RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 TRMT13Q9NUP7 481 aaKnown RBP19.36■□□□□ 0.69
PTPRK-208ENST00000392449 RAD50Q92878 1312 aa19.36■□□□□ 0.69
PTPRK-208ENST00000392449 DLL1O00548 723 aa19.35■□□□□ 0.69
PTPRK-208ENST00000392449 DNAJB2P25686 324 aa19.35■□□□□ 0.69
PTPRK-208ENST00000392449 PBX2P40425 430 aa19.35■□□□□ 0.69
PTPRK-208ENST00000392449 NT5C2P49902 561 aa19.35■□□□□ 0.69
PTPRK-208ENST00000392449 FBXO11Q86XK2 927 aa19.35■□□□□ 0.69
PTPRK-208ENST00000392449 NOC4LQ9BVI4 516 aaKnown RBP19.35■□□□□ 0.69
PTPRK-208ENST00000392449 WNT8AQ9H1J5 351 aa19.35■□□□□ 0.69
PTPRK-208ENST00000392449 ALDH8A1Q9H2A2 487 aaPredicted RBP19.35■□□□□ 0.69
PTPRK-208ENST00000392449 PPP1R11O60927 126 aaPredicted RBP19.35■□□□□ 0.69
PTPRK-208ENST00000392449 TXNP10599 105 aaKnown RBP19.35■□□□□ 0.69
PTPRK-208ENST00000392449 CYP2C9P11712 490 aa19.35■□□□□ 0.69
PTPRK-208ENST00000392449 SLC35G1Q2M3R5 365 aa19.35■□□□□ 0.69
PTPRK-208ENST00000392449 CHST3Q7LGC8 479 aa19.35■□□□□ 0.69
PTPRK-208ENST00000392449 RGS22Q8NE09 1264 aa19.35■□□□□ 0.69
PTPRK-208ENST00000392449 SCFD2Q8WU76 684 aa19.35■□□□□ 0.69
PTPRK-208ENST00000392449 CXXC1Q9P0U4 656 aaPredicted RBP19.35■□□□□ 0.69
PTPRK-208ENST00000392449 MAD2L2Q9UI95 211 aa19.35■□□□□ 0.69
PTPRK-208ENST00000392449 SCN10AQ9Y5Y9 1956 aa19.34■□□□□ 0.69
PTPRK-208ENST00000392449 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.34■□□□□ 0.69
PTPRK-208ENST00000392449 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.34■□□□□ 0.69
PTPRK-208ENST00000392449 OPLAHO14841 1288 aa19.34■□□□□ 0.69
PTPRK-208ENST00000392449 CPT1AP50416 773 aa19.34■□□□□ 0.69
PTPRK-208ENST00000392449 RASIP1Q5U651 963 aa19.34■□□□□ 0.69
PTPRK-208ENST00000392449 SEPT14Q6ZU15 432 aa19.34■□□□□ 0.69
PTPRK-208ENST00000392449 STOX1Q6ZVD7 989 aa19.34■□□□□ 0.69
PTPRK-208ENST00000392449 SCLYQ96I15 445 aa19.34■□□□□ 0.69
PTPRK-208ENST00000392449 IL23AQ9NPF7 189 aa19.34■□□□□ 0.69
PTPRK-208ENST00000392449 POLR3EQ9NVU0 708 aa19.34■□□□□ 0.69
PTPRK-208ENST00000392449 KIAA1217Q5T5P2 1943 aa19.33■□□□□ 0.69
PTPRK-208ENST00000392449 KLRF2D3W0D1 207 aa19.33■□□□□ 0.68
PTPRK-208ENST00000392449 RBAK-RBAKDNI3L0D1 243 aa19.33■□□□□ 0.68
PTPRK-208ENST00000392449 EIF2AK2P19525 551 aaKnown RBP19.33■□□□□ 0.68
PTPRK-208ENST00000392449 CHMP4BP1P59074 171 aa19.33■□□□□ 0.68
PTPRK-208ENST00000392449 LY6KQ17RY6 165 aa19.33■□□□□ 0.68
PTPRK-208ENST00000392449 NBPF20Q3BBV1 942 aa19.33■□□□□ 0.68
PTPRK-208ENST00000392449 FAM47CQ5HY64 1035 aa19.33■□□□□ 0.68
PTPRK-208ENST00000392449 VWCEQ96DN2 955 aa19.33■□□□□ 0.68
PTPRK-208ENST00000392449 RMDN3Q96TC7 470 aa19.33■□□□□ 0.68
PTPRK-208ENST00000392449 MPHOSPH6Q99547 160 aaKnown RBP19.33■□□□□ 0.68
PTPRK-208ENST00000392449 MTG1Q9BT17 334 aaPredicted RBP19.33■□□□□ 0.68
PTPRK-208ENST00000392449 GBF1Q92538 1859 aa19.33■□□□□ 0.68
PTPRK-208ENST00000392449 SCN5AQ14524 2016 aa19.33■□□□□ 0.68
PTPRK-208ENST00000392449 BAZ2BQ9UIF8 2168 aaKnown RBP19.33■□□□□ 0.68
PTPRK-208ENST00000392449 VCANP13611 3396 aa19.33■□□□□ 0.68
PTPRK-208ENST00000392449 CHD9Q3L8U1 2897 aa19.32■□□□□ 0.68
PTPRK-208ENST00000392449 SGSM2O43147 1006 aa19.32■□□□□ 0.68
PTPRK-208ENST00000392449 CFBP00751 764 aa19.32■□□□□ 0.68
PTPRK-208ENST00000392449 GRIN2CQ14957 1233 aa19.32■□□□□ 0.68
PTPRK-208ENST00000392449 PSRC1Q6PGN9 363 aaPredicted RBP19.32■□□□□ 0.68
PTPRK-208ENST00000392449 OTOP2Q7RTS6 562 aa19.32■□□□□ 0.68
PTPRK-208ENST00000392449 RUFY2Q8WXA3 655 aa19.32■□□□□ 0.68
PTPRK-208ENST00000392449 PBX4Q9BYU1 374 aa19.32■□□□□ 0.68
PTPRK-208ENST00000392449 GPHNQ9NQX3 736 aaPredicted RBP19.32■□□□□ 0.68
PTPRK-208ENST00000392449 MRPL11Q9Y3B7 192 aaKnown RBP19.32■□□□□ 0.68
PTPRK-208ENST00000392449 PALM3A6NDB9 673 aaPredicted RBP19.31■□□□□ 0.68
PTPRK-208ENST00000392449 A6NJR5 290 aa19.31■□□□□ 0.68
PTPRK-208ENST00000392449 E7EWF7 191 aa19.31■□□□□ 0.68
PTPRK-208ENST00000392449 IFIT3O14879 490 aaKnown RBP19.31■□□□□ 0.68
PTPRK-208ENST00000392449 NKRFO15226 690 aaKnown RBP eCLIP19.31■□□□□ 0.689e-11■□□□□ 11.3
PTPRK-208ENST00000392449 TRDNQ13061 729 aa19.31■□□□□ 0.68
PTPRK-208ENST00000392449 TTLL4Q14679 1199 aa19.31■□□□□ 0.68
PTPRK-208ENST00000392449 CCDC62Q6P9F0 684 aa19.31■□□□□ 0.68
PTPRK-208ENST00000392449 HOMER1Q86YM7 354 aa19.31■□□□□ 0.68
PTPRK-208ENST00000392449 MCF2L2Q86YR7 1114 aa19.31■□□□□ 0.68
PTPRK-208ENST00000392449 MAFAQ8NHW3 353 aaPredicted RBP19.31■□□□□ 0.68
PTPRK-208ENST00000392449 NSUN6Q8TEA1 469 aaKnown RBP19.31■□□□□ 0.68
PTPRK-208ENST00000392449 AFG1LQ8WV93 481 aa19.31■□□□□ 0.68
PTPRK-208ENST00000392449 TIFAQ96CG3 184 aa19.31■□□□□ 0.68
PTPRK-208ENST00000392449 U3KPZ7 1027 aaPredicted RBP19.31■□□□□ 0.68
PTPRK-208ENST00000392449 FOSL2P15408 326 aa19.3■□□□□ 0.68
PTPRK-208ENST00000392449 HOXA13P31271 388 aaPredicted RBP19.3■□□□□ 0.68
PTPRK-208ENST00000392449 ARHGEF16Q5VV41 709 aa19.3■□□□□ 0.68
PTPRK-208ENST00000392449 SKAP1Q86WV1 359 aa19.3■□□□□ 0.68
PTPRK-208ENST00000392449 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.3■□□□□ 0.68
PTPRK-208ENST00000392449 MTMR8Q96EF0 704 aa19.3■□□□□ 0.68
PTPRK-208ENST00000392449 AMNQ9BXJ7 453 aa19.3■□□□□ 0.68
PTPRK-208ENST00000392449 B4DLN1 442 aa19.29■□□□□ 0.68
PTPRK-208ENST00000392449 MRPL12P52815 198 aaKnown RBP19.29■□□□□ 0.68
PTPRK-208ENST00000392449 ANTXR2P58335 489 aa19.29■□□□□ 0.68
PTPRK-208ENST00000392449 ARHGAP1Q07960 439 aa19.29■□□□□ 0.68
PTPRK-208ENST00000392449 COL9A3Q14050 684 aaPredicted RBP19.29■□□□□ 0.68
PTPRK-208ENST00000392449 GRM4Q14833 912 aa19.29■□□□□ 0.68
PTPRK-208ENST00000392449 HERVK_113Q902F9 699 aa19.29■□□□□ 0.68
PTPRK-208ENST00000392449 ZFP91Q96JP5 570 aaPredicted RBP19.29■□□□□ 0.68
PTPRK-208ENST00000392449 PIGSQ96S52 555 aa19.29■□□□□ 0.68
PTPRK-208ENST00000392449 ZNF576Q9H609 170 aa19.29■□□□□ 0.68
PTPRK-208ENST00000392449 PXMP2Q9NR77 195 aa19.29■□□□□ 0.68
PTPRK-208ENST00000392449 ZBTB5O15062 677 aa19.28■□□□□ 0.68
PTPRK-208ENST00000392449 CYTH3O43739 400 aa19.28■□□□□ 0.68
PTPRK-208ENST00000392449 FGBP02675 491 aa19.28■□□□□ 0.68
PTPRK-208ENST00000392449 HSD17B4P51659 736 aa19.28■□□□□ 0.68
PTPRK-208ENST00000392449 STXBP2Q15833 593 aa19.28■□□□□ 0.68
PTPRK-208ENST00000392449 BRDTQ58F21 947 aaPredicted RBP19.28■□□□□ 0.68
PTPRK-208ENST00000392449 RALYLQ86SE5 291 aaKnown RBP19.28■□□□□ 0.68
PTPRK-208ENST00000392449 PIBF1Q8WXW3 757 aa19.28■□□□□ 0.68
PTPRK-208ENST00000392449 SEZ6LQ9BYH1 1024 aa19.28■□□□□ 0.68
PTPRK-208ENST00000392449 PCDHA1Q9Y5I3 950 aa19.28■□□□□ 0.68
PTPRK-208ENST00000392449 CHD7Q9P2D1 2997 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms