RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 SSRP1Q08945 709 aaKnown RBP22.92■■□□□ 1.26
SNCA-203ENST00000394986 ST3GAL1Q11201 340 aa22.92■■□□□ 1.26
SNCA-203ENST00000394986 ARHGEF16Q5VV41 709 aa22.92■■□□□ 1.26
SNCA-203ENST00000394986 NSUN6Q8TEA1 469 aaKnown RBP22.92■■□□□ 1.26
SNCA-203ENST00000394986 GTF3C6Q969F1 213 aa22.92■■□□□ 1.26
SNCA-203ENST00000394986 PDGFCQ9NRA1 345 aa22.92■■□□□ 1.26
SNCA-203ENST00000394986 LRRC37A2A6NM11 1700 aa22.92■■□□□ 1.26
SNCA-203ENST00000394986 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.91■■□□□ 1.26
SNCA-203ENST00000394986 hCG_1984214I3L0E3 225 aa22.91■■□□□ 1.26
SNCA-203ENST00000394986 CTDNEP1O95476 244 aa22.91■■□□□ 1.26
SNCA-203ENST00000394986 CCDC144BQ3MJ40 725 aa22.91■■□□□ 1.26
SNCA-203ENST00000394986 CPLX2Q6PUV4 134 aaKnown RBP22.91■■□□□ 1.26
SNCA-203ENST00000394986 SAMD3Q8N6K7 520 aa22.91■■□□□ 1.26
SNCA-203ENST00000394986 ZNF713Q8N859 430 aaPredicted RBP22.91■■□□□ 1.26
SNCA-203ENST00000394986 IL31RAQ8NI17 732 aa22.91■■□□□ 1.26
SNCA-203ENST00000394986 SMARCC2Q8TAQ2 1214 aa22.91■■□□□ 1.26
SNCA-203ENST00000394986 MAP3K20Q9NYL2 800 aaKnown RBP22.91■■□□□ 1.26
SNCA-203ENST00000394986 MCM3APO60318 1980 aa22.91■■□□□ 1.26
SNCA-203ENST00000394986 AKR1A1P14550 325 aa22.91■■□□□ 1.26
SNCA-203ENST00000394986 PTGS1P23219 599 aa22.91■■□□□ 1.26
SNCA-203ENST00000394986 ADCYAP1R1P41586 468 aa22.91■■□□□ 1.26
SNCA-203ENST00000394986 TMEM63BQ5T3F8 832 aa22.91■■□□□ 1.26
SNCA-203ENST00000394986 PPP1R18Q6NYC8 613 aa22.91■■□□□ 1.26
SNCA-203ENST00000394986 TRIM22Q8IYM9 498 aa22.91■■□□□ 1.26
SNCA-203ENST00000394986 CUL5Q93034 780 aa22.91■■□□□ 1.26
SNCA-203ENST00000394986 AIFM3Q96NN9 605 aa22.91■■□□□ 1.26
SNCA-203ENST00000394986 PDCD2LQ9BRP1 358 aa22.91■■□□□ 1.26
SNCA-203ENST00000394986 RBM27Q9P2N5 1060 aaKnown RBP22.91■■□□□ 1.26
SNCA-203ENST00000394986 LIMCH1Q9UPQ0 1083 aa22.91■■□□□ 1.26
SNCA-203ENST00000394986 LOC102724159A0A0B4J2E5 919 aa22.9■■□□□ 1.26
SNCA-203ENST00000394986 SMCO2A6NFE2 343 aa22.9■■□□□ 1.26
SNCA-203ENST00000394986 PIK3CDO00329 1044 aa22.9■■□□□ 1.26
SNCA-203ENST00000394986 PWP2Q15269 919 aaKnown RBP22.9■■□□□ 1.26
SNCA-203ENST00000394986 TAPT1Q6NXT6 567 aa22.9■■□□□ 1.26
SNCA-203ENST00000394986 ZFP91Q96JP5 570 aaPredicted RBP22.9■■□□□ 1.26
SNCA-203ENST00000394986 VTA1Q9NP79 307 aa22.9■■□□□ 1.26
SNCA-203ENST00000394986 VPS54Q9P1Q0 977 aa22.9■■□□□ 1.26
SNCA-203ENST00000394986 OGDHLQ9ULD0 1010 aa22.9■■□□□ 1.26
SNCA-203ENST00000394986 FAM184BQ9ULE4 1060 aa22.9■■□□□ 1.26
SNCA-203ENST00000394986 ADAMTS3O15072 1205 aa22.89■■□□□ 1.25
SNCA-203ENST00000394986 MSCO60682 206 aa22.89■■□□□ 1.25
SNCA-203ENST00000394986 CD2BP2O95400 341 aaKnown RBP22.89■■□□□ 1.25
SNCA-203ENST00000394986 NR3C2P08235 984 aa22.89■■□□□ 1.25
SNCA-203ENST00000394986 ADCY7P51828 1080 aa22.89■■□□□ 1.25
SNCA-203ENST00000394986 DIS3LQ8TF46 1054 aaKnown RBP22.89■■□□□ 1.25
SNCA-203ENST00000394986 MPHOSPH6Q99547 160 aaKnown RBP22.89■■□□□ 1.25
SNCA-203ENST00000394986 RIC8AQ9NPQ8 531 aa22.89■■□□□ 1.25
SNCA-203ENST00000394986 CDKL5O76039 1030 aa22.88■■□□□ 1.25
SNCA-203ENST00000394986 MYCNP04198 464 aaPredicted RBP22.88■■□□□ 1.25
SNCA-203ENST00000394986 RARBP10826 455 aa22.88■■□□□ 1.25
SNCA-203ENST00000394986 MYCLP12524 364 aaPredicted RBP22.88■■□□□ 1.25
SNCA-203ENST00000394986 PGM5Q15124 567 aa22.88■■□□□ 1.25
SNCA-203ENST00000394986 PGBD1Q96JS3 809 aa22.88■■□□□ 1.25
SNCA-203ENST00000394986 IWS1Q96ST2 819 aa22.88■■□□□ 1.25
SNCA-203ENST00000394986 B4DLN1 442 aa22.87■■□□□ 1.25
SNCA-203ENST00000394986 DEXIO95424 95 aa22.87■■□□□ 1.25
SNCA-203ENST00000394986 PGK1P00558 417 aa22.87■■□□□ 1.25
SNCA-203ENST00000394986 MNX1P50219 401 aaPredicted RBP22.87■■□□□ 1.25
SNCA-203ENST00000394986 MRPL12P52815 198 aaKnown RBP22.87■■□□□ 1.25
SNCA-203ENST00000394986 IRX5P78411 483 aaPredicted RBP22.87■■□□□ 1.25
SNCA-203ENST00000394986 GJC2Q5T442 439 aaPredicted RBP22.87■■□□□ 1.25
SNCA-203ENST00000394986 CCDC83Q8IWF9 413 aa22.87■■□□□ 1.25
SNCA-203ENST00000394986 NSUN7Q8NE18 718 aaKnown RBP22.87■■□□□ 1.25
SNCA-203ENST00000394986 XPNPEP3Q9NQH7 507 aa22.87■■□□□ 1.25
SNCA-203ENST00000394986 TMEM260Q9NX78 707 aa22.87■■□□□ 1.25
SNCA-203ENST00000394986 FRMPD4Q14CM0 1322 aa22.87■■□□□ 1.25
SNCA-203ENST00000394986 ST18O60284 1047 aa22.86■■□□□ 1.25
SNCA-203ENST00000394986 JAK2O60674 1132 aa22.86■■□□□ 1.25
SNCA-203ENST00000394986 FARP2O94887 1054 aaPredicted RBP22.86■■□□□ 1.25
SNCA-203ENST00000394986 SMPD1P17405 629 aa22.86■■□□□ 1.25
SNCA-203ENST00000394986 TNFAIP2Q03169 654 aa22.86■■□□□ 1.25
SNCA-203ENST00000394986 STXBP2Q15833 593 aa22.86■■□□□ 1.25
SNCA-203ENST00000394986 STK36Q9NRP7 1315 aa22.86■■□□□ 1.25
SNCA-203ENST00000394986 SEPT14Q6ZU15 432 aa22.85■■□□□ 1.25
SNCA-203ENST00000394986 ORC3Q9UBD5 711 aaPredicted RBP22.85■■□□□ 1.25
SNCA-203ENST00000394986 PCDHA6Q9UN73 950 aa22.85■■□□□ 1.25
SNCA-203ENST00000394986 PCDHA8Q9Y5H6 950 aa22.85■■□□□ 1.25
SNCA-203ENST00000394986 SYNRGQ9UMZ2 1314 aa22.85■■□□□ 1.25
SNCA-203ENST00000394986 ESYT2A0FGR8 921 aa22.84■■□□□ 1.25
SNCA-203ENST00000394986 FDPSP14324 419 aaKnown RBP22.84■■□□□ 1.25
SNCA-203ENST00000394986 CCND2P30279 289 aa22.84■■□□□ 1.25
SNCA-203ENST00000394986 RGS19P49795 217 aa22.84■■□□□ 1.25
SNCA-203ENST00000394986 UBE2Q1Q7Z7E8 422 aa22.84■■□□□ 1.25
SNCA-203ENST00000394986 VSIG10LQ86VR7 867 aa22.84■■□□□ 1.25
SNCA-203ENST00000394986 CCDC12Q8WUD4 166 aaPredicted RBP22.84■■□□□ 1.25
SNCA-203ENST00000394986 ZSCAN31Q96LW9 406 aaPredicted RBP22.84■■□□□ 1.25
SNCA-203ENST00000394986 WDR11Q9BZH6 1224 aa22.84■■□□□ 1.25
SNCA-203ENST00000394986 ZMYND12Q9H0C1 365 aa22.84■■□□□ 1.25
SNCA-203ENST00000394986 FRMPD3Q5JV73 1810 aa22.84■■□□□ 1.25
SNCA-203ENST00000394986 RBM47A0AV96 593 aaKnown RBP22.83■■□□□ 1.25
SNCA-203ENST00000394986 MYADML2A6NDP7 307 aa22.83■■□□□ 1.25
SNCA-203ENST00000394986 SPDYE3A6NKU9 549 aa22.83■■□□□ 1.25
SNCA-203ENST00000394986 ADAMTS4O75173 837 aa22.83■■□□□ 1.25
SNCA-203ENST00000394986 DUSP11O75319 330 aaKnown RBP22.83■■□□□ 1.25
SNCA-203ENST00000394986 RGS20O76081 388 aa22.83■■□□□ 1.25
SNCA-203ENST00000394986 ARIH2O95376 493 aa22.83■■□□□ 1.25
SNCA-203ENST00000394986 JAKMIP3Q5VZ66 844 aa22.83■■□□□ 1.25
SNCA-203ENST00000394986 CCDC148Q8NFR7 591 aa22.83■■□□□ 1.25
SNCA-203ENST00000394986 RASGRP4Q8TDF6 673 aa22.83■■□□□ 1.25
SNCA-203ENST00000394986 PAWRQ96IZ0 340 aaKnown RBP22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms