RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 MTMR9Q96QG7 549 aa20.98■□□□□ 0.95
CBX1-202ENST00000393408 ZC3H4Q9UPT8 1303 aaKnown RBP20.98■□□□□ 0.95
CBX1-202ENST00000393408 MYMKA6NI61 221 aa20.97■□□□□ 0.95
CBX1-202ENST00000393408 RPS6KA5O75582 802 aa20.97■□□□□ 0.95
CBX1-202ENST00000393408 GRAPQ13588 217 aa20.97■□□□□ 0.95
CBX1-202ENST00000393408 NFIXQ14938 502 aa20.97■□□□□ 0.95
CBX1-202ENST00000393408 SPA17Q15506 151 aa20.97■□□□□ 0.95
CBX1-202ENST00000393408 LEKR1Q6ZMV7 388 aa20.97■□□□□ 0.95
CBX1-202ENST00000393408 UNC13DQ70J99 1090 aa20.97■□□□□ 0.95
CBX1-202ENST00000393408 FNBP4Q8N3X1 1017 aaPredicted RBP20.97■□□□□ 0.95
CBX1-202ENST00000393408 GRAPLQ8TC17 118 aaPredicted RBP20.97■□□□□ 0.95
CBX1-202ENST00000393408 PNMA5Q96PV4 448 aa20.97■□□□□ 0.95
CBX1-202ENST00000393408 VAT1LQ9HCJ6 419 aa20.97■□□□□ 0.95
CBX1-202ENST00000393408 TMEM260Q9NX78 707 aa20.97■□□□□ 0.95
CBX1-202ENST00000393408 ARHGAP20Q9P2F6 1191 aa20.97■□□□□ 0.95
CBX1-202ENST00000393408 STK17AQ9UEE5 414 aa20.97■□□□□ 0.95
CBX1-202ENST00000393408 SYF2O95926 243 aaKnown RBP20.97■□□□□ 0.95
CBX1-202ENST00000393408 TXKP42681 527 aa20.97■□□□□ 0.95
CBX1-202ENST00000393408 TNNT3P45378 269 aaPredicted RBP20.97■□□□□ 0.95
CBX1-202ENST00000393408 CERS3Q8IU89 383 aa20.97■□□□□ 0.95
CBX1-202ENST00000393408 COG1Q8WTW3 980 aa20.97■□□□□ 0.95
CBX1-202ENST00000393408 NDST4Q9H3R1 872 aa20.97■□□□□ 0.95
CBX1-202ENST00000393408 JADE2Q9NQC1 790 aa20.97■□□□□ 0.95
CBX1-202ENST00000393408 PVALEFA0A1B0GWK0 134 aa20.96■□□□□ 0.95
CBX1-202ENST00000393408 EPHB6O15197 1021 aa20.96■□□□□ 0.95
CBX1-202ENST00000393408 CEP95Q96GE4 821 aa20.96■□□□□ 0.95
CBX1-202ENST00000393408 GPR101Q96P66 508 aaPredicted RBP20.96■□□□□ 0.95
CBX1-202ENST00000393408 LCA5LO95447 670 aa20.96■□□□□ 0.95
CBX1-202ENST00000393408 NOVP48745 357 aa20.96■□□□□ 0.95
CBX1-202ENST00000393408 FXR2P51116 673 aaKnown RBP eCLIP20.96■□□□□ 0.95
CBX1-202ENST00000393408 CCDC96Q2M329 555 aa20.96■□□□□ 0.95
CBX1-202ENST00000393408 C15orf52Q6ZUT6 534 aaKnown RBP20.96■□□□□ 0.95
CBX1-202ENST00000393408 TRIM58Q8NG06 486 aa20.96■□□□□ 0.95
CBX1-202ENST00000393408 SH2D4AQ9H788 454 aa20.96■□□□□ 0.95
CBX1-202ENST00000393408 SNX12Q9UMY4 172 aa20.96■□□□□ 0.95
CBX1-202ENST00000393408 JRKLQ9Y4A0 524 aa20.96■□□□□ 0.95
CBX1-202ENST00000393408 PCDHA13Q9Y5I0 950 aa20.96■□□□□ 0.95
CBX1-202ENST00000393408 ABCB11O95342 1321 aa20.96■□□□□ 0.95
CBX1-202ENST00000393408 GPR75-ASB3A0A0A6YYF3 556 aa20.95■□□□□ 0.94
CBX1-202ENST00000393408 USO1O60763 962 aaKnown RBP20.95■□□□□ 0.94
CBX1-202ENST00000393408 RNF40O75150 1001 aa20.95■□□□□ 0.94
CBX1-202ENST00000393408 ZMYND10O75800 440 aa20.95■□□□□ 0.94
CBX1-202ENST00000393408 CALCRLQ16602 461 aa20.95■□□□□ 0.94
CBX1-202ENST00000393408 MAN2A1Q16706 1144 aa20.95■□□□□ 0.94
CBX1-202ENST00000393408 IQCEQ6IPM2 695 aa20.95■□□□□ 0.94
CBX1-202ENST00000393408 CCNI2Q6ZMN8 369 aaPredicted RBP20.95■□□□□ 0.94
CBX1-202ENST00000393408 AMIGO3Q86WK7 504 aa20.95■□□□□ 0.94
CBX1-202ENST00000393408 C2CD5Q86YS7 1000 aa20.95■□□□□ 0.94
CBX1-202ENST00000393408 TEX11Q8IYF3 940 aa20.95■□□□□ 0.94
CBX1-202ENST00000393408 SMCR8Q8TEV9 937 aaPredicted RBP20.95■□□□□ 0.94
CBX1-202ENST00000393408 LARP4BQ92615 738 aaKnown RBP20.95■□□□□ 0.94
CBX1-202ENST00000393408 IFIH1Q9BYX4 1025 aaKnown RBP20.95■□□□□ 0.94
CBX1-202ENST00000393408 RIOX1Q9H6W3 641 aa20.95■□□□□ 0.94
CBX1-202ENST00000393408 FAM204AQ9H8W3 233 aa20.95■□□□□ 0.94
CBX1-202ENST00000393408 PRPF6O94906 941 aaKnown RBP20.95■□□□□ 0.94
CBX1-202ENST00000393408 C2orf54Q08AI8 447 aa20.95■□□□□ 0.94
CBX1-202ENST00000393408 CREG2Q8IUH2 290 aa20.95■□□□□ 0.94
CBX1-202ENST00000393408 GUF1Q8N442 669 aaKnown RBP20.95■□□□□ 0.94
CBX1-202ENST00000393408 FAM207AQ9NSI2 230 aaPredicted RBP20.95■□□□□ 0.94
CBX1-202ENST00000393408 CAPN6Q9Y6Q1 641 aa20.95■□□□□ 0.94
CBX1-202ENST00000393408 USP17L5A8MUK1 530 aa20.94■□□□□ 0.94
CBX1-202ENST00000393408 TACC1O75410 805 aa20.94■□□□□ 0.94
CBX1-202ENST00000393408 MYBL2P10244 700 aa20.94■□□□□ 0.94
CBX1-202ENST00000393408 KIF11P52732 1056 aa20.94■□□□□ 0.94
CBX1-202ENST00000393408 ZNF572Q7Z3I7 529 aaPredicted RBP20.94■□□□□ 0.94
CBX1-202ENST00000393408 ARHGEF1Q92888 912 aaKnown RBP20.94■□□□□ 0.94
CBX1-202ENST00000393408 UBA5Q9GZZ9 404 aa20.94■□□□□ 0.94
CBX1-202ENST00000393408 EDIL3O43854 480 aa20.94■□□□□ 0.94
CBX1-202ENST00000393408 IVLP07476 585 aa20.94■□□□□ 0.94
CBX1-202ENST00000393408 EIF4A3P38919 411 aaKnown RBP20.94■□□□□ 0.94
CBX1-202ENST00000393408 FAM98CQ17RN3 349 aaKnown RBP20.94■□□□□ 0.94
CBX1-202ENST00000393408 MMGT1Q8N4V1 131 aa20.94■□□□□ 0.94
CBX1-202ENST00000393408 RTCBQ9Y3I0 505 aaKnown RBP20.94■□□□□ 0.94
CBX1-202ENST00000393408 NHSQ6T4R5 1651 aa20.93■□□□□ 0.94
CBX1-202ENST00000393408 hCG_1984214I3L0E3 225 aa20.93■□□□□ 0.94
CBX1-202ENST00000393408 SLC37A4O43826 429 aa20.93■□□□□ 0.94
CBX1-202ENST00000393408 FGFR1OPO95684 399 aaKnown RBP20.93■□□□□ 0.94
CBX1-202ENST00000393408 DYMQ7RTS9 669 aa20.93■□□□□ 0.94
CBX1-202ENST00000393408 CCDC84Q86UT8 332 aaPredicted RBP20.93■□□□□ 0.94
CBX1-202ENST00000393408 ZNF713Q8N859 430 aaPredicted RBP20.93■□□□□ 0.94
CBX1-202ENST00000393408 MLXIPQ9HAP2 919 aa20.93■□□□□ 0.94
CBX1-202ENST00000393408 BTAF1O14981 1849 aa20.93■□□□□ 0.94
CBX1-202ENST00000393408 PRLRP16471 622 aa20.93■□□□□ 0.94
CBX1-202ENST00000393408 LRRC63Q05C16 580 aa20.93■□□□□ 0.94
CBX1-202ENST00000393408 ITIH3Q06033 890 aa20.93■□□□□ 0.94
CBX1-202ENST00000393408 TMEM266Q2M3C6 531 aa20.93■□□□□ 0.94
CBX1-202ENST00000393408 GSPT2Q8IYD1 628 aaKnown RBP20.93■□□□□ 0.94
CBX1-202ENST00000393408 RAD54LQ92698 747 aa20.93■□□□□ 0.94
CBX1-202ENST00000393408 SELENOOQ9BVL4 669 aa20.93■□□□□ 0.94
CBX1-202ENST00000393408 TSPYL1Q9H0U9 437 aa20.93■□□□□ 0.94
CBX1-202ENST00000393408 MYH10P35580 1976 aa20.93■□□□□ 0.94
CBX1-202ENST00000393408 TDP2O95551 362 aa20.92■□□□□ 0.94
CBX1-202ENST00000393408 RHBDL3P58872 404 aa20.92■□□□□ 0.94
CBX1-202ENST00000393408 LRRC55Q6ZSA7 311 aa20.92■□□□□ 0.94
CBX1-202ENST00000393408 CDK5RAP3Q96JB5 506 aa20.92■□□□□ 0.94
CBX1-202ENST00000393408 MMRN2Q9H8L6 949 aa20.92■□□□□ 0.94
CBX1-202ENST00000393408 FEZ2Q9UHY8 353 aaPredicted RBP20.92■□□□□ 0.94
CBX1-202ENST00000393408 LRRC53A6NM62 1247 aa20.92■□□□□ 0.94
CBX1-202ENST00000393408 MOCS3O95396 460 aa20.92■□□□□ 0.94
CBX1-202ENST00000393408 PLCG2P16885 1265 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms