RNA–Protein interactions for RNA: ENST00000394089.6

RARA-204, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RARA, Length 2,024 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-204ENST00000394089 PPP1R13BQ96KQ4 1090 aa26.04■■□□□ 1.76
RARA-204ENST00000394089 SRRTQ9BXP5 876 aaKnown RBP26.04■■□□□ 1.76
RARA-204ENST00000394089 PCDHA5Q9Y5H7 936 aa26.04■■□□□ 1.76
RARA-204ENST00000394089 TXLNAP40222 546 aa26.03■■□□□ 1.76
RARA-204ENST00000394089 SNAP25P60880 206 aa26.03■■□□□ 1.76
RARA-204ENST00000394089 TEX2Q8IWB9 1127 aa26.03■■□□□ 1.76
RARA-204ENST00000394089 IQUBQ8NA54 791 aa26.03■■□□□ 1.76
RARA-204ENST00000394089 ZNF341Q9BYN7 854 aa26.03■■□□□ 1.76
RARA-204ENST00000394089 TRMT1Q9NXH9 659 aaKnown RBP26.03■■□□□ 1.76
RARA-204ENST00000394089 PPP2R3BQ9Y5P8 575 aa26.03■■□□□ 1.76
RARA-204ENST00000394089 PHLPP2Q6ZVD8 1323 aa26.03■■□□□ 1.76
RARA-204ENST00000394089 BIN1O00499 593 aa26.02■■□□□ 1.76
RARA-204ENST00000394089 E2F4Q16254 413 aa26.02■■□□□ 1.76
RARA-204ENST00000394089 AK8Q96MA6 479 aa26.02■■□□□ 1.76
RARA-204ENST00000394089 ZNF112Q9UJU3 913 aa26.02■■□□□ 1.76
RARA-204ENST00000394089 FEM1BQ9UK73 627 aa26.02■■□□□ 1.76
RARA-204ENST00000394089 TPM1P09493 284 aa26.02■■□□□ 1.76
RARA-204ENST00000394089 SARSP49591 514 aaKnown RBP26.02■■□□□ 1.76
RARA-204ENST00000394089 AP3B2Q13367 1082 aa26.02■■□□□ 1.76
RARA-204ENST00000394089 PPP4R3AQ6IN85 833 aa26.02■■□□□ 1.76
RARA-204ENST00000394089 NAP1L4Q99733 375 aaKnown RBP26.02■■□□□ 1.76
RARA-204ENST00000394089 RANBP17Q9H2T7 1088 aaKnown RBP26.02■■□□□ 1.76
RARA-204ENST00000394089 EPS15P42566 896 aa26.01■■□□□ 1.75
RARA-204ENST00000394089 CCDC84Q86UT8 332 aaPredicted RBP26.01■■□□□ 1.75
RARA-204ENST00000394089 PAGE5Q96GU1 130 aa26.01■■□□□ 1.75
RARA-204ENST00000394089 MTMR9Q96QG7 549 aa26.01■■□□□ 1.75
RARA-204ENST00000394089 CCSER1Q9C0I3 900 aa26.01■■□□□ 1.75
RARA-204ENST00000394089 PRR29P0C7W0 189 aa26■■□□□ 1.75
RARA-204ENST00000394089 ZYXQ15942 572 aaKnown RBP26■■□□□ 1.75
RARA-204ENST00000394089 SPATA20Q8TB22 786 aa26■■□□□ 1.75
RARA-204ENST00000394089 KIAA1683Q9H0B3 1180 aa26■■□□□ 1.75
RARA-204ENST00000394089 BECN2A8MW95 431 aa26■■□□□ 1.75
RARA-204ENST00000394089 USP17L15C9J2P7 530 aa26■■□□□ 1.75
RARA-204ENST00000394089 USP17L13C9JLJ4 530 aa26■■□□□ 1.75
RARA-204ENST00000394089 USP17L11C9JVI0 530 aa26■■□□□ 1.75
RARA-204ENST00000394089 USP17L18D6R9N7 530 aa26■■□□□ 1.75
RARA-204ENST00000394089 USP17L22D6RA61 530 aa26■■□□□ 1.75
RARA-204ENST00000394089 USP17L17D6RBQ6 530 aa26■■□□□ 1.75
RARA-204ENST00000394089 USP17L19D6RCP7 530 aa26■■□□□ 1.75
RARA-204ENST00000394089 USP17L20D6RJB6 530 aa26■■□□□ 1.75
RARA-204ENST00000394089 MEIS2O14770 477 aa26■■□□□ 1.75
RARA-204ENST00000394089 HIRAP54198 1017 aaPredicted RBP26■■□□□ 1.75
RARA-204ENST00000394089 USP17L24Q0WX57 530 aa26■■□□□ 1.75
RARA-204ENST00000394089 USP17L6PQ6QN14 398 aa26■■□□□ 1.75
RARA-204ENST00000394089 TMCO3Q6UWJ1 677 aa26■■□□□ 1.75
RARA-204ENST00000394089 LPAR1Q92633 364 aa26■■□□□ 1.75
RARA-204ENST00000394089 SMARCE1Q969G3 411 aa26■■□□□ 1.75
RARA-204ENST00000394089 CCP110O43303 1012 aa25.99■■□□□ 1.75
RARA-204ENST00000394089 GCFC2P16383 781 aaKnown RBP25.99■■□□□ 1.75
RARA-204ENST00000394089 ARHGAP29Q52LW3 1261 aa25.99■■□□□ 1.75
RARA-204ENST00000394089 POTEDQ86YR6 584 aa25.99■■□□□ 1.75
RARA-204ENST00000394089 TRIML1Q8N9V2 468 aa25.99■■□□□ 1.75
RARA-204ENST00000394089 GGA3Q9NZ52 723 aa25.99■■□□□ 1.75
RARA-204ENST00000394089 SMC2O95347 1197 aa25.98■■□□□ 1.75
RARA-204ENST00000394089 TDP2O95551 362 aa25.98■■□□□ 1.75
RARA-204ENST00000394089 USH1GQ495M9 461 aa25.98■■□□□ 1.75
RARA-204ENST00000394089 PDXDC2PQ6P474 469 aa25.98■■□□□ 1.75
RARA-204ENST00000394089 GRAMD1CQ8IYS0 662 aa25.98■■□□□ 1.75
RARA-204ENST00000394089 RNF181Q9P0P0 153 aa25.98■■□□□ 1.75
RARA-204ENST00000394089 MAN1B1Q9UKM7 699 aa25.98■■□□□ 1.75
RARA-204ENST00000394089 CALCRLQ16602 461 aa25.98■■□□□ 1.75
RARA-204ENST00000394089 ANO3Q9BYT9 981 aa25.98■■□□□ 1.75
RARA-204ENST00000394089 PSD3Q9NYI0 1048 aa25.98■■□□□ 1.75
RARA-204ENST00000394089 PITPNM2Q9BZ72 1349 aa25.97■■□□□ 1.75
RARA-204ENST00000394089 WDR46O15213 610 aaKnown RBP25.97■■□□□ 1.75
RARA-204ENST00000394089 FOSP01100 380 aaPredicted RBP25.97■■□□□ 1.75
RARA-204ENST00000394089 YBX3P16989 372 aaKnown RBP eCLIP25.97■■□□□ 1.75
RARA-204ENST00000394089 INPP5BP32019 993 aa25.97■■□□□ 1.75
RARA-204ENST00000394089 UBA7P41226 1012 aa25.97■■□□□ 1.75
RARA-204ENST00000394089 USP11P51784 963 aa25.97■■□□□ 1.75
RARA-204ENST00000394089 KIFC2Q96AC6 838 aa25.97■■□□□ 1.75
RARA-204ENST00000394089 DISC1Q9NRI5 854 aa25.97■■□□□ 1.75
RARA-204ENST00000394089 SLC37A4O43826 429 aa25.97■■□□□ 1.75
RARA-204ENST00000394089 DDNO94850 711 aaPredicted RBP25.97■■□□□ 1.75
RARA-204ENST00000394089 SCYL3Q8IZE3 742 aa25.97■■□□□ 1.75
RARA-204ENST00000394089 AOPEPQ8N6M6 819 aa25.97■■□□□ 1.75
RARA-204ENST00000394089 PIK3CDO00329 1044 aa25.96■■□□□ 1.75
RARA-204ENST00000394089 OPLAHO14841 1288 aa25.96■■□□□ 1.75
RARA-204ENST00000394089 TADA3O75528 432 aa25.96■■□□□ 1.75
RARA-204ENST00000394089 FXR2P51116 673 aaKnown RBP eCLIP25.96■■□□□ 1.75
RARA-204ENST00000394089 MORC3Q14149 939 aa25.96■■□□□ 1.75
RARA-204ENST00000394089 ISM2Q6H9L7 571 aa25.96■■□□□ 1.75
RARA-204ENST00000394089 IGSF22Q8N9C0 903 aa25.96■■□□□ 1.75
RARA-204ENST00000394089 DOCK1Q14185 1865 aa25.96■■□□□ 1.75
RARA-204ENST00000394089 CDC25AP30304 524 aa25.95■■□□□ 1.75
RARA-204ENST00000394089 ETF1P62495 437 aaKnown RBP25.95■■□□□ 1.75
RARA-204ENST00000394089 GPS2Q13227 327 aa25.95■■□□□ 1.75
RARA-204ENST00000394089 KARSQ15046 597 aaKnown RBP25.95■■□□□ 1.75
RARA-204ENST00000394089 MOXD1Q6UVY6 613 aa25.95■■□□□ 1.75
RARA-204ENST00000394089 SYT10Q6XYQ8 523 aa25.95■■□□□ 1.75
RARA-204ENST00000394089 LRRN4CLQ8ND94 238 aa25.95■■□□□ 1.75
RARA-204ENST00000394089 WDR18Q9BV38 432 aa25.95■■□□□ 1.75
RARA-204ENST00000394089 ADARB2Q9NS39 739 aaKnown RBP25.95■■□□□ 1.75
RARA-204ENST00000394089 DDX25Q9UHL0 483 aaKnown RBP25.95■■□□□ 1.75
RARA-204ENST00000394089 CYP3A7-CYP3A51PA0A087WV96 503 aa25.95■■□□□ 1.74
RARA-204ENST00000394089 PP2D1A8MPX8 630 aa25.95■■□□□ 1.74
RARA-204ENST00000394089 EFCAB8A8MWE9 144 aa25.95■■□□□ 1.74
RARA-204ENST00000394089 CYP3A7P24462 503 aa25.95■■□□□ 1.74
RARA-204ENST00000394089 LMOD1P29536 600 aaPredicted RBP25.95■■□□□ 1.74
RARA-204ENST00000394089 AFMP43652 599 aa25.95■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms