RNA–Protein interactions for RNA: ENST00000395522.6

SPECC1-202, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, humanhuman

TSL 1 (best) BASIC

Gene SPECC1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPECC1-202ENST00000395522 GUCY2DQ02846 1103 aa16.2■□□□□ 0.18
SPECC1-202ENST00000395522 CT47A1Q5JQC4 288 aaPredicted RBP16.2■□□□□ 0.18
SPECC1-202ENST00000395522 C8orf74Q6P047 294 aa16.2■□□□□ 0.18
SPECC1-202ENST00000395522 ZNF444Q8N0Y2 327 aaPredicted RBP16.2■□□□□ 0.18
SPECC1-202ENST00000395522 CDK5RAP3Q96JB5 506 aa16.2■□□□□ 0.18
SPECC1-202ENST00000395522 USO1O60763 962 aaKnown RBP16.19■□□□□ 0.18
SPECC1-202ENST00000395522 RCAN1P53805 252 aa16.19■□□□□ 0.18
SPECC1-202ENST00000395522 GUCY1A3Q02108 690 aa16.19■□□□□ 0.18
SPECC1-202ENST00000395522 PIGSQ96S52 555 aa16.19■□□□□ 0.18
SPECC1-202ENST00000395522 NDST4Q9H3R1 872 aa16.19■□□□□ 0.18
SPECC1-202ENST00000395522 PARP4Q9UKK3 1724 aaKnown RBP16.19■□□□□ 0.18
SPECC1-202ENST00000395522 DUOX1Q9NRD9 1551 aa16.19■□□□□ 0.18
SPECC1-202ENST00000395522 TDP2O95551 362 aa16.19■□□□□ 0.18
SPECC1-202ENST00000395522 OR52Z1P0C646 297 aa16.19■□□□□ 0.18
SPECC1-202ENST00000395522 TRAPPC10P48553 1259 aa16.19■□□□□ 0.18
SPECC1-202ENST00000395522 CORO7P57737 925 aa16.19■□□□□ 0.18
SPECC1-202ENST00000395522 TTMPQ5BVD1 217 aa16.19■□□□□ 0.18
SPECC1-202ENST00000395522 ARL6IP4Q66PJ3 421 aaKnown RBP16.19■□□□□ 0.18
SPECC1-202ENST00000395522 CCDC43Q96MW1 224 aaKnown RBP16.19■□□□□ 0.18
SPECC1-202ENST00000395522 TMEM47Q9BQJ4 181 aa16.19■□□□□ 0.18
SPECC1-202ENST00000395522 EPB41L5Q9HCM4 733 aa16.19■□□□□ 0.18
SPECC1-202ENST00000395522 FAM184BQ9ULE4 1060 aa16.19■□□□□ 0.18
SPECC1-202ENST00000395522 A0A1W2PQC6 194 aa16.18■□□□□ 0.18
SPECC1-202ENST00000395522 MYMKA6NI61 221 aa16.18■□□□□ 0.18
SPECC1-202ENST00000395522 STXBP3O00186 592 aa16.18■□□□□ 0.18
SPECC1-202ENST00000395522 GLI1P08151 1106 aa16.18■□□□□ 0.18
SPECC1-202ENST00000395522 MEA1Q16626 185 aa16.18■□□□□ 0.18
SPECC1-202ENST00000395522 FAM182BQ5T319 152 aa16.18■□□□□ 0.18
SPECC1-202ENST00000395522 PACSIN1Q9BY11 444 aa16.18■□□□□ 0.18
SPECC1-202ENST00000395522 ANKIB1Q9P2G1 1089 aa16.18■□□□□ 0.18
SPECC1-202ENST00000395522 MKRN1Q9UHC7 482 aaKnown RBP16.18■□□□□ 0.18
SPECC1-202ENST00000395522 JRKLQ9Y4A0 524 aa16.18■□□□□ 0.18
SPECC1-202ENST00000395522 FAM169AQ9Y6X4 670 aa16.18■□□□□ 0.18
SPECC1-202ENST00000395522 EHHADHQ08426 723 aa16.18■□□□□ 0.18
SPECC1-202ENST00000395522 KCNK18Q7Z418 384 aa16.18■□□□□ 0.18
SPECC1-202ENST00000395522 GPATCH11Q8N954 259 aa16.18■□□□□ 0.18
SPECC1-202ENST00000395522 EHBP1Q8NDI1 1231 aa16.18■□□□□ 0.18
SPECC1-202ENST00000395522 KAT2BQ92831 832 aa16.18■□□□□ 0.18
SPECC1-202ENST00000395522 KRT12Q99456 494 aa16.18■□□□□ 0.18
SPECC1-202ENST00000395522 FGFBP2Q9BYJ0 223 aa16.18■□□□□ 0.18
SPECC1-202ENST00000395522 SH2D4AQ9H788 454 aa16.18■□□□□ 0.18
SPECC1-202ENST00000395522 ZNF804BA4D1E1 1349 aa16.17■□□□□ 0.18
SPECC1-202ENST00000395522 SLC20A2Q08357 652 aa16.17■□□□□ 0.18
SPECC1-202ENST00000395522 PTF1AQ7RTS3 328 aa16.17■□□□□ 0.18
SPECC1-202ENST00000395522 OR2W6PQ8NHA6 318 aa16.17■□□□□ 0.18
SPECC1-202ENST00000395522 CCDC47Q96A33 483 aaKnown RBP16.17■□□□□ 0.18
SPECC1-202ENST00000395522 FLT1P17948 1338 aa16.17■□□□□ 0.18
SPECC1-202ENST00000395522 NPHP3-ACAD11A0A0J9YXS1 232 aa16.17■□□□□ 0.18
SPECC1-202ENST00000395522 NDUFAB1O14561 156 aa16.17■□□□□ 0.18
SPECC1-202ENST00000395522 MARCH6O60337 910 aa16.17■□□□□ 0.18
SPECC1-202ENST00000395522 TNNI2P48788 182 aa16.17■□□□□ 0.18
SPECC1-202ENST00000395522 AARSP49588 968 aaKnown RBP eCLIP16.17■□□□□ 0.18
SPECC1-202ENST00000395522 SEC24CP53992 1094 aa16.17■□□□□ 0.18
SPECC1-202ENST00000395522 PDE4CQ08493 712 aa16.17■□□□□ 0.18
SPECC1-202ENST00000395522 HAUS3Q68CZ6 603 aa16.17■□□□□ 0.18
SPECC1-202ENST00000395522 ZIM3Q96PE6 472 aa16.17■□□□□ 0.18
SPECC1-202ENST00000395522 BCCIPQ9P287 314 aaKnown RBP eCLIP16.17■□□□□ 0.18
SPECC1-202ENST00000395522 EBAG9O00559 213 aa16.17■□□□□ 0.18
SPECC1-202ENST00000395522 SLC37A4O43826 429 aa16.17■□□□□ 0.18
SPECC1-202ENST00000395522 ATP2C2O75185 946 aa16.17■□□□□ 0.18
SPECC1-202ENST00000395522 UBE2SQ16763 222 aa16.17■□□□□ 0.18
SPECC1-202ENST00000395522 TBC1D9BQ66K14 1250 aa16.17■□□□□ 0.18
SPECC1-202ENST00000395522 LRRC47Q8N1G4 583 aaKnown RBP16.17■□□□□ 0.18
SPECC1-202ENST00000395522 TRIM58Q8NG06 486 aa16.17■□□□□ 0.18
SPECC1-202ENST00000395522 AENQ8WTP8 325 aaKnown RBP16.17■□□□□ 0.18
SPECC1-202ENST00000395522 PCNTO95613 3336 aa16.16■□□□□ 0.18
SPECC1-202ENST00000395522 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.16■□□□□ 0.18
SPECC1-202ENST00000395522 HEXIM1O94992 359 aaKnown RBP16.16■□□□□ 0.18
SPECC1-202ENST00000395522 POLR2FP61218 127 aaKnown RBP16.16■□□□□ 0.18
SPECC1-202ENST00000395522 RAPGEF1Q13905 1077 aa16.16■□□□□ 0.18
SPECC1-202ENST00000395522 HLTFQ14527 1009 aaKnown RBP eCLIP16.16■□□□□ 0.18
SPECC1-202ENST00000395522 VWA3BQ502W6 1294 aa16.16■□□□□ 0.18
SPECC1-202ENST00000395522 MAATS1Q7Z4T9 603 aa16.16■□□□□ 0.18
SPECC1-202ENST00000395522 DDX42Q86XP3 938 aaKnown RBP eCLIP16.16■□□□□ 0.18
SPECC1-202ENST00000395522 MMTAG2Q9BU76 263 aaKnown RBP16.16■□□□□ 0.18
SPECC1-202ENST00000395522 BCL9LQ86UU0 1499 aa16.16■□□□□ 0.18
SPECC1-202ENST00000395522 STRCP1A6NGW2 1772 aa16.16■□□□□ 0.18
SPECC1-202ENST00000395522 TIAM2Q8IVF5 1701 aa16.16■□□□□ 0.18
SPECC1-202ENST00000395522 TRAF5O00463 557 aa16.16■□□□□ 0.18
SPECC1-202ENST00000395522 PAFAH1B1P43034 410 aa16.16■□□□□ 0.18
SPECC1-202ENST00000395522 UBE4AQ14139 1066 aa16.16■□□□□ 0.18
SPECC1-202ENST00000395522 CCDC40Q4G0X9 1142 aa16.16■□□□□ 0.18
SPECC1-202ENST00000395522 MTA3Q9BTC8 594 aa16.16■□□□□ 0.18
SPECC1-202ENST00000395522 GPCPD1Q9NPB8 672 aa16.16■□□□□ 0.18
SPECC1-202ENST00000395522 STIM2Q9P246 746 aa16.16■□□□□ 0.18
SPECC1-202ENST00000395522 ORC4O43929 436 aa16.15■□□□□ 0.18
SPECC1-202ENST00000395522 PALMO75781 387 aa16.15■□□□□ 0.18
SPECC1-202ENST00000395522 RPS8P62241 208 aaKnown RBP16.15■□□□□ 0.18
SPECC1-202ENST00000395522 NONOQ15233 471 aaKnown RBP eCLIP16.15■□□□□ 0.18
SPECC1-202ENST00000395522 PARP10Q53GL7 1025 aa16.15■□□□□ 0.18
SPECC1-202ENST00000395522 SOGA3Q5TF21 947 aa16.15■□□□□ 0.18
SPECC1-202ENST00000395522 TADA2BQ86TJ2 420 aa16.15■□□□□ 0.18
SPECC1-202ENST00000395522 IPO4Q8TEX9 1081 aaKnown RBP16.15■□□□□ 0.18
SPECC1-202ENST00000395522 CALML4Q96GE6 196 aa16.15■□□□□ 0.18
SPECC1-202ENST00000395522 DHTKD1Q96HY7 919 aaPredicted RBP16.15■□□□□ 0.18
SPECC1-202ENST00000395522 ALS2CR12Q96Q35 445 aa16.15■□□□□ 0.18
SPECC1-202ENST00000395522 BARHL2Q9NY43 387 aa16.15■□□□□ 0.18
SPECC1-202ENST00000395522 ADAMTS1Q9UHI8 967 aa16.15■□□□□ 0.18
SPECC1-202ENST00000395522 BICDL2A1A5D9 508 aa16.15■□□□□ 0.18
SPECC1-202ENST00000395522 HSF2BPO75031 334 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms