RNA–Protein interactions for RNA: ENST00000393560.5

LAMB1-203, Transcript of laminin subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene LAMB1, Length 2,806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-203ENST00000393560 GIMAP1Q8WWP7 306 aa12.52□□□□□ -0.4
LAMB1-203ENST00000393560 RNPC3Q96LT9 517 aaKnown RBP12.52□□□□□ -0.4
LAMB1-203ENST00000393560 EIF2AQ9BY44 585 aaKnown RBP12.52□□□□□ -0.4
LAMB1-203ENST00000393560 GOLPH3LQ9H4A5 285 aa12.52□□□□□ -0.4
LAMB1-203ENST00000393560 TSC22D4Q9Y3Q8 395 aa12.52□□□□□ -0.4
LAMB1-203ENST00000393560 CHD2O14647 1828 aaKnown RBP12.52□□□□□ -0.41
LAMB1-203ENST00000393560 IKBKBO14920 756 aa12.52□□□□□ -0.41
LAMB1-203ENST00000393560 MGEA5O60502 916 aa12.52□□□□□ -0.41
LAMB1-203ENST00000393560 MYCP01106 439 aaPredicted RBP12.52□□□□□ -0.41
LAMB1-203ENST00000393560 SPATA31D3P0C874 917 aa12.52□□□□□ -0.41
LAMB1-203ENST00000393560 SH3BGRP55822 239 aaPredicted RBP12.52□□□□□ -0.41
LAMB1-203ENST00000393560 GEMIN4P57678 1058 aaKnown RBP12.52□□□□□ -0.41
LAMB1-203ENST00000393560 KRT85P78386 507 aa12.52□□□□□ -0.41
LAMB1-203ENST00000393560 ADALQ6DHV7 355 aa12.52□□□□□ -0.41
LAMB1-203ENST00000393560 SPATA31D4Q6ZUB0 917 aa12.52□□□□□ -0.41
LAMB1-203ENST00000393560 APPBP2Q92624 585 aa12.52□□□□□ -0.41
LAMB1-203ENST00000393560 HIC2Q96JB3 615 aa12.52□□□□□ -0.41
LAMB1-203ENST00000393560 RPGRIP1Q96KN7 1286 aa12.52□□□□□ -0.41
LAMB1-203ENST00000393560 COMMD8Q9NX08 183 aa12.52□□□□□ -0.41
LAMB1-203ENST00000393560 ANKARQ7Z5J8 1434 aa12.52□□□□□ -0.41
LAMB1-203ENST00000393560 RTL1A6NKG5 1358 aa12.52□□□□□ -0.41
LAMB1-203ENST00000393560 TEX28O15482 410 aa12.52□□□□□ -0.41
LAMB1-203ENST00000393560 PPP1R37O75864 691 aa12.52□□□□□ -0.41
LAMB1-203ENST00000393560 SLC16A2P36021 539 aa12.52□□□□□ -0.41
LAMB1-203ENST00000393560 LRRC49Q8IUZ0 686 aa12.52□□□□□ -0.41
LAMB1-203ENST00000393560 CDC5LQ99459 802 aaKnown RBP12.52□□□□□ -0.41
LAMB1-203ENST00000393560 SELENOOQ9BVL4 669 aa12.52□□□□□ -0.41
LAMB1-203ENST00000393560 NDST4Q9H3R1 872 aa12.52□□□□□ -0.41
LAMB1-203ENST00000393560 TTLL3Q9Y4R7 772 aa12.52□□□□□ -0.41
LAMB1-203ENST00000393560 FLT4P35916 1363 aa12.51□□□□□ -0.41
LAMB1-203ENST00000393560 NALCNQ8IZF0 1738 aa12.51□□□□□ -0.41
LAMB1-203ENST00000393560 ABCC4O15439 1325 aa12.51□□□□□ -0.41
LAMB1-203ENST00000393560 A0A0J9YVX5 310 aa12.51□□□□□ -0.41
LAMB1-203ENST00000393560 LDHCP07864 332 aa12.51□□□□□ -0.41
LAMB1-203ENST00000393560 CCND1P24385 295 aa12.51□□□□□ -0.41
LAMB1-203ENST00000393560 PPARDQ03181 441 aa12.51□□□□□ -0.41
LAMB1-203ENST00000393560 RABL6Q3YEC7 729 aaPredicted RBP12.51□□□□□ -0.41
LAMB1-203ENST00000393560 CEP85Q6P2H3 762 aa12.51□□□□□ -0.41
LAMB1-203ENST00000393560 ZNF662Q6ZS27 426 aa12.51□□□□□ -0.41
LAMB1-203ENST00000393560 PRCCQ92733 491 aaPredicted RBP12.51□□□□□ -0.41
LAMB1-203ENST00000393560 PPANQ9NQ55 473 aaKnown RBP12.51□□□□□ -0.41
LAMB1-203ENST00000393560 ETNK2Q9NVF9 386 aa12.51□□□□□ -0.41
LAMB1-203ENST00000393560 RMND1Q9NWS8 449 aa12.51□□□□□ -0.41
LAMB1-203ENST00000393560 RAB11FIP3O75154 756 aa12.51□□□□□ -0.41
LAMB1-203ENST00000393560 ATP2A2P16615 1042 aaKnown RBP12.51□□□□□ -0.41
LAMB1-203ENST00000393560 HOXC9P31274 260 aa12.51□□□□□ -0.41
LAMB1-203ENST00000393560 NLRP5P59047 1200 aa12.51□□□□□ -0.41
LAMB1-203ENST00000393560 SAFBQ15424 915 aaKnown RBP eCLIP12.51□□□□□ -0.41
LAMB1-203ENST00000393560 MTHFSDQ2M296 383 aaKnown RBP12.51□□□□□ -0.41
LAMB1-203ENST00000393560 TOGARAM2Q6ZUX3 1019 aa12.51□□□□□ -0.41
LAMB1-203ENST00000393560 MIGA2Q7L4E1 593 aa12.51□□□□□ -0.41
LAMB1-203ENST00000393560 FERMT3Q86UX7 667 aa12.51□□□□□ -0.41
LAMB1-203ENST00000393560 SYT2Q8N9I0 419 aaPredicted RBP12.51□□□□□ -0.41
LAMB1-203ENST00000393560 CCDC148Q8NFR7 591 aa12.51□□□□□ -0.41
LAMB1-203ENST00000393560 DDX17Q92841 729 aaKnown RBP12.51□□□□□ -0.41
LAMB1-203ENST00000393560 NRDE2Q9H7Z3 1164 aa12.51□□□□□ -0.41
LAMB1-203ENST00000393560 ZNF304Q9HCX3 659 aa12.51□□□□□ -0.41
LAMB1-203ENST00000393560 MTMR6Q9Y217 621 aa12.51□□□□□ -0.41
LAMB1-203ENST00000393560 SBNO1A3KN83 1393 aa12.5□□□□□ -0.41
LAMB1-203ENST00000393560 CRY1Q16526 586 aa12.5□□□□□ -0.41
LAMB1-203ENST00000393560 LACTB2Q53H82 288 aaPredicted RBP12.5□□□□□ -0.41
LAMB1-203ENST00000393560 TTMPQ5BVD1 217 aa12.5□□□□□ -0.41
LAMB1-203ENST00000393560 FAM209AQ5JX71 171 aa12.5□□□□□ -0.41
LAMB1-203ENST00000393560 GJC2Q5T442 439 aaPredicted RBP12.5□□□□□ -0.41
LAMB1-203ENST00000393560 OR52E8Q6IFG1 317 aa12.5□□□□□ -0.41
LAMB1-203ENST00000393560 TMEM214Q6NUQ4 689 aaKnown RBP12.5□□□□□ -0.41
LAMB1-203ENST00000393560 TTC39CQ8N584 583 aa12.5□□□□□ -0.41
LAMB1-203ENST00000393560 DESI2Q9BSY9 194 aa12.5□□□□□ -0.41
LAMB1-203ENST00000393560 VCXQ9H320 206 aa12.5□□□□□ -0.41
LAMB1-203ENST00000393560 CFAP45Q9UL16 551 aa12.5□□□□□ -0.41
LAMB1-203ENST00000393560 PIK3C2AO00443 1686 aa12.5□□□□□ -0.41
LAMB1-203ENST00000393560 ZNF142P52746 1687 aaPredicted RBP12.5□□□□□ -0.41
LAMB1-203ENST00000393560 RGS12O14924 1447 aa12.5□□□□□ -0.41
LAMB1-203ENST00000393560 ACTN4O43707 911 aaKnown RBP12.5□□□□□ -0.41
LAMB1-203ENST00000393560 SERPINB4P48594 390 aa12.5□□□□□ -0.41
LAMB1-203ENST00000393560 APBA1Q02410 837 aa12.5□□□□□ -0.41
LAMB1-203ENST00000393560 PPIDQ08752 370 aaKnown RBP12.5□□□□□ -0.41
LAMB1-203ENST00000393560 RASIP1Q5U651 963 aa12.5□□□□□ -0.41
LAMB1-203ENST00000393560 ZCCHC8Q6NZY4 707 aaKnown RBP12.5□□□□□ -0.41
LAMB1-203ENST00000393560 ENOX1Q8TC92 643 aaKnown RBP12.5□□□□□ -0.41
LAMB1-203ENST00000393560 PPP1R12CQ9BZL4 782 aa12.5□□□□□ -0.41
LAMB1-203ENST00000393560 DCTPP1Q9H773 170 aa12.5□□□□□ -0.41
LAMB1-203ENST00000393560 RASAL2Q9UJF2 1139 aa12.5□□□□□ -0.41
LAMB1-203ENST00000393560 FMN2Q9NZ56 1722 aa12.5□□□□□ -0.41
LAMB1-203ENST00000393560 TMEM110-MUSTN1A8MSY1 372 aa12.49□□□□□ -0.41
LAMB1-203ENST00000393560 ARHGAP6O43182 974 aa12.49□□□□□ -0.41
LAMB1-203ENST00000393560 FOXD2O60548 495 aaPredicted RBP12.49□□□□□ -0.41
LAMB1-203ENST00000393560 COL19A1Q14993 1142 aa12.49□□□□□ -0.41
LAMB1-203ENST00000393560 PTPN21Q16825 1174 aa12.49□□□□□ -0.41
LAMB1-203ENST00000393560 MAP7D3Q8IWC1 876 aa12.49□□□□□ -0.41
LAMB1-203ENST00000393560 ESX1Q8N693 406 aa12.49□□□□□ -0.41
LAMB1-203ENST00000393560 KRI1Q8N9T8 703 aaKnown RBP12.49□□□□□ -0.41
LAMB1-203ENST00000393560 LZTFL1Q9NQ48 299 aa12.49□□□□□ -0.41
LAMB1-203ENST00000393560 ADGRL3Q9HAR2 1447 aa12.49□□□□□ -0.41
LAMB1-203ENST00000393560 CETN3O15182 167 aa12.49□□□□□ -0.41
LAMB1-203ENST00000393560 MAGEB3O15480 346 aa12.49□□□□□ -0.41
LAMB1-203ENST00000393560 SULT2A1Q06520 285 aa12.49□□□□□ -0.41
LAMB1-203ENST00000393560 CCDC127Q96BQ5 260 aa12.49□□□□□ -0.41
LAMB1-203ENST00000393560 IFT43Q96FT9 208 aa12.49□□□□□ -0.41
LAMB1-203ENST00000393560 HSFX1Q9UBD0 423 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms