RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 EPN3Q9H201 632 aa4.06□□□□□ -1.76
XRN1-202ENST00000392981 EIF2B3Q9NR50 452 aaKnown RBP4.06□□□□□ -1.76
XRN1-202ENST00000392981 IKBKGQ9Y6K9 419 aa4.06□□□□□ -1.76
XRN1-202ENST00000392981 A0A1W2PQU0 124 aa4.05□□□□□ -1.76
XRN1-202ENST00000392981 CD4P01730 458 aa4.05□□□□□ -1.76
XRN1-202ENST00000392981 POU3F3P20264 500 aaPredicted RBP4.05□□□□□ -1.76
XRN1-202ENST00000392981 SCP2P22307 547 aa4.05□□□□□ -1.76
XRN1-202ENST00000392981 STT3AP46977 705 aa4.05□□□□□ -1.76
XRN1-202ENST00000392981 PRKG2Q13237 762 aa4.05□□□□□ -1.76
XRN1-202ENST00000392981 PTPN14Q15678 1187 aa4.05□□□□□ -1.76
XRN1-202ENST00000392981 FAM209BQ5JX69 171 aa4.05□□□□□ -1.76
XRN1-202ENST00000392981 METTL24Q5JXM2 366 aa4.05□□□□□ -1.76
XRN1-202ENST00000392981 MZT2BQ6NZ67 158 aa4.05□□□□□ -1.76
XRN1-202ENST00000392981 RFX8Q6ZV50 586 aa4.05□□□□□ -1.76
XRN1-202ENST00000392981 LAPTM4BQ86VI4 370 aa4.05□□□□□ -1.76
XRN1-202ENST00000392981 ERCC4Q92889 916 aaPredicted RBP4.05□□□□□ -1.76
XRN1-202ENST00000392981 ZNF566Q969W8 418 aa4.05□□□□□ -1.76
XRN1-202ENST00000392981 HHIPQ96QV1 700 aa4.05□□□□□ -1.76
XRN1-202ENST00000392981 INTS7Q9NVH2 962 aaKnown RBP4.05□□□□□ -1.76
XRN1-202ENST00000392981 GPRC5BQ9NZH0 403 aa4.05□□□□□ -1.76
XRN1-202ENST00000392981 J3QW42 95 aa4.05□□□□□ -1.76
XRN1-202ENST00000392981 K7ENM7 598 aa4.05□□□□□ -1.76
XRN1-202ENST00000392981 ELL2O00472 640 aaPredicted RBP4.05□□□□□ -1.76
XRN1-202ENST00000392981 P4HA2O15460 535 aa4.05□□□□□ -1.76
XRN1-202ENST00000392981 MMP20O60882 483 aa4.05□□□□□ -1.76
XRN1-202ENST00000392981 CLEC3AO75596 197 aa4.05□□□□□ -1.76
XRN1-202ENST00000392981 ATP1A3P13637 1013 aa4.05□□□□□ -1.76
XRN1-202ENST00000392981 GRIA2P42262 883 aa4.05□□□□□ -1.76
XRN1-202ENST00000392981 KIF22Q14807 665 aa4.05□□□□□ -1.76
XRN1-202ENST00000392981 MEX3CQ5U5Q3 659 aaKnown RBP4.05□□□□□ -1.76
XRN1-202ENST00000392981 DCAF15Q66K64 600 aa4.05□□□□□ -1.76
XRN1-202ENST00000392981 CPLX2Q6PUV4 134 aaKnown RBP4.05□□□□□ -1.76
XRN1-202ENST00000392981 RAPH1Q70E73 1250 aa4.05□□□□□ -1.76
XRN1-202ENST00000392981 C17orf53Q8N3J3 647 aaPredicted RBP4.05□□□□□ -1.76
XRN1-202ENST00000392981 STAG2Q8N3U4 1231 aa4.05□□□□□ -1.76
XRN1-202ENST00000392981 FAM26EQ8N5C1 309 aa4.05□□□□□ -1.76
XRN1-202ENST00000392981 GBP5Q96PP8 586 aa4.05□□□□□ -1.76
XRN1-202ENST00000392981 PRKRIP1Q9H875 184 aaPredicted RBP4.05□□□□□ -1.76
XRN1-202ENST00000392981 STRN4Q9NRL3 753 aa4.05□□□□□ -1.76
XRN1-202ENST00000392981 TRMT13Q9NUP7 481 aaKnown RBP4.05□□□□□ -1.76
XRN1-202ENST00000392981 SLC45A1Q9Y2W3 748 aa4.05□□□□□ -1.76
XRN1-202ENST00000392981 LRRFIP2Q9Y608 721 aaKnown RBP4.05□□□□□ -1.76
XRN1-202ENST00000392981 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.05□□□□□ -1.76
XRN1-202ENST00000392981 DCDC2BA2VCK2 349 aa4.05□□□□□ -1.76
XRN1-202ENST00000392981 RHCEP18577 417 aa4.05□□□□□ -1.76
XRN1-202ENST00000392981 ADD1P35611 737 aaKnown RBP4.05□□□□□ -1.76
XRN1-202ENST00000392981 PRPHP41219 470 aa4.05□□□□□ -1.76
XRN1-202ENST00000392981 SKOR1P84550 965 aa4.05□□□□□ -1.76
XRN1-202ENST00000392981 RHDQ02161 417 aa4.05□□□□□ -1.76
XRN1-202ENST00000392981 PPFIA1Q13136 1202 aa4.05□□□□□ -1.76
XRN1-202ENST00000392981 DHCR24Q15392 516 aa4.05□□□□□ -1.76
XRN1-202ENST00000392981 CCDC158Q5M9N0 1113 aa4.05□□□□□ -1.76
XRN1-202ENST00000392981 GDF6Q6KF10 455 aaPredicted RBP4.05□□□□□ -1.76
XRN1-202ENST00000392981 AFAP1L1Q8TED9 768 aa4.05□□□□□ -1.76
XRN1-202ENST00000392981 NOL6Q9H6R4 1146 aaKnown RBP4.05□□□□□ -1.76
XRN1-202ENST00000392981 SPTLC3Q9NUV7 552 aa4.05□□□□□ -1.76
XRN1-202ENST00000392981 GTF2IRD1Q9UHL9 959 aa4.05□□□□□ -1.76
XRN1-202ENST00000392981 RASAL2Q9UJF2 1139 aa4.05□□□□□ -1.76
XRN1-202ENST00000392981 RPS6KA6Q9UK32 745 aa4.05□□□□□ -1.76
XRN1-202ENST00000392981 HNRNPCL1O60812 293 aaKnown RBP4.05□□□□□ -1.76
XRN1-202ENST00000392981 TBCAO75347 108 aaKnown RBP4.05□□□□□ -1.76
XRN1-202ENST00000392981 MMP16P51512 607 aa4.05□□□□□ -1.76
XRN1-202ENST00000392981 FOXK2Q01167 660 aa4.05□□□□□ -1.76
XRN1-202ENST00000392981 UBXN1Q04323 297 aa4.05□□□□□ -1.76
XRN1-202ENST00000392981 TRIM32Q13049 653 aa4.05□□□□□ -1.76
XRN1-202ENST00000392981 SLC12A1Q13621 1099 aa4.05□□□□□ -1.76
XRN1-202ENST00000392981 DLGAP5Q15398 846 aa4.05□□□□□ -1.76
XRN1-202ENST00000392981 CDC37Q16543 378 aaPredicted RBP4.05□□□□□ -1.76
XRN1-202ENST00000392981 TMEM266Q2M3C6 531 aa4.05□□□□□ -1.76
XRN1-202ENST00000392981 FAM47CQ5HY64 1035 aa4.05□□□□□ -1.76
XRN1-202ENST00000392981 LVRNQ6Q4G3 990 aa4.05□□□□□ -1.76
XRN1-202ENST00000392981 ANKRD23Q86SG2 305 aa4.05□□□□□ -1.76
XRN1-202ENST00000392981 SLC41A1Q8IVJ1 513 aa4.05□□□□□ -1.76
XRN1-202ENST00000392981 TBC1D20Q96BZ9 403 aa4.05□□□□□ -1.76
XRN1-202ENST00000392981 CORO1BQ9BR76 489 aa4.05□□□□□ -1.76
XRN1-202ENST00000392981 USP26Q9BXU7 913 aa4.05□□□□□ -1.76
XRN1-202ENST00000392981 PDGFDQ9GZP0 370 aaPredicted RBP4.05□□□□□ -1.76
XRN1-202ENST00000392981 QRSL1Q9H0R6 528 aaKnown RBP4.05□□□□□ -1.76
XRN1-202ENST00000392981 SAGE1Q9NXZ1 904 aa4.05□□□□□ -1.76
XRN1-202ENST00000392981 ZHX1Q9UKY1 873 aaPredicted RBP4.05□□□□□ -1.76
XRN1-202ENST00000392981 CYP8B1Q9UNU6 501 aa4.05□□□□□ -1.76
XRN1-202ENST00000392981 PCDHA11Q9Y5I1 949 aa4.05□□□□□ -1.76
XRN1-202ENST00000392981 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.04□□□□□ -1.76
XRN1-202ENST00000392981 ADCY3O60266 1144 aa4.04□□□□□ -1.76
XRN1-202ENST00000392981 RFPL1O75677 317 aa4.04□□□□□ -1.76
XRN1-202ENST00000392981 SLU7O95391 586 aaKnown RBP4.04□□□□□ -1.76
XRN1-202ENST00000392981 ADCYAP1R1P41586 468 aa4.04□□□□□ -1.76
XRN1-202ENST00000392981 CACNB2Q08289 660 aaPredicted RBP4.04□□□□□ -1.76
XRN1-202ENST00000392981 SFSWAPQ12872 951 aaKnown RBP4.04□□□□□ -1.76
XRN1-202ENST00000392981 ODF1Q14990 250 aa4.04□□□□□ -1.76
XRN1-202ENST00000392981 RNF220Q5VTB9 566 aa4.04□□□□□ -1.76
XRN1-202ENST00000392981 GPR153Q6NV75 609 aa4.04□□□□□ -1.76
XRN1-202ENST00000392981 ENOSF1Q7L5Y1 443 aa4.04□□□□□ -1.76
XRN1-202ENST00000392981 OTOP3Q7RTS5 596 aa4.04□□□□□ -1.76
XRN1-202ENST00000392981 REXO1Q8N1G1 1221 aaKnown RBP4.04□□□□□ -1.76
XRN1-202ENST00000392981 KIAA1958Q8N8K9 716 aa4.04□□□□□ -1.76
XRN1-202ENST00000392981 GIMAP8Q8ND71 665 aaPredicted RBP4.04□□□□□ -1.76
XRN1-202ENST00000392981 THAP11Q96EK4 314 aa4.04□□□□□ -1.76
XRN1-202ENST00000392981 UBXN10Q96LJ8 280 aa4.04□□□□□ -1.76
XRN1-202ENST00000392981 NAA15Q9BXJ9 866 aaKnown RBP4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms