RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 TRPC5Q9UL62 973 aaPredicted RBP11.67□□□□□ -0.54
CALD1-203ENST00000393118 ARFGEF2Q9Y6D5 1785 aa11.67□□□□□ -0.54
CALD1-203ENST00000393118 H0YIN7 160 aa11.66□□□□□ -0.54
CALD1-203ENST00000393118 ERLIN2O94905 339 aa11.66□□□□□ -0.54
CALD1-203ENST00000393118 FAM13AO94988 1023 aa11.66□□□□□ -0.54
CALD1-203ENST00000393118 MCM3P25205 808 aa11.66□□□□□ -0.54
CALD1-203ENST00000393118 HDXQ7Z353 690 aa11.66□□□□□ -0.54
CALD1-203ENST00000393118 CCDC84Q86UT8 332 aaPredicted RBP11.66□□□□□ -0.54
CALD1-203ENST00000393118 SLC51AQ86UW1 340 aa11.66□□□□□ -0.54
CALD1-203ENST00000393118 REXO1L1PQ8IX06 675 aa11.66□□□□□ -0.54
CALD1-203ENST00000393118 MAD2L2Q9UI95 211 aa11.66□□□□□ -0.54
CALD1-203ENST00000393118 USP17L10C9JJH3 530 aa11.66□□□□□ -0.54
CALD1-203ENST00000393118 DDX39AO00148 427 aaKnown RBP11.66□□□□□ -0.54
CALD1-203ENST00000393118 STXBP3O00186 592 aa11.66□□□□□ -0.54
CALD1-203ENST00000393118 CETN3O15182 167 aa11.66□□□□□ -0.54
CALD1-203ENST00000393118 RABGGTAQ92696 567 aa11.66□□□□□ -0.54
CALD1-203ENST00000393118 GJD4Q96KN9 370 aaPredicted RBP11.66□□□□□ -0.54
CALD1-203ENST00000393118 HAUS4Q9H6D7 363 aa11.66□□□□□ -0.54
CALD1-203ENST00000393118 DAGLAQ9Y4D2 1042 aa11.66□□□□□ -0.54
CALD1-203ENST00000393118 AFF2P51816 1311 aa11.66□□□□□ -0.54
CALD1-203ENST00000393118 BUB1O43683 1085 aa11.66□□□□□ -0.54
CALD1-203ENST00000393118 ACTN2P35609 894 aa11.66□□□□□ -0.54
CALD1-203ENST00000393118 UBXN2AP68543 259 aa11.66□□□□□ -0.54
CALD1-203ENST00000393118 PABPC4Q13310 644 aaKnown RBP eCLIP11.66□□□□□ -0.54
CALD1-203ENST00000393118 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.66□□□□□ -0.54
CALD1-203ENST00000393118 DNM3Q9UQ16 869 aa11.66□□□□□ -0.54
CALD1-203ENST00000393118 TCP10L2B9ZVM9 353 aa11.66□□□□□ -0.54
CALD1-203ENST00000393118 GYPCP04921 128 aa11.66□□□□□ -0.54
CALD1-203ENST00000393118 MMP10P09238 476 aa11.66□□□□□ -0.54
CALD1-203ENST00000393118 MDM2Q00987 491 aaPredicted RBP11.66□□□□□ -0.54
CALD1-203ENST00000393118 STK4Q13043 487 aa11.66□□□□□ -0.54
CALD1-203ENST00000393118 HAUS3Q68CZ6 603 aa11.66□□□□□ -0.54
CALD1-203ENST00000393118 CUEDC2Q9H467 287 aa11.66□□□□□ -0.54
CALD1-203ENST00000393118 ADAMTSL3P82987 1691 aa11.66□□□□□ -0.54
CALD1-203ENST00000393118 ATRNO75882 1429 aa11.65□□□□□ -0.54
CALD1-203ENST00000393118 ATP2C2O75185 946 aa11.65□□□□□ -0.54
CALD1-203ENST00000393118 KANSL2Q9H9L4 492 aa11.65□□□□□ -0.54
CALD1-203ENST00000393118 INTS13Q9NVM9 706 aa11.65□□□□□ -0.54
CALD1-203ENST00000393118 TFR2Q9UP52 801 aa11.65□□□□□ -0.54
CALD1-203ENST00000393118 CEP83Q9Y592 693 aa11.65□□□□□ -0.54
CALD1-203ENST00000393118 CLRN2A0PK11 232 aa11.65□□□□□ -0.54
CALD1-203ENST00000393118 LGALS16A8MUM7 142 aa11.65□□□□□ -0.54
CALD1-203ENST00000393118 CCDC172P0C7W6 258 aa11.65□□□□□ -0.54
CALD1-203ENST00000393118 GBP2P32456 591 aaPredicted RBP11.65□□□□□ -0.54
CALD1-203ENST00000393118 GPATCH4Q5T3I0 446 aaKnown RBP11.65□□□□□ -0.54
CALD1-203ENST00000393118 NLGN1Q8N2Q7 840 aa11.65□□□□□ -0.54
CALD1-203ENST00000393118 KIFC2Q96AC6 838 aa11.65□□□□□ -0.54
CALD1-203ENST00000393118 LSM14BQ9BX40 385 aaKnown RBP11.65□□□□□ -0.54
CALD1-203ENST00000393118 GEMIN8Q9NWZ8 242 aaKnown RBP11.65□□□□□ -0.54
CALD1-203ENST00000393118 PCDHB13Q9Y5F0 798 aa11.65□□□□□ -0.54
CALD1-203ENST00000393118 SRGAP2O75044 1071 aa11.65□□□□□ -0.55
CALD1-203ENST00000393118 GCNT3O95395 438 aa11.65□□□□□ -0.55
CALD1-203ENST00000393118 SARSP49591 514 aaKnown RBP11.65□□□□□ -0.55
CALD1-203ENST00000393118 POLR2FP61218 127 aaKnown RBP11.65□□□□□ -0.55
CALD1-203ENST00000393118 NAA25Q14CX7 972 aa11.65□□□□□ -0.55
CALD1-203ENST00000393118 TNIP1Q15025 636 aa11.65□□□□□ -0.55
CALD1-203ENST00000393118 RCSD1Q6JBY9 416 aa11.65□□□□□ -0.55
CALD1-203ENST00000393118 TPH2Q8IWU9 490 aa11.65□□□□□ -0.55
CALD1-203ENST00000393118 IFT81Q8WYA0 676 aa11.65□□□□□ -0.55
CALD1-203ENST00000393118 DDX12PQ92771 950 aa11.65□□□□□ -0.55
CALD1-203ENST00000393118 TRIM10Q9UDY6 481 aa11.65□□□□□ -0.55
CALD1-203ENST00000393118 PPIP5K2O43314 1243 aa11.64□□□□□ -0.55
CALD1-203ENST00000393118 ZNF18P17022 549 aa11.64□□□□□ -0.55
CALD1-203ENST00000393118 MRPS25P82663 173 aaKnown RBP11.64□□□□□ -0.55
CALD1-203ENST00000393118 LONRF2Q1L5Z9 754 aa11.64□□□□□ -0.55
CALD1-203ENST00000393118 SLC9C1Q4G0N8 1177 aa11.64□□□□□ -0.55
CALD1-203ENST00000393118 CPXCR1Q8N123 301 aa11.64□□□□□ -0.55
CALD1-203ENST00000393118 TRIM9Q9C026 710 aa11.64□□□□□ -0.55
CALD1-203ENST00000393118 COA1Q9GZY4 146 aa11.64□□□□□ -0.55
CALD1-203ENST00000393118 NT5C3AQ9H0P0 336 aa11.64□□□□□ -0.55
CALD1-203ENST00000393118 THAP9Q9H5L6 903 aa11.64□□□□□ -0.55
CALD1-203ENST00000393118 FRMD3A2A2Y4 597 aa11.64□□□□□ -0.55
CALD1-203ENST00000393118 TADA3O75528 432 aa11.64□□□□□ -0.55
CALD1-203ENST00000393118 CXCR5P32302 372 aa11.64□□□□□ -0.55
CALD1-203ENST00000393118 PDE6BP35913 854 aa11.64□□□□□ -0.55
CALD1-203ENST00000393118 KCNJ6P48051 423 aa11.64□□□□□ -0.55
CALD1-203ENST00000393118 PPARDQ03181 441 aa11.64□□□□□ -0.55
CALD1-203ENST00000393118 ANKRD40Q6AI12 368 aa11.64□□□□□ -0.55
CALD1-203ENST00000393118 NHEJ1Q9H9Q4 299 aaPredicted RBP11.64□□□□□ -0.55
CALD1-203ENST00000393118 PNMA6FA0A0J9YX94 578 aa11.64□□□□□ -0.55
CALD1-203ENST00000393118 HOXA13P31271 388 aaPredicted RBP11.64□□□□□ -0.55
CALD1-203ENST00000393118 WHAMMP3Q1A5X7 153 aa11.64□□□□□ -0.55
CALD1-203ENST00000393118 KRT27Q7Z3Y8 459 aa11.64□□□□□ -0.55
CALD1-203ENST00000393118 FBXO11Q86XK2 927 aa11.64□□□□□ -0.55
CALD1-203ENST00000393118 ADGRF4Q8IZF3 695 aa11.64□□□□□ -0.55
CALD1-203ENST00000393118 ADSSL1Q8N142 457 aa11.64□□□□□ -0.55
CALD1-203ENST00000393118 RDH13Q8NBN7 331 aa11.64□□□□□ -0.55
CALD1-203ENST00000393118 PDE11AQ9HCR9 933 aa11.64□□□□□ -0.55
CALD1-203ENST00000393118 HDAC6Q9UBN7 1215 aa11.64□□□□□ -0.55
CALD1-203ENST00000393118 KLHL30Q0D2K2 578 aa11.63□□□□□ -0.55
CALD1-203ENST00000393118 ABCB5Q2M3G0 1257 aa11.63□□□□□ -0.55
CALD1-203ENST00000393118 ZNF384Q8TF68 577 aa11.63□□□□□ -0.55
CALD1-203ENST00000393118 NDST4Q9H3R1 872 aa11.63□□□□□ -0.55
CALD1-203ENST00000393118 MAGEF1Q9HAY2 307 aa11.63□□□□□ -0.55
CALD1-203ENST00000393118 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.63□□□□□ -0.55
CALD1-203ENST00000393118 MTMR4Q9NYA4 1195 aa11.63□□□□□ -0.55
CALD1-203ENST00000393118 POLLQ9UGP5 575 aa11.63□□□□□ -0.55
CALD1-203ENST00000393118 TRPM3Q9HCF6 1732 aaPredicted RBP11.63□□□□□ -0.55
CALD1-203ENST00000393118 GOLGA6L10A6NI86 522 aa11.63□□□□□ -0.55
CALD1-203ENST00000393118 EIF3CLB5ME19 914 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms