3-205ENST00000395636 DLGAP5Q15398 846 aa13.34□□□□□ -0.27
PHACTR3-205ENST00000395636 CIAPIN1Q6FI81 312 aa13.34□□□□□ -0.27
PHACTR3-205ENST00000395636 USP17L2Q6R6M4 530 aa13.34□□□□□ -0.27
PHACTR3-205ENST00000395636 OGFOD1Q8N543 542 aa13.34□□□□□ -0.27
PHACTR3-205ENST00000395636 SPON1Q9HCB6 807 aa13.34□□□□□ -0.27
PHACTR3-205ENST00000395636 TCP11L1Q9NUJ3 509 aa13.34□□□□□ -0.27
PHACTR3-205ENST00000395636 MAD2L2Q9UI95 211 aa13.34□□□□□ -0.27
PHACTR3-205ENST00000395636 GJA3Q9Y6H8 435 aa13.34□□□□□ -0.27
PHACTR3-205ENST00000395636 FOXN1O15353 648 aa13.34□□□□□ -0.27
PHACTR3-205ENST00000395636 GDF11O95390 407 aa13.34□□□□□ -0.27
PHACTR3-205ENST00000395636 ATP1A3P13637 1013 aa13.34□□□□□ -0.27
PHACTR3-205ENST00000395636 KIF5BP33176 963 aa13.34□□□□□ -0.27
PHACTR3-205ENST00000395636 SARSP49591 514 aaKnown RBP13.34□□□□□ -0.27
PHACTR3-205ENST00000395636 SEMA3FQ13275 785 aa13.34□□□□□ -0.27
PHACTR3-205ENST00000395636 PREPLQ4J6C6 727 aaPredicted RBP13.34□□□□□ -0.27
PHACTR3-205ENST00000395636 ANKS1AQ92625 1134 aa13.34□□□□□ -0.27
PHACTR3-205ENST00000395636 N4BP2L2Q92802 583 aaPredicted RBP13.34□□□□□ -0.27
PHACTR3-205ENST00000395636 TMEM39BQ9GZU3 492 aa13.34□□□□□ -0.27
PHACTR3-205ENST00000395636 ZNF70Q9UC06 446 aaPredicted RBP13.34□□□□□ -0.27
PHACTR3-205ENST00000395636 PPP2R2CQ9Y2T4 447 aa13.34□□□□□ -0.27
PHACTR3-205ENST00000395636 ATXN2Q99700 1313 aaKnown RBP13.33□□□□□ -0.28
PHACTR3-205ENST00000395636 ZNF541Q9H0D2 1346 aa13.33□□□□□ -0.28
PHACTR3-205ENST00000395636 ACTN4O43707 911 aaKnown RBP13.33□□□□□ -0.28
PHACTR3-205ENST00000395636 CYTH3O43739 400 aa13.33□□□□□ -0.28
PHACTR3-205ENST00000395636 FAM43BQ6ZT52 329 aaPredicted RBP13.33□□□□□ -0.28
PHACTR3-205ENST00000395636 SAMD7Q7Z3H4 446 aa13.33□□□□□ -0.28
PHACTR3-205ENST00000395636 TRIM6Q9C030 488 aaPredicted RBP13.33□□□□□ -0.28
PHACTR3-205ENST00000395636 PLEKHA4Q9H4M7 779 aa13.33□□□□□ -0.28
PHACTR3-205ENST00000395636 ABCB6Q9NP58 842 aa13.33□□□□□ -0.28
PHACTR3-205ENST00000395636 MTMR4Q9NYA4 1195 aa13.33□□□□□ -0.28
PHACTR3-205ENST00000395636 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.33□□□□□ -0.28
PHACTR3-205ENST00000395636 ARFGEF1Q9Y6D6 1849 aa13.33□□□□□ -0.28
PHACTR3-205ENST00000395636 CNTNAP1P78357 1384 aa13.33□□□□□ -0.28
PHACTR3-205ENST00000395636 USP17L5A8MUK1 530 aa13.32□□□□□ -0.28
PHACTR3-205ENST00000395636 WNT10BO00744 389 aa13.32□□□□□ -0.28
PHACTR3-205ENST00000395636 HLA-DOAP06340 250 aa13.32□□□□□ -0.28
PHACTR3-205ENST00000395636 SCG2P13521 617 aa13.32□□□□□ -0.28
PHACTR3-205ENST00000395636 BMP6P22004 513 aa13.32□□□□□ -0.28
PHACTR3-205ENST00000395636 ATP2B2Q01814 1243 aa13.32□□□□□ -0.28
PHACTR3-205ENST00000395636 MORC3Q14149 939 aa13.32□□□□□ -0.28
PHACTR3-205ENST00000395636 CCDC178Q5BJE1 867 aa13.32□□□□□ -0.28
PHACTR3-205ENST00000395636 TNFRSF25Q93038 417 aa13.32□□□□□ -0.28
PHACTR3-205ENST00000395636 CSRNP1Q96S65 589 aa13.32□□□□□ -0.28
PHACTR3-205ENST00000395636 ANKZF1Q9H8Y5 726 aa13.32□□□□□ -0.28
PHACTR3-205ENST00000395636 ZNF287Q9HBT7 754 aa13.32□□□□□ -0.28
PHACTR3-205ENST00000395636 FANCLQ9NW38 375 aa13.32□□□□□ -0.28
PHACTR3-205ENST00000395636 MYH4Q9Y623 1939 aa13.32□□□□□ -0.28
PHACTR3-205ENST00000395636 MYO3BQ8WXR4 1341 aa13.32□□□□□ -0.28
PHACTR3-205ENST00000395636 IGKV6D-41A0A0C4DH26 115 aa13.32□□□□□ -0.28
PHACTR3-205ENST00000395636 FAM205CA6NFA0 338 aa13.32□□□□□ -0.28
PHACTR3-205ENST00000395636 SHOX2O60902 331 aaPredicted RBP13.32□□□□□ -0.28
PHACTR3-205ENST00000395636 TRAPPC10P48553 1259 aa13.32□□□□□ -0.28
PHACTR3-205ENST00000395636 AARSP49588 968 aaKnown RBP eCLIP13.32□□□□□ -0.28
PHACTR3-205ENST00000395636 MRPL12P52815 198 aaKnown RBP13.32□□□□□ -0.28
PHACTR3-205ENST00000395636 TTC38Q5R3I4 469 aa13.32□□□□□ -0.28
PHACTR3-205ENST00000395636 ARHGAP27Q6ZUM4 889 aa13.32□□□□□ -0.28
PHACTR3-205ENST00000395636 SPATS2Q86XZ4 545 aaKnown RBP13.32□□□□□ -0.28
PHACTR3-205ENST00000395636 PDILTQ8N807 584 aa13.32□□□□□ -0.28
PHACTR3-205ENST00000395636 ENOX1Q8TC92 643 aaKnown RBP13.32□□□□□ -0.28
PHACTR3-205ENST00000395636 VPS33BQ9H267 617 aa13.32□□□□□ -0.28
PHACTR3-205ENST00000395636 PI4KBQ9UBF8 816 aa13.32□□□□□ -0.28
PHACTR3-205ENST00000395636 A0A1B0GUA9 196 aa13.31□□□□□ -0.28
PHACTR3-205ENST00000395636 ANKRD33BA6NCL7 494 aa13.31□□□□□ -0.28
PHACTR3-205ENST00000395636 RNF40O75150 1001 aa13.31□□□□□ -0.28
PHACTR3-205ENST00000395636 GMPSP49915 693 aaPredicted RBP13.31□□□□□ -0.28
PHACTR3-205ENST00000395636 NLRP5P59047 1200 aa13.31□□□□□ -0.28
PHACTR3-205ENST00000395636 PFKFB3Q16875 520 aaPredicted RBP13.31□□□□□ -0.28
PHACTR3-205ENST00000395636 EARS2Q5JPH6 523 aaKnown RBP13.31□□□□□ -0.28
PHACTR3-205ENST00000395636 FAM177A1Q8N128 213 aaPredicted RBP13.31□□□□□ -0.28
PHACTR3-205ENST00000395636 AGBL3Q8NEM8 1001 aa13.31□□□□□ -0.28
PHACTR3-205ENST00000395636 GPKOWQ92917 476 aaPredicted RBP eCLIP13.31□□□□□ -0.28
PHACTR3-205ENST00000395636 KIFC2Q96AC6 838 aa13.31□□□□□ -0.28
PHACTR3-205ENST00000395636 DHX58Q96C10 678 aa13.31□□□□□ -0.28
PHACTR3-205ENST00000395636 WDR24Q96S15 920 aa13.31□□□□□ -0.28
PHACTR3-205ENST00000395636 MYOZ2Q9NPC6 264 aa13.31□□□□□ -0.28
PHACTR3-205ENST00000395636 ODF2LQ9ULJ1 636 aa13.31□□□□□ -0.28
PHACTR3-205ENST00000395636 FRMPD2Q68DX3 1309 aaPredicted RBP13.31□□□□□ -0.28
PHACTR3-205ENST00000395636 PHACTR2O75167 634 aa13.31□□□□□ -0.28
PHACTR3-205ENST00000395636 CCT5P48643 541 aa13.31□□□□□ -0.28
PHACTR3-205ENST00000395636 GRM4Q14833 912 aa13.31□□□□□ -0.28
PHACTR3-205ENST00000395636 NPY5RQ15761 445 aa13.31□□□□□ -0.28
PHACTR3-205ENST00000395636 SPDYE2Q495Y8 402 aa13.31□□□□□ -0.28
PHACTR3-205ENST00000395636 USP49Q70CQ1 688 aa13.31□□□□□ -0.28
PHACTR3-205ENST00000395636 MIGA2Q7L4E1 593 aa13.31□□□□□ -0.28
PHACTR3-205ENST00000395636 SPATA20Q8TB22 786 aa13.31□□□□□ -0.28
PHACTR3-205ENST00000395636 ITFG2Q969R8 447 aa13.31□□□□□ -0.28
PHACTR3-205ENST00000395636 UBA5Q9GZZ9 404 aa13.31□□□□□ -0.28
PHACTR3-205ENST00000395636 HDAC9Q9UKV0 1011 aa13.31□□□□□ -0.28
PHACTR3-205ENST00000395636 GREB1LQ9C091 1923 aaPredicted RBP13.31□□□□□ -0.28
PHACTR3-205ENST00000395636 CALML3P27482 149 aa13.3□□□□□ -0.28
PHACTR3-205ENST00000395636 GNAQP50148 359 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms