RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 TOB2Q14106 344 aaPredicted RBP8.87□□□□□ -0.99
HMGB3P1-201ENST00000393368 RUFY3Q7L099 469 aa8.87□□□□□ -0.99
HMGB3P1-201ENST00000393368 HEATR3Q7Z4Q2 680 aa8.87□□□□□ -0.99
HMGB3P1-201ENST00000393368 TLK2Q86UE8 772 aa8.87□□□□□ -0.99
HMGB3P1-201ENST00000393368 FCHSD1Q86WN1 690 aa8.87□□□□□ -0.99
HMGB3P1-201ENST00000393368 ARRDC4Q8NCT1 418 aa8.87□□□□□ -0.99
HMGB3P1-201ENST00000393368 RGS22Q8NE09 1264 aa8.87□□□□□ -0.99
HMGB3P1-201ENST00000393368 IL31RAQ8NI17 732 aa8.87□□□□□ -0.99
HMGB3P1-201ENST00000393368 COPS5Q92905 334 aa8.87□□□□□ -0.99
HMGB3P1-201ENST00000393368 RMDN3Q96TC7 470 aa8.87□□□□□ -0.99
HMGB3P1-201ENST00000393368 LZTS2Q9BRK4 669 aa8.87□□□□□ -0.99
HMGB3P1-201ENST00000393368 ZSWIM6Q9HCJ5 1215 aa8.87□□□□□ -0.99
HMGB3P1-201ENST00000393368 VTA1Q9NP79 307 aa8.87□□□□□ -0.99
HMGB3P1-201ENST00000393368 PXMP2Q9NR77 195 aa8.87□□□□□ -0.99
HMGB3P1-201ENST00000393368 SEC63Q9UGP8 760 aaKnown RBP8.87□□□□□ -0.99
HMGB3P1-201ENST00000393368 A0A1W2PQ45 241 aaPredicted RBP8.86□□□□□ -0.99
HMGB3P1-201ENST00000393368 A0A1W2PQY0 241 aa8.86□□□□□ -0.99
HMGB3P1-201ENST00000393368 GCOM1H8Y6P7 765 aaPredicted RBP8.86□□□□□ -0.99
HMGB3P1-201ENST00000393368 CTAGE5O15320 804 aa8.86□□□□□ -0.99
HMGB3P1-201ENST00000393368 DYNC1LI2O43237 492 aaPredicted RBP8.86□□□□□ -0.99
HMGB3P1-201ENST00000393368 SORBS3O60504 671 aa8.86□□□□□ -0.99
HMGB3P1-201ENST00000393368 ARIH2O95376 493 aa8.86□□□□□ -0.99
HMGB3P1-201ENST00000393368 POLR2MP0CAP2 368 aa8.86□□□□□ -0.99
HMGB3P1-201ENST00000393368 MYCLP12524 364 aaPredicted RBP8.86□□□□□ -0.99
HMGB3P1-201ENST00000393368 PSMA5P28066 241 aa8.86□□□□□ -0.99
HMGB3P1-201ENST00000393368 RTP1P59025 263 aa8.86□□□□□ -0.99
HMGB3P1-201ENST00000393368 CCT2P78371 535 aaKnown RBP8.86□□□□□ -0.99
HMGB3P1-201ENST00000393368 KCNA10Q16322 511 aa8.86□□□□□ -0.99
HMGB3P1-201ENST00000393368 UBE2SQ16763 222 aa8.86□□□□□ -0.99
HMGB3P1-201ENST00000393368 ARHGEF16Q5VV41 709 aa8.86□□□□□ -0.99
HMGB3P1-201ENST00000393368 WWC2Q6AWC2 1192 aa8.86□□□□□ -0.99
HMGB3P1-201ENST00000393368 TYW1BQ6NUM6 668 aa8.86□□□□□ -0.99
HMGB3P1-201ENST00000393368 USP17L6PQ6QN14 398 aa8.86□□□□□ -0.99
HMGB3P1-201ENST00000393368 SEPT14Q6ZU15 432 aa8.86□□□□□ -0.99
HMGB3P1-201ENST00000393368 RNF180Q86T96 592 aa8.86□□□□□ -0.99
HMGB3P1-201ENST00000393368 KLHDC9Q8NEP7 349 aa8.86□□□□□ -0.99
HMGB3P1-201ENST00000393368 DNERQ8NFT8 737 aa8.86□□□□□ -0.99
HMGB3P1-201ENST00000393368 NSUN6Q8TEA1 469 aaKnown RBP8.86□□□□□ -0.99
HMGB3P1-201ENST00000393368 PPP1R13LQ8WUF5 828 aa8.86□□□□□ -0.99
HMGB3P1-201ENST00000393368 WDR11Q9BZH6 1224 aa8.86□□□□□ -0.99
HMGB3P1-201ENST00000393368 NCOA5Q9HCD5 579 aaKnown RBP8.86□□□□□ -0.99
HMGB3P1-201ENST00000393368 RBM28Q9NW13 759 aaKnown RBP8.86□□□□□ -0.99
HMGB3P1-201ENST00000393368 PHF24Q9UPV7 400 aa8.86□□□□□ -0.99
HMGB3P1-201ENST00000393368 GNEQ9Y223 722 aaKnown RBP8.86□□□□□ -0.99
HMGB3P1-201ENST00000393368 ATP11BQ9Y2G3 1177 aa8.86□□□□□ -0.99
HMGB3P1-201ENST00000393368 CYP46A1Q9Y6A2 500 aa8.86□□□□□ -0.99
HMGB3P1-201ENST00000393368 ALPK3Q96L96 1907 aa8.86□□□□□ -0.99
HMGB3P1-201ENST00000393368 MCM3APO60318 1980 aa8.85□□□□□ -0.99
HMGB3P1-201ENST00000393368 EPB41L2O43491 1005 aaKnown RBP8.85□□□□□ -0.99
HMGB3P1-201ENST00000393368 ASGR1P07306 291 aa8.85□□□□□ -0.99
HMGB3P1-201ENST00000393368 CAPN2P17655 700 aa8.85□□□□□ -0.99
HMGB3P1-201ENST00000393368 SMARCA1P28370 1054 aa8.85□□□□□ -0.99
HMGB3P1-201ENST00000393368 ACLYP53396 1101 aa8.85□□□□□ -0.99
HMGB3P1-201ENST00000393368 GJA9P57773 515 aa8.85□□□□□ -0.99
HMGB3P1-201ENST00000393368 GHRHRQ02643 423 aa8.85□□□□□ -0.99
HMGB3P1-201ENST00000393368 STK3Q13188 491 aa8.85□□□□□ -0.99
HMGB3P1-201ENST00000393368 FSCN1Q16658 493 aaKnown RBP8.85□□□□□ -0.99
HMGB3P1-201ENST00000393368 LY6KQ17RY6 165 aa8.85□□□□□ -0.99
HMGB3P1-201ENST00000393368 TRIM60Q495X7 471 aa8.85□□□□□ -0.99
HMGB3P1-201ENST00000393368 C8orf34Q49A92 452 aa8.85□□□□□ -0.99
HMGB3P1-201ENST00000393368 GNASQ5JWF2 1037 aa8.85□□□□□ -0.99
HMGB3P1-201ENST00000393368 CCSAPQ6IQ19 270 aaPredicted RBP8.85□□□□□ -0.99
HMGB3P1-201ENST00000393368 SLC39A5Q6ZMH5 540 aa8.85□□□□□ -0.99
HMGB3P1-201ENST00000393368 PHKBQ93100 1093 aa8.85□□□□□ -0.99
HMGB3P1-201ENST00000393368 PDCD2LQ9BRP1 358 aa8.85□□□□□ -0.99
HMGB3P1-201ENST00000393368 AGXT2Q9BYV1 514 aa8.85□□□□□ -0.99
HMGB3P1-201ENST00000393368 UPF3AQ9H1J1 476 aaKnown RBP8.85□□□□□ -0.99
HMGB3P1-201ENST00000393368 V9GY48 417 aaPredicted RBP8.85□□□□□ -0.99
HMGB3P1-201ENST00000393368 RBM47A0AV96 593 aaKnown RBP8.84□□□□□ -0.99
HMGB3P1-201ENST00000393368 MEIS2O14770 477 aa8.84□□□□□ -0.99
HMGB3P1-201ENST00000393368 ADAMTS3O15072 1205 aa8.84□□□□□ -0.99
HMGB3P1-201ENST00000393368 PQBP1O60828 265 aaKnown RBP8.84□□□□□ -0.99
HMGB3P1-201ENST00000393368 NR3C2P08235 984 aa8.84□□□□□ -0.99
HMGB3P1-201ENST00000393368 TXNP10599 105 aaKnown RBP8.84□□□□□ -0.99
HMGB3P1-201ENST00000393368 PDIA3P30101 505 aaKnown RBP8.84□□□□□ -0.99
HMGB3P1-201ENST00000393368 NAPAP54920 295 aa8.84□□□□□ -0.99
HMGB3P1-201ENST00000393368 PSMC6P62333 389 aa8.84□□□□□ -0.99
HMGB3P1-201ENST00000393368 PGM5Q15124 567 aa8.84□□□□□ -0.99
HMGB3P1-201ENST00000393368 PPP2R5BQ15173 497 aa8.84□□□□□ -0.99
HMGB3P1-201ENST00000393368 STXBP2Q15833 593 aa8.84□□□□□ -0.99
HMGB3P1-201ENST00000393368 DUSP28Q4G0W2 176 aa8.84□□□□□ -0.99
HMGB3P1-201ENST00000393368 IQSEC1Q6DN90 963 aa8.84□□□□□ -0.99
HMGB3P1-201ENST00000393368 CXCL17Q6UXB2 119 aa8.84□□□□□ -0.99
HMGB3P1-201ENST00000393368 OR6J1Q8NGC5 347 aa8.84□□□□□ -0.99
HMGB3P1-201ENST00000393368 SMARCC2Q8TAQ2 1214 aa8.84□□□□□ -0.99
HMGB3P1-201ENST00000393368 PGBD1Q96JS3 809 aa8.84□□□□□ -0.99
HMGB3P1-201ENST00000393368 MPHOSPH6Q99547 160 aaKnown RBP8.84□□□□□ -0.99
HMGB3P1-201ENST00000393368 TM6SF1Q9BZW5 370 aa8.84□□□□□ -0.99
HMGB3P1-201ENST00000393368 AP5M1Q9H0R1 490 aa8.84□□□□□ -0.99
HMGB3P1-201ENST00000393368 SPC25Q9HBM1 224 aa8.84□□□□□ -0.99
HMGB3P1-201ENST00000393368 PRDM5Q9NQX1 630 aaPredicted RBP8.84□□□□□ -0.99
HMGB3P1-201ENST00000393368 STARD7Q9NQZ5 370 aa8.84□□□□□ -0.99
HMGB3P1-201ENST00000393368 PDRG1Q9NUG6 133 aa8.84□□□□□ -0.99
HMGB3P1-201ENST00000393368 NR2E3Q9Y5X4 410 aa8.84□□□□□ -0.99
HMGB3P1-201ENST00000393368 NID2Q14112 1375 aa8.84□□□□□ -0.99
HMGB3P1-201ENST00000393368 RANBP2P49792 3224 aaKnown RBP8.83□□□□□ -1
HMGB3P1-201ENST00000393368 LOC102724159A0A0B4J2E5 919 aa8.83□□□□□ -1
HMGB3P1-201ENST00000393368 HAX1O00165 279 aa8.83□□□□□ -1
HMGB3P1-201ENST00000393368 STXBP3O00186 592 aa8.83□□□□□ -1
HMGB3P1-201ENST00000393368 RGS20O76081 388 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms