RNA–Protein interactions for RNA: ENST00000395453.2

SCAF11-203, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCAF11, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-203ENST00000395453 YBX2Q9Y2T7 364 aaKnown RBP15.87■□□□□ 0.13
SCAF11-203ENST00000395453 TCF20Q9UGU0 1960 aaKnown RBP15.87■□□□□ 0.13
SCAF11-203ENST00000395453 LOC102724159A0A0B4J2E5 919 aa15.86■□□□□ 0.13
SCAF11-203ENST00000395453 B4E1Z4 1266 aa15.86■□□□□ 0.13
SCAF11-203ENST00000395453 NFIBO00712 420 aa15.86■□□□□ 0.13
SCAF11-203ENST00000395453 CD4P01730 458 aa15.86■□□□□ 0.13
SCAF11-203ENST00000395453 PWP2Q15269 919 aaKnown RBP15.86■□□□□ 0.13
SCAF11-203ENST00000395453 IQSEC1Q6DN90 963 aa15.86■□□□□ 0.13
SCAF11-203ENST00000395453 MICALL1Q8N3F8 863 aa15.86■□□□□ 0.13
SCAF11-203ENST00000395453 PURBQ96QR8 312 aaKnown RBP15.86■□□□□ 0.13
SCAF11-203ENST00000395453 ZSCAN10Q96SZ4 725 aaPredicted RBP15.86■□□□□ 0.13
SCAF11-203ENST00000395453 DDX49Q9Y6V7 483 aaKnown RBP15.86■□□□□ 0.13
SCAF11-203ENST00000395453 WDR19Q8NEZ3 1342 aa15.85■□□□□ 0.13
SCAF11-203ENST00000395453 TFF2Q03403 129 aa15.85■□□□□ 0.13
SCAF11-203ENST00000395453 PPP2R2DQ66LE6 453 aa15.85■□□□□ 0.13
SCAF11-203ENST00000395453 OTOP2Q7RTS6 562 aa15.85■□□□□ 0.13
SCAF11-203ENST00000395453 ENAHQ8N8S7 591 aaPredicted RBP15.85■□□□□ 0.13
SCAF11-203ENST00000395453 PNMA1Q8ND90 353 aa15.85■□□□□ 0.13
SCAF11-203ENST00000395453 KRT23Q9C075 422 aa15.85■□□□□ 0.13
SCAF11-203ENST00000395453 HIPK3Q9H422 1215 aa15.85■□□□□ 0.13
SCAF11-203ENST00000395453 PDGFCQ9NRA1 345 aa15.85■□□□□ 0.13
SCAF11-203ENST00000395453 ADD3Q9UEY8 706 aaKnown RBP15.85■□□□□ 0.13
SCAF11-203ENST00000395453 Q9Y3F1 56 aa15.85■□□□□ 0.13
SCAF11-203ENST00000395453 LRRC37A2A6NM11 1700 aa15.85■□□□□ 0.13
SCAF11-203ENST00000395453 ATMINO43313 823 aaPredicted RBP15.84■□□□□ 0.13
SCAF11-203ENST00000395453 SMPD1P17405 629 aa15.84■□□□□ 0.13
SCAF11-203ENST00000395453 IRX6P78412 446 aaPredicted RBP15.84■□□□□ 0.13
SCAF11-203ENST00000395453 SKIV2LQ15477 1246 aaKnown RBP15.84■□□□□ 0.13
SCAF11-203ENST00000395453 RGS22Q8NE09 1264 aa15.84■□□□□ 0.13
SCAF11-203ENST00000395453 SLC39A7Q92504 469 aa15.84■□□□□ 0.13
SCAF11-203ENST00000395453 LRFN3Q9BTN0 628 aa15.84■□□□□ 0.13
SCAF11-203ENST00000395453 CNNM2Q9H8M5 875 aa15.84■□□□□ 0.13
SCAF11-203ENST00000395453 VTA1Q9NP79 307 aa15.84■□□□□ 0.13
SCAF11-203ENST00000395453 PCDHA11Q9Y5I1 949 aa15.84■□□□□ 0.13
SCAF11-203ENST00000395453 SLC4A7Q9Y6M7 1214 aa15.84■□□□□ 0.13
SCAF11-203ENST00000395453 PIEZO1Q92508 2521 aa15.84■□□□□ 0.13
SCAF11-203ENST00000395453 RAD50Q92878 1312 aa15.83■□□□□ 0.13
SCAF11-203ENST00000395453 TRANK1O15050 2925 aa15.83■□□□□ 0.12
SCAF11-203ENST00000395453 GOLGA8HP0CJ92 632 aa15.83■□□□□ 0.12
SCAF11-203ENST00000395453 C7P10643 843 aa15.83■□□□□ 0.12
SCAF11-203ENST00000395453 CHMLP26374 656 aa15.83■□□□□ 0.12
SCAF11-203ENST00000395453 ALDH5A1P51649 535 aaPredicted RBP15.83■□□□□ 0.12
SCAF11-203ENST00000395453 KCNQ1P51787 676 aa15.83■□□□□ 0.12
SCAF11-203ENST00000395453 RABGGTBP53611 331 aa15.83■□□□□ 0.12
SCAF11-203ENST00000395453 RPUSD2Q8IZ73 545 aaKnown RBP15.83■□□□□ 0.12
SCAF11-203ENST00000395453 SLC43A3Q8NBI5 491 aa15.83■□□□□ 0.12
SCAF11-203ENST00000395453 UBA5Q9GZZ9 404 aa15.83■□□□□ 0.12
SCAF11-203ENST00000395453 MAF1Q9H063 256 aa15.83■□□□□ 0.12
SCAF11-203ENST00000395453 KAT14Q9H8E8 782 aa15.83■□□□□ 0.12
SCAF11-203ENST00000395453 RBM47A0AV96 593 aaKnown RBP15.82■□□□□ 0.12
SCAF11-203ENST00000395453 PTPDC1A2A3K4 754 aa15.82■□□□□ 0.12
SCAF11-203ENST00000395453 GTPBP6O43824 516 aaPredicted RBP15.82■□□□□ 0.12
SCAF11-203ENST00000395453 CABYRO75952 493 aa15.82■□□□□ 0.12
SCAF11-203ENST00000395453 RPS6P62753 249 aaKnown RBP15.82■□□□□ 0.12
SCAF11-203ENST00000395453 BEX3Q00994 111 aa15.82■□□□□ 0.12
SCAF11-203ENST00000395453 FSCN1Q16658 493 aaKnown RBP15.82■□□□□ 0.12
SCAF11-203ENST00000395453 ASPRV1Q53RT3 343 aa15.82■□□□□ 0.12
SCAF11-203ENST00000395453 TMEM63BQ5T3F8 832 aa15.82■□□□□ 0.12
SCAF11-203ENST00000395453 RNF207Q6ZRF8 634 aa15.82■□□□□ 0.12
SCAF11-203ENST00000395453 NOL8Q76FK4 1167 aaKnown RBP15.82■□□□□ 0.12
SCAF11-203ENST00000395453 EEPD1Q7L9B9 569 aa15.82■□□□□ 0.12
SCAF11-203ENST00000395453 TLK2Q86UE8 772 aa15.82■□□□□ 0.12
SCAF11-203ENST00000395453 FBXO16Q8IX29 292 aaPredicted RBP15.82■□□□□ 0.12
SCAF11-203ENST00000395453 SEZ6LQ9BYH1 1024 aa15.82■□□□□ 0.12
SCAF11-203ENST00000395453 CPVLQ9H3G5 476 aa15.82■□□□□ 0.12
SCAF11-203ENST00000395453 EPHX3Q9H6B9 360 aa15.82■□□□□ 0.12
SCAF11-203ENST00000395453 GBF1Q92538 1859 aa15.82■□□□□ 0.12
SCAF11-203ENST00000395453 TNKSO95271 1327 aa15.82■□□□□ 0.12
SCAF11-203ENST00000395453 DYNC1LI2O43237 492 aaPredicted RBP15.81■□□□□ 0.12
SCAF11-203ENST00000395453 POU3F3P20264 500 aaPredicted RBP15.81■□□□□ 0.12
SCAF11-203ENST00000395453 PTGS1P23219 599 aa15.81■□□□□ 0.12
SCAF11-203ENST00000395453 EDNRBP24530 442 aa15.81■□□□□ 0.12
SCAF11-203ENST00000395453 CCL23P55773 120 aa15.81■□□□□ 0.12
SCAF11-203ENST00000395453 PTH1RQ03431 593 aa15.81■□□□□ 0.12
SCAF11-203ENST00000395453 SEC23AQ15436 765 aa15.81■□□□□ 0.12
SCAF11-203ENST00000395453 DUSP28Q4G0W2 176 aa15.81■□□□□ 0.12
SCAF11-203ENST00000395453 TMEM31Q5JXX7 168 aa15.81■□□□□ 0.12
SCAF11-203ENST00000395453 SLC30A10Q6XR72 485 aa15.81■□□□□ 0.12
SCAF11-203ENST00000395453 KIAA1211Q6ZU35 1233 aa15.81■□□□□ 0.12
SCAF11-203ENST00000395453 ADGRF4Q8IZF3 695 aa15.81■□□□□ 0.12
SCAF11-203ENST00000395453 DNERQ8NFT8 737 aa15.81■□□□□ 0.12
SCAF11-203ENST00000395453 RUFY2Q8WXA3 655 aa15.81■□□□□ 0.12
SCAF11-203ENST00000395453 AP5M1Q9H0R1 490 aa15.81■□□□□ 0.12
SCAF11-203ENST00000395453 METRNQ9UJH8 293 aa15.81■□□□□ 0.12
SCAF11-203ENST00000395453 COG5Q9UP83 839 aa15.81■□□□□ 0.12
SCAF11-203ENST00000395453 PRRC2BQ5JSZ5 2229 aaKnown RBP15.81■□□□□ 0.12
SCAF11-203ENST00000395453 UMODL1Q5DID0 1318 aa15.81■□□□□ 0.12
SCAF11-203ENST00000395453 MYOGP15173 224 aa15.8■□□□□ 0.12
SCAF11-203ENST00000395453 CALML3P27482 149 aa15.8■□□□□ 0.12
SCAF11-203ENST00000395453 ITGA7Q13683 1181 aa15.8■□□□□ 0.12
SCAF11-203ENST00000395453 CXCL17Q6UXB2 119 aa15.8■□□□□ 0.12
SCAF11-203ENST00000395453 CYB5R4Q7L1T6 521 aa15.8■□□□□ 0.12
SCAF11-203ENST00000395453 GRIN2DO15399 1336 aa15.8■□□□□ 0.12
SCAF11-203ENST00000395453 ZBBXA8MT70 800 aa15.79■□□□□ 0.12
SCAF11-203ENST00000395453 SGSM2O43147 1006 aa15.79■□□□□ 0.12
SCAF11-203ENST00000395453 CYP21A2P08686 494 aa15.79■□□□□ 0.12
SCAF11-203ENST00000395453 PARP1P09874 1014 aaKnown RBP15.79■□□□□ 0.12
SCAF11-203ENST00000395453 ATP2A2P16615 1042 aaKnown RBP15.79■□□□□ 0.12
SCAF11-203ENST00000395453 CDC37Q16543 378 aaPredicted RBP15.79■□□□□ 0.12
SCAF11-203ENST00000395453 USH1GQ495M9 461 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms