RNA–Protein interactions for RNA: ENST00000395305.7

HLA-DMA-203, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

BASIC

Gene HLA-DMA, Length 777 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-203ENST00000395305 COL20A1Q9P218 1284 aa16.21■□□□□ 0.19
HLA-DMA-203ENST00000395305 PRKAG2Q9UGJ0 569 aa16.21■□□□□ 0.19
HLA-DMA-203ENST00000395305 TRIOBPQ9H2D6 2365 aa16.21■□□□□ 0.19
HLA-DMA-203ENST00000395305 NKRFO15226 690 aaKnown RBP eCLIP16.2■□□□□ 0.18
HLA-DMA-203ENST00000395305 EPB41L2O43491 1005 aaKnown RBP16.2■□□□□ 0.18
HLA-DMA-203ENST00000395305 HSPA4P34932 840 aa16.2■□□□□ 0.18
HLA-DMA-203ENST00000395305 MAGEA10P43363 369 aaPredicted RBP16.2■□□□□ 0.18
HLA-DMA-203ENST00000395305 BEX3Q00994 111 aa16.2■□□□□ 0.18
HLA-DMA-203ENST00000395305 STXBP2Q15833 593 aa16.2■□□□□ 0.18
HLA-DMA-203ENST00000395305 FSCN1Q16658 493 aaKnown RBP16.2■□□□□ 0.18
HLA-DMA-203ENST00000395305 TMEM63BQ5T3F8 832 aa16.2■□□□□ 0.18
HLA-DMA-203ENST00000395305 ARHGEF16Q5VV41 709 aa16.2■□□□□ 0.18
HLA-DMA-203ENST00000395305 SRBD1Q8N5C6 995 aaKnown RBP16.2■□□□□ 0.18
HLA-DMA-203ENST00000395305 SCFD2Q8WU76 684 aa16.2■□□□□ 0.18
HLA-DMA-203ENST00000395305 VTI1AQ96AJ9 217 aa16.2■□□□□ 0.18
HLA-DMA-203ENST00000395305 RRP36Q96EU6 259 aaKnown RBP16.2■□□□□ 0.18
HLA-DMA-203ENST00000395305 TOX2Q96NM4 488 aa16.2■□□□□ 0.18
HLA-DMA-203ENST00000395305 CABYRO75952 493 aa16.19■□□□□ 0.18
HLA-DMA-203ENST00000395305 CDK7P50613 346 aa16.19■□□□□ 0.18
HLA-DMA-203ENST00000395305 ANKRD33Q7Z3H0 272 aa16.19■□□□□ 0.18
HLA-DMA-203ENST00000395305 LBHD1Q9BQE6 289 aaPredicted RBP16.19■□□□□ 0.18
HLA-DMA-203ENST00000395305 PXMP2Q9NR77 195 aa16.19■□□□□ 0.18
HLA-DMA-203ENST00000395305 DCDC2CA8MYV0 355 aa16.18■□□□□ 0.18
HLA-DMA-203ENST00000395305 GCOM1H8Y6P7 765 aaPredicted RBP16.18■□□□□ 0.18
HLA-DMA-203ENST00000395305 EIF3JO75822 258 aaKnown RBP16.18■□□□□ 0.18
HLA-DMA-203ENST00000395305 NR3C2P08235 984 aa16.18■□□□□ 0.18
HLA-DMA-203ENST00000395305 POLR2MP0CAP2 368 aa16.18■□□□□ 0.18
HLA-DMA-203ENST00000395305 PIBF1Q8WXW3 757 aa16.18■□□□□ 0.18
HLA-DMA-203ENST00000395305 SEZ6LQ9BYH1 1024 aa16.18■□□□□ 0.18
HLA-DMA-203ENST00000395305 SNX14Q9Y5W7 946 aa16.18■□□□□ 0.18
HLA-DMA-203ENST00000395305 LRRC37A2A6NM11 1700 aa16.18■□□□□ 0.18
HLA-DMA-203ENST00000395305 A0A0U1RQG5 324 aaPredicted RBP16.17■□□□□ 0.18
HLA-DMA-203ENST00000395305 ARVCFO00192 962 aa16.17■□□□□ 0.18
HLA-DMA-203ENST00000395305 PLEKHA8P1O95397 391 aa16.17■□□□□ 0.18
HLA-DMA-203ENST00000395305 TXNP10599 105 aaKnown RBP16.17■□□□□ 0.18
HLA-DMA-203ENST00000395305 EIF2AK2P19525 551 aaKnown RBP16.17■□□□□ 0.18
HLA-DMA-203ENST00000395305 RXRAP19793 462 aa16.17■□□□□ 0.18
HLA-DMA-203ENST00000395305 PTGS1P23219 599 aa16.17■□□□□ 0.18
HLA-DMA-203ENST00000395305 MDM2Q00987 491 aaPredicted RBP16.17■□□□□ 0.18
HLA-DMA-203ENST00000395305 TTLL4Q14679 1199 aa16.17■□□□□ 0.18
HLA-DMA-203ENST00000395305 PPP2R5BQ15173 497 aa16.17■□□□□ 0.18
HLA-DMA-203ENST00000395305 CCDC62Q6P9F0 684 aa16.17■□□□□ 0.18
HLA-DMA-203ENST00000395305 APOA5Q6Q788 366 aa16.17■□□□□ 0.18
HLA-DMA-203ENST00000395305 TCEANC2Q96MN5 208 aa16.17■□□□□ 0.18
HLA-DMA-203ENST00000395305 UBE2OQ9C0C9 1292 aaKnown RBP16.17■□□□□ 0.18
HLA-DMA-203ENST00000395305 PDLIM7Q9NR12 457 aa16.17■□□□□ 0.18
HLA-DMA-203ENST00000395305 SEC63Q9UGP8 760 aaKnown RBP16.17■□□□□ 0.18
HLA-DMA-203ENST00000395305 MROH7Q68CQ1 1323 aa16.17■□□□□ 0.18
HLA-DMA-203ENST00000395305 TRIM43BA6NCK2 446 aa16.16■□□□□ 0.18
HLA-DMA-203ENST00000395305 PQBP1O60828 265 aaKnown RBP16.16■□□□□ 0.18
HLA-DMA-203ENST00000395305 CLTBP09497 229 aa16.16■□□□□ 0.18
HLA-DMA-203ENST00000395305 HOXA13P31271 388 aaPredicted RBP16.16■□□□□ 0.18
HLA-DMA-203ENST00000395305 CPT1AP50416 773 aa16.16■□□□□ 0.18
HLA-DMA-203ENST00000395305 FXR1P51114 621 aaKnown RBP eCLIP16.16■□□□□ 0.18
HLA-DMA-203ENST00000395305 FAAP100Q0VG06 881 aa16.16■□□□□ 0.18
HLA-DMA-203ENST00000395305 CXCL17Q6UXB2 119 aa16.16■□□□□ 0.18
HLA-DMA-203ENST00000395305 TMTC3Q6ZXV5 915 aa16.16■□□□□ 0.18
HLA-DMA-203ENST00000395305 SH3RF1Q7Z6J0 888 aa16.16■□□□□ 0.18
HLA-DMA-203ENST00000395305 VSIG10LQ86VR7 867 aa16.16■□□□□ 0.18
HLA-DMA-203ENST00000395305 CMTR1Q8N1G2 835 aaKnown RBP16.16■□□□□ 0.18
HLA-DMA-203ENST00000395305 SLC43A3Q8NBI5 491 aa16.16■□□□□ 0.18
HLA-DMA-203ENST00000395305 OR6J1Q8NGC5 347 aa16.16■□□□□ 0.18
HLA-DMA-203ENST00000395305 TRIM43Q96BQ3 446 aaPredicted RBP16.16■□□□□ 0.18
HLA-DMA-203ENST00000395305 JAKMIP1Q96N16 626 aaKnown RBP16.16■□□□□ 0.18
HLA-DMA-203ENST00000395305 PDCD2LQ9BRP1 358 aa16.16■□□□□ 0.18
HLA-DMA-203ENST00000395305 PRDM5Q9NQX1 630 aaPredicted RBP16.16■□□□□ 0.18
HLA-DMA-203ENST00000395305 POLR3EQ9NVU0 708 aa16.16■□□□□ 0.18
HLA-DMA-203ENST00000395305 RBM28Q9NW13 759 aaKnown RBP16.16■□□□□ 0.18
HLA-DMA-203ENST00000395305 BRPF3Q9ULD4 1205 aa16.16■□□□□ 0.18
HLA-DMA-203ENST00000395305 A6NJR5 290 aa16.15■□□□□ 0.18
HLA-DMA-203ENST00000395305 KIAA0355O15063 1070 aa16.15■□□□□ 0.18
HLA-DMA-203ENST00000395305 ZBTB43O43298 467 aa16.15■□□□□ 0.18
HLA-DMA-203ENST00000395305 KPNA6O60684 536 aa16.15■□□□□ 0.18
HLA-DMA-203ENST00000395305 PSMA5P28066 241 aa16.15■□□□□ 0.18
HLA-DMA-203ENST00000395305 BRDTQ58F21 947 aaPredicted RBP16.15■□□□□ 0.18
HLA-DMA-203ENST00000395305 BLOC1S2Q6QNY1 142 aa16.15■□□□□ 0.18
HLA-DMA-203ENST00000395305 SEPT14Q6ZU15 432 aa16.15■□□□□ 0.18
HLA-DMA-203ENST00000395305 FCHSD1Q86WN1 690 aa16.15■□□□□ 0.18
HLA-DMA-203ENST00000395305 MICU3Q86XE3 530 aa16.15■□□□□ 0.18
HLA-DMA-203ENST00000395305 RAB11FIP4Q86YS3 637 aa16.15■□□□□ 0.18
HLA-DMA-203ENST00000395305 FBXL16Q8N461 479 aa16.15■□□□□ 0.18
HLA-DMA-203ENST00000395305 CCDC82Q8N4S0 544 aa16.15■□□□□ 0.18
HLA-DMA-203ENST00000395305 USP26Q9BXU7 913 aa16.15■□□□□ 0.18
HLA-DMA-203ENST00000395305 TMEM39AQ9NV64 488 aa16.15■□□□□ 0.18
HLA-DMA-203ENST00000395305 ARIH2O95376 493 aa16.14■□□□□ 0.17
HLA-DMA-203ENST00000395305 CPA1P15085 419 aa16.14■□□□□ 0.17
HLA-DMA-203ENST00000395305 RCAN1P53805 252 aa16.14■□□□□ 0.17
HLA-DMA-203ENST00000395305 FGD1P98174 961 aa16.14■□□□□ 0.17
HLA-DMA-203ENST00000395305 ITGA7Q13683 1181 aa16.14■□□□□ 0.17
HLA-DMA-203ENST00000395305 PGM5Q15124 567 aa16.14■□□□□ 0.17
HLA-DMA-203ENST00000395305 LY6KQ17RY6 165 aa16.14■□□□□ 0.17
HLA-DMA-203ENST00000395305 KCNV1Q6PIU1 500 aa16.14■□□□□ 0.17
HLA-DMA-203ENST00000395305 Q6ZUG5 572 aa16.14■□□□□ 0.17
HLA-DMA-203ENST00000395305 COPS5Q92905 334 aa16.14■□□□□ 0.17
HLA-DMA-203ENST00000395305 KIAA1217Q5T5P2 1943 aa16.13■□□□□ 0.17
HLA-DMA-203ENST00000395305 KLF18A0A0U1RQI7 1052 aa16.13■□□□□ 0.17
HLA-DMA-203ENST00000395305 PIK3CDO00329 1044 aa16.13■□□□□ 0.17
HLA-DMA-203ENST00000395305 TLR3O15455 904 aaKnown RBP16.13■□□□□ 0.17
HLA-DMA-203ENST00000395305 GH1P01241 217 aa16.13■□□□□ 0.17
HLA-DMA-203ENST00000395305 MYCLP12524 364 aaPredicted RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms