RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 ZNF263O14978 683 aa15.07■□□□□ 0
GTF2F1-201ENST00000394456 AKR1B1P15121 316 aa15.07■□□□□ 0
GTF2F1-201ENST00000394456 CACNB3P54284 484 aa15.07■□□□□ 0
GTF2F1-201ENST00000394456 TBC1D8BQ0IIM8 1120 aa15.07■□□□□ 0
GTF2F1-201ENST00000394456 KCNB1Q14721 858 aa15.07■□□□□ 0
GTF2F1-201ENST00000394456 LRRC41Q15345 812 aa15.07■□□□□ 0
GTF2F1-201ENST00000394456 CCDC122Q5T0U0 273 aa15.07■□□□□ 0
GTF2F1-201ENST00000394456 KCNK18Q7Z418 384 aa15.07■□□□□ 0
GTF2F1-201ENST00000394456 GSPT2Q8IYD1 628 aaKnown RBP15.07■□□□□ 0
GTF2F1-201ENST00000394456 CCDC155Q8N6L0 562 aa15.07■□□□□ 0
GTF2F1-201ENST00000394456 CEP112Q8N8E3 955 aa15.07■□□□□ 0
GTF2F1-201ENST00000394456 CCDC148Q8NFR7 591 aa15.07■□□□□ 0
GTF2F1-201ENST00000394456 P2RX5Q93086 422 aa15.07■□□□□ 0
GTF2F1-201ENST00000394456 TTYH3Q9C0H2 523 aa15.07■□□□□ 0
GTF2F1-201ENST00000394456 CAPN11Q9UMQ6 739 aa15.07■□□□□ 0
GTF2F1-201ENST00000394456 HNRNPH2P55795 449 aaKnown RBP15.07■□□□□ 0
GTF2F1-201ENST00000394456 NFIAQ12857 509 aa15.07■□□□□ 0
GTF2F1-201ENST00000394456 NONOQ15233 471 aaKnown RBP eCLIP15.07■□□□□ 0
GTF2F1-201ENST00000394456 CDC42EP5Q6NZY7 148 aa15.07■□□□□ 0
GTF2F1-201ENST00000394456 MACROD2A1Z1Q3 448 aa15.06■□□□□ 0
GTF2F1-201ENST00000394456 CTAGE15A4D2H0 777 aa15.06■□□□□ 0
GTF2F1-201ENST00000394456 H0YIN7 160 aa15.06■□□□□ 0
GTF2F1-201ENST00000394456 MAP2K7O14733 419 aa15.06■□□□□ 0
GTF2F1-201ENST00000394456 PHACTR2O75167 634 aa15.06■□□□□ 0
GTF2F1-201ENST00000394456 CTAGE8P0CG41 777 aa15.06■□□□□ 0
GTF2F1-201ENST00000394456 TRIM21P19474 475 aaKnown RBP15.06■□□□□ 0
GTF2F1-201ENST00000394456 NT5C2P49902 561 aa15.06■□□□□ 0
GTF2F1-201ENST00000394456 EN1Q05925 392 aaPredicted RBP15.06■□□□□ 0
GTF2F1-201ENST00000394456 GRB10Q13322 594 aa15.06■□□□□ 0
GTF2F1-201ENST00000394456 EZH2Q15910 746 aaKnown RBP15.06■□□□□ 0
GTF2F1-201ENST00000394456 UBE2SQ16763 222 aa15.06■□□□□ 0
GTF2F1-201ENST00000394456 CTAGE6Q86UF2 777 aa15.06■□□□□ 0
GTF2F1-201ENST00000394456 CTAGE4Q8IX94 777 aa15.06■□□□□ 0
GTF2F1-201ENST00000394456 MSANTD4Q8NCY6 345 aa15.06■□□□□ 0
GTF2F1-201ENST00000394456 THAP9Q9H5L6 903 aa15.06■□□□□ 0
GTF2F1-201ENST00000394456 GPCPD1Q9NPB8 672 aa15.06■□□□□ 0
GTF2F1-201ENST00000394456 BLOC1S4Q9NUP1 217 aa15.06■□□□□ 0
GTF2F1-201ENST00000394456 EXOC1Q9NV70 894 aa15.06■□□□□ 0
GTF2F1-201ENST00000394456 MAGEC2Q9UBF1 373 aaPredicted RBP15.06■□□□□ 0
GTF2F1-201ENST00000394456 MYMKA6NI61 221 aa15.06■□□□□ 0
GTF2F1-201ENST00000394456 MTIF2P46199 727 aaKnown RBP15.06■□□□□ 0
GTF2F1-201ENST00000394456 TEKT1Q969V4 418 aa15.06■□□□□ 0
GTF2F1-201ENST00000394456 PNMA5Q96PV4 448 aa15.06■□□□□ 0
GTF2F1-201ENST00000394456 PYM1Q9BRP8 204 aaKnown RBP15.06■□□□□ 0
GTF2F1-201ENST00000394456 RAB21Q9UL25 225 aa15.06■□□□□ 0
GTF2F1-201ENST00000394456 SUGT1Q9Y2Z0 365 aa15.06■□□□□ 0
GTF2F1-201ENST00000394456 PDE2AO00408 941 aaPredicted RBP15.05■□□□□ 0
GTF2F1-201ENST00000394456 EEF1GP26641 437 aaKnown RBP15.05■□□□□ 0
GTF2F1-201ENST00000394456 ECM1Q16610 540 aa15.05■□□□□ 0
GTF2F1-201ENST00000394456 SHROOM1Q2M3G4 852 aaPredicted RBP15.05■□□□□ 0
GTF2F1-201ENST00000394456 APOBEC3HQ6NTF7 200 aaKnown RBP15.05■□□□□ 0
GTF2F1-201ENST00000394456 NEK8Q86SG6 692 aa15.05■□□□□ 0
GTF2F1-201ENST00000394456 ZFPM1Q8IX07 1006 aa15.05■□□□□ 0
GTF2F1-201ENST00000394456 NHEJ1Q9H9Q4 299 aaPredicted RBP15.05■□□□□ 0
GTF2F1-201ENST00000394456 SMARCAL1Q9NZC9 954 aa15.05■□□□□ 0
GTF2F1-201ENST00000394456 L1RE1Q9UN81 338 aa15.05■□□□□ 0
GTF2F1-201ENST00000394456 LRRIQ3A6PVS8 624 aaPredicted RBP15.05■□□□□ -0
GTF2F1-201ENST00000394456 CCNE1P24864 410 aa15.05■□□□□ -0
GTF2F1-201ENST00000394456 GABPAQ06546 454 aa15.05■□□□□ -0
GTF2F1-201ENST00000394456 TCP10Q12799 353 aa15.05■□□□□ -0
GTF2F1-201ENST00000394456 TRIM14Q14142 442 aa15.05■□□□□ -0
GTF2F1-201ENST00000394456 BRD3Q15059 726 aa15.05■□□□□ -0
GTF2F1-201ENST00000394456 TTBK2Q6IQ55 1244 aa15.05■□□□□ -0
GTF2F1-201ENST00000394456 DRC1Q96MC2 740 aa15.05■□□□□ -0
GTF2F1-201ENST00000394456 NOC4LQ9BVI4 516 aaKnown RBP15.05■□□□□ -0
GTF2F1-201ENST00000394456 KANSL2Q9H9L4 492 aa15.05■□□□□ -0
GTF2F1-201ENST00000394456 FAM207AQ9NSI2 230 aaPredicted RBP15.05■□□□□ -0
GTF2F1-201ENST00000394456 CRKP46108 304 aa15.04■□□□□ -0
GTF2F1-201ENST00000394456 RBM5P52756 815 aaKnown RBP eCLIP15.04■□□□□ -0
GTF2F1-201ENST00000394456 APBA1Q02410 837 aa15.04■□□□□ -0
GTF2F1-201ENST00000394456 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.04■□□□□ -0
GTF2F1-201ENST00000394456 TRAPPC11Q7Z392 1133 aa15.04■□□□□ -0
GTF2F1-201ENST00000394456 RRP36Q96EU6 259 aaKnown RBP15.04■□□□□ -0
GTF2F1-201ENST00000394456 ZFP91Q96JP5 570 aaPredicted RBP15.04■□□□□ -0
GTF2F1-201ENST00000394456 SPZ1Q9BXG8 430 aa15.04■□□□□ -0
GTF2F1-201ENST00000394456 FGFBP2Q9BYJ0 223 aa15.04■□□□□ -0
GTF2F1-201ENST00000394456 SERPINB13Q9UIV8 391 aa15.04■□□□□ -0
GTF2F1-201ENST00000394456 A0A1W2PQC6 194 aa15.04■□□□□ -0
GTF2F1-201ENST00000394456 FAM196BA6NMK8 535 aa15.04■□□□□ -0
GTF2F1-201ENST00000394456 SLC16A2P36021 539 aa15.04■□□□□ -0
GTF2F1-201ENST00000394456 STIM1Q13586 685 aa15.04■□□□□ -0
GTF2F1-201ENST00000394456 KIAA1328Q86T90 577 aa15.04■□□□□ -0
GTF2F1-201ENST00000394456 JAKMIP2Q96AA8 810 aa15.04■□□□□ -0
GTF2F1-201ENST00000394456 PSMB7Q99436 277 aa15.04■□□□□ -0
GTF2F1-201ENST00000394456 PDGFDQ9GZP0 370 aaPredicted RBP15.04■□□□□ -0
GTF2F1-201ENST00000394456 MTMR4Q9NYA4 1195 aa15.04■□□□□ -0
GTF2F1-201ENST00000394456 VPS18Q9P253 973 aa15.04■□□□□ -0
GTF2F1-201ENST00000394456 ATP8B1O43520 1251 aa15.03■□□□□ -0
GTF2F1-201ENST00000394456 ECE2O60344 883 aa15.03■□□□□ -0
GTF2F1-201ENST00000394456 PPP1R11O60927 126 aaPredicted RBP15.03■□□□□ -0
GTF2F1-201ENST00000394456 DNM2P50570 870 aa15.03■□□□□ -0
GTF2F1-201ENST00000394456 KRT25Q7Z3Z0 450 aa15.03■□□□□ -0
GTF2F1-201ENST00000394456 PODNQ7Z5L7 613 aa15.03■□□□□ -0
GTF2F1-201ENST00000394456 MLXIPQ9HAP2 919 aa15.03■□□□□ -0
GTF2F1-201ENST00000394456 C6orf50Q9HD87 102 aa15.03■□□□□ -0
GTF2F1-201ENST00000394456 EHD2Q9NZN4 543 aa15.03■□□□□ -0
GTF2F1-201ENST00000394456 LRWD1Q9UFC0 647 aa15.03■□□□□ -0
GTF2F1-201ENST00000394456 MYH4Q9Y623 1939 aa15.03■□□□□ -0
GTF2F1-201ENST00000394456 MPHOSPH10O00566 681 aaKnown RBP15.03■□□□□ -0
GTF2F1-201ENST00000394456 MYBL2P10244 700 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms