RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 ASIC1P78348 528 aa12.08□□□□□ -0.48
BRF1-204ENST00000392557 SOGA3Q5TF21 947 aa12.08□□□□□ -0.48
BRF1-204ENST00000392557 C15orf52Q6ZUT6 534 aaKnown RBP12.08□□□□□ -0.48
BRF1-204ENST00000392557 C16orf86Q6ZW13 317 aa12.08□□□□□ -0.48
BRF1-204ENST00000392557 ANKRD13CQ8N6S4 541 aa12.08□□□□□ -0.48
BRF1-204ENST00000392557 PIGSQ96S52 555 aa12.08□□□□□ -0.48
BRF1-204ENST00000392557 HAUS4Q9H6D7 363 aa12.08□□□□□ -0.48
BRF1-204ENST00000392557 H0YIN7 160 aa12.08□□□□□ -0.48
BRF1-204ENST00000392557 TULP2O00295 520 aa12.08□□□□□ -0.48
BRF1-204ENST00000392557 AKR1B10O60218 316 aa12.08□□□□□ -0.48
BRF1-204ENST00000392557 TUBB4BP68371 445 aa12.08□□□□□ -0.48
BRF1-204ENST00000392557 NFIAQ12857 509 aa12.08□□□□□ -0.48
BRF1-204ENST00000392557 SLC35G1Q2M3R5 365 aa12.08□□□□□ -0.48
BRF1-204ENST00000392557 LETM2Q2VYF4 491 aa12.08□□□□□ -0.48
BRF1-204ENST00000392557 ZNF658Q5TYW1 1059 aaPredicted RBP12.08□□□□□ -0.48
BRF1-204ENST00000392557 APTXQ7Z2E3 356 aaKnown RBP12.08□□□□□ -0.48
BRF1-204ENST00000392557 MICALL1Q8N3F8 863 aa12.08□□□□□ -0.48
BRF1-204ENST00000392557 MASTLQ96GX5 879 aa12.08□□□□□ -0.48
BRF1-204ENST00000392557 MMRN2Q9H8L6 949 aa12.08□□□□□ -0.48
BRF1-204ENST00000392557 SND1Q7KZF4 910 aaKnown RBP eCLIP12.07□□□□□ -0.48
BRF1-204ENST00000392557 ELOA2Q8IYF1 753 aaPredicted RBP12.07□□□□□ -0.48
BRF1-204ENST00000392557 HNRNPLLQ8WVV9 542 aaKnown RBP12.07□□□□□ -0.48
BRF1-204ENST00000392557 CENPHQ9H3R5 247 aa12.07□□□□□ -0.48
BRF1-204ENST00000392557 PCDHA4Q9UN74 947 aa12.07□□□□□ -0.48
BRF1-204ENST00000392557 DUSP10Q9Y6W6 482 aa12.07□□□□□ -0.48
BRF1-204ENST00000392557 MCM3P25205 808 aa12.07□□□□□ -0.48
BRF1-204ENST00000392557 KLK7P49862 253 aa12.07□□□□□ -0.48
BRF1-204ENST00000392557 CKAP4Q07065 602 aaKnown RBP12.07□□□□□ -0.48
BRF1-204ENST00000392557 KCTD19Q17RG1 926 aaPredicted RBP12.07□□□□□ -0.48
BRF1-204ENST00000392557 ZNF772Q68DY9 489 aaPredicted RBP12.07□□□□□ -0.48
BRF1-204ENST00000392557 MSANTD4Q8NCY6 345 aa12.07□□□□□ -0.48
BRF1-204ENST00000392557 SMCR8Q8TEV9 937 aaPredicted RBP12.07□□□□□ -0.48
BRF1-204ENST00000392557 TEKT1Q969V4 418 aa12.07□□□□□ -0.48
BRF1-204ENST00000392557 RRP36Q96EU6 259 aaKnown RBP12.07□□□□□ -0.48
BRF1-204ENST00000392557 NOC4LQ9BVI4 516 aaKnown RBP12.07□□□□□ -0.48
BRF1-204ENST00000392557 FAM207AQ9NSI2 230 aaPredicted RBP12.07□□□□□ -0.48
BRF1-204ENST00000392557 AGPAT5Q9NUQ2 364 aa12.07□□□□□ -0.48
BRF1-204ENST00000392557 BIN2Q9UBW5 565 aaPredicted RBP12.07□□□□□ -0.48
BRF1-204ENST00000392557 H7C1D1 291 aa12.07□□□□□ -0.48
BRF1-204ENST00000392557 RXRBP28702 533 aa12.07□□□□□ -0.48
BRF1-204ENST00000392557 EN1Q05925 392 aaPredicted RBP12.07□□□□□ -0.48
BRF1-204ENST00000392557 TTC31Q49AM3 519 aaPredicted RBP12.07□□□□□ -0.48
BRF1-204ENST00000392557 NEDD1Q8NHV4 660 aa12.07□□□□□ -0.48
BRF1-204ENST00000392557 TUBGCP2Q9BSJ2 902 aa12.07□□□□□ -0.48
BRF1-204ENST00000392557 MED4Q9NPJ6 270 aa12.07□□□□□ -0.48
BRF1-204ENST00000392557 EXOC1Q9NV70 894 aa12.07□□□□□ -0.48
BRF1-204ENST00000392557 BRWD3Q6RI45 1802 aa12.06□□□□□ -0.48
BRF1-204ENST00000392557 GOLGA6BA6NDN3 693 aa12.06□□□□□ -0.48
BRF1-204ENST00000392557 SMCO2A6NFE2 343 aa12.06□□□□□ -0.48
BRF1-204ENST00000392557 SLC16A2P36021 539 aa12.06□□□□□ -0.48
BRF1-204ENST00000392557 GGCXP38435 758 aa12.06□□□□□ -0.48
BRF1-204ENST00000392557 ARHGAP25P42331 645 aa12.06□□□□□ -0.48
BRF1-204ENST00000392557 RNASE9P60153 205 aaKnown RBP12.06□□□□□ -0.48
BRF1-204ENST00000392557 SLC7A5Q01650 507 aa12.06□□□□□ -0.48
BRF1-204ENST00000392557 PDE4DQ08499 809 aa12.06□□□□□ -0.48
BRF1-204ENST00000392557 KRT26Q7Z3Y9 468 aa12.06□□□□□ -0.48
BRF1-204ENST00000392557 MB21D1Q8N884 522 aa12.06□□□□□ -0.48
BRF1-204ENST00000392557 SPATA20Q8TB22 786 aa12.06□□□□□ -0.48
BRF1-204ENST00000392557 COA7Q96BR5 231 aa12.06□□□□□ -0.48
BRF1-204ENST00000392557 UBXN6Q9BZV1 441 aa12.06□□□□□ -0.48
BRF1-204ENST00000392557 MYO1AQ9UBC5 1043 aa12.06□□□□□ -0.48
BRF1-204ENST00000392557 LIMA1Q9UHB6 759 aaKnown RBP12.06□□□□□ -0.48
BRF1-204ENST00000392557 SERPINB13Q9UIV8 391 aa12.06□□□□□ -0.48
BRF1-204ENST00000392557 RAB21Q9UL25 225 aa12.06□□□□□ -0.48
BRF1-204ENST00000392557 GOLGA6CA6NDK9 693 aa12.06□□□□□ -0.48
BRF1-204ENST00000392557 MARCH6O60337 910 aa12.06□□□□□ -0.48
BRF1-204ENST00000392557 TUBBP07437 444 aa12.06□□□□□ -0.48
BRF1-204ENST00000392557 GOLGA6DP0CG33 693 aa12.06□□□□□ -0.48
BRF1-204ENST00000392557 ATP2C1P98194 919 aaPredicted RBP12.06□□□□□ -0.48
BRF1-204ENST00000392557 TDRD12Q587J7 1177 aaKnown RBP12.06□□□□□ -0.48
BRF1-204ENST00000392557 EHBP1Q8NDI1 1231 aa12.06□□□□□ -0.48
BRF1-204ENST00000392557 FAM76AQ8TAV0 307 aa12.06□□□□□ -0.48
BRF1-204ENST00000392557 TNFRSF25Q93038 417 aa12.06□□□□□ -0.48
BRF1-204ENST00000392557 TCP11L1Q9NUJ3 509 aa12.06□□□□□ -0.48
BRF1-204ENST00000392557 GOLGA6AQ9NYA3 693 aa12.06□□□□□ -0.48
BRF1-204ENST00000392557 CCNT1O60563 726 aaKnown RBP12.05□□□□□ -0.48
BRF1-204ENST00000392557 USO1O60763 962 aaKnown RBP12.05□□□□□ -0.48
BRF1-204ENST00000392557 IQCEQ6IPM2 695 aa12.05□□□□□ -0.48
BRF1-204ENST00000392557 CDC42EP5Q6NZY7 148 aa12.05□□□□□ -0.48
BRF1-204ENST00000392557 TMED8Q6PL24 325 aaPredicted RBP12.05□□□□□ -0.48
BRF1-204ENST00000392557 ZFPM1Q8IX07 1006 aa12.05□□□□□ -0.48
BRF1-204ENST00000392557 CNPY4Q8N129 248 aa12.05□□□□□ -0.48
BRF1-204ENST00000392557 SECISBP2LQ93073 1101 aaKnown RBP12.05□□□□□ -0.48
BRF1-204ENST00000392557 AKT1S1Q96B36 256 aa12.05□□□□□ -0.48
BRF1-204ENST00000392557 POLD4Q9HCU8 107 aa12.05□□□□□ -0.48
BRF1-204ENST00000392557 EIF3CLB5ME19 914 aaKnown RBP12.05□□□□□ -0.48
BRF1-204ENST00000392557 HLA-DOAP06340 250 aa12.05□□□□□ -0.48
BRF1-204ENST00000392557 PMS1P54277 932 aaKnown RBP12.05□□□□□ -0.48
BRF1-204ENST00000392557 AOC3Q16853 763 aa12.05□□□□□ -0.48
BRF1-204ENST00000392557 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.05□□□□□ -0.48
BRF1-204ENST00000392557 TMC4Q7Z404 712 aa12.05□□□□□ -0.48
BRF1-204ENST00000392557 EIF3CQ99613 913 aaKnown RBP12.05□□□□□ -0.48
BRF1-204ENST00000392557 PYM1Q9BRP8 204 aaKnown RBP12.05□□□□□ -0.48
BRF1-204ENST00000392557 NHEJ1Q9H9Q4 299 aaPredicted RBP12.05□□□□□ -0.48
BRF1-204ENST00000392557 SSBP05455 408 aaKnown RBP eCLIP12.05□□□□□ -0.48
BRF1-204ENST00000392557 PBX1P40424 430 aa12.05□□□□□ -0.48
BRF1-204ENST00000392557 CCT5P48643 541 aa12.05□□□□□ -0.48
BRF1-204ENST00000392557 USP14P54578 494 aa12.05□□□□□ -0.48
BRF1-204ENST00000392557 SHROOM1Q2M3G4 852 aaPredicted RBP12.05□□□□□ -0.48
BRF1-204ENST00000392557 KCTD1Q719H9 257 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms