RNA–Protein interactions for RNA: ENST00000392334.6

CSNK1D-203, Transcript of casein kinase 1 delta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1D, Length 2,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-203ENST00000392334 CCDC194A0A1B0GVG4 234 aa22.36■■□□□ 1.17
CSNK1D-203ENST00000392334 ZBTB5O15062 677 aa22.36■■□□□ 1.17
CSNK1D-203ENST00000392334 ACTN4O43707 911 aaKnown RBP22.36■■□□□ 1.17
CSNK1D-203ENST00000392334 URI1O94763 535 aaPredicted RBP22.36■■□□□ 1.17
CSNK1D-203ENST00000392334 INPP5BP32019 993 aa22.36■■□□□ 1.17
CSNK1D-203ENST00000392334 FMR1Q06787 632 aaKnown RBP eCLIP22.36■■□□□ 1.17
CSNK1D-203ENST00000392334 TTC38Q5R3I4 469 aa22.36■■□□□ 1.17
CSNK1D-203ENST00000392334 NMRK2Q9NPI5 230 aa22.36■■□□□ 1.17
CSNK1D-203ENST00000392334 CLEC11AQ9Y240 323 aa22.36■■□□□ 1.17
CSNK1D-203ENST00000392334 TMX2Q9Y320 296 aa22.36■■□□□ 1.17
CSNK1D-203ENST00000392334 ATAD5Q96QE3 1844 aa22.36■■□□□ 1.17
CSNK1D-203ENST00000392334 POLR2DO15514 142 aaKnown RBP22.36■■□□□ 1.17
CSNK1D-203ENST00000392334 PNMA6AP0CW24 399 aaPredicted RBP22.36■■□□□ 1.17
CSNK1D-203ENST00000392334 MCM7P33993 719 aa22.36■■□□□ 1.17
CSNK1D-203ENST00000392334 INF2Q27J81 1249 aa22.36■■□□□ 1.17
CSNK1D-203ENST00000392334 CCDC12Q8WUD4 166 aaPredicted RBP22.36■■□□□ 1.17
CSNK1D-203ENST00000392334 GMCL1Q96IK5 515 aa22.36■■□□□ 1.17
CSNK1D-203ENST00000392334 C6orf50Q9HD87 102 aa22.36■■□□□ 1.17
CSNK1D-203ENST00000392334 TMEM260Q9NX78 707 aa22.36■■□□□ 1.17
CSNK1D-203ENST00000392334 ASNSP08243 561 aa22.35■■□□□ 1.17
CSNK1D-203ENST00000392334 PRR29P0C7W0 189 aa22.35■■□□□ 1.17
CSNK1D-203ENST00000392334 TAL1P17542 331 aaPredicted RBP22.35■■□□□ 1.17
CSNK1D-203ENST00000392334 DGKZQ13574 1117 aa22.35■■□□□ 1.17
CSNK1D-203ENST00000392334 QRICH1Q2TAL8 776 aa22.35■■□□□ 1.17
CSNK1D-203ENST00000392334 FAM83BQ5T0W9 1011 aa22.35■■□□□ 1.17
CSNK1D-203ENST00000392334 JAKMIP3Q5VZ66 844 aa22.35■■□□□ 1.17
CSNK1D-203ENST00000392334 MAP3K9P80192 1104 aa22.35■■□□□ 1.17
CSNK1D-203ENST00000392334 GOLGA8FQ08AF8 430 aa22.35■■□□□ 1.17
CSNK1D-203ENST00000392334 GOLGA8DPQ0D2H9 430 aa22.35■■□□□ 1.17
CSNK1D-203ENST00000392334 CDC37Q16543 378 aaPredicted RBP22.35■■□□□ 1.17
CSNK1D-203ENST00000392334 MAP1SQ66K74 1059 aaPredicted RBP22.35■■□□□ 1.17
CSNK1D-203ENST00000392334 ZKSCAN4Q969J2 545 aaPredicted RBP22.35■■□□□ 1.17
CSNK1D-203ENST00000392334 ZNF341Q9BYN7 854 aa22.35■■□□□ 1.17
CSNK1D-203ENST00000392334 GNA11P29992 359 aa22.34■■□□□ 1.17
CSNK1D-203ENST00000392334 NR1I3Q14994 352 aa22.34■■□□□ 1.17
CSNK1D-203ENST00000392334 SUPT20HL1Q3ZLR7 823 aa22.34■■□□□ 1.17
CSNK1D-203ENST00000392334 TMCO3Q6UWJ1 677 aa22.34■■□□□ 1.17
CSNK1D-203ENST00000392334 DAGLBQ8NCG7 672 aa22.34■■□□□ 1.17
CSNK1D-203ENST00000392334 WRNIP1Q96S55 665 aa22.34■■□□□ 1.17
CSNK1D-203ENST00000392334 CARD6Q9BX69 1037 aa22.34■■□□□ 1.17
CSNK1D-203ENST00000392334 GOPCQ9HD26 462 aa22.34■■□□□ 1.17
CSNK1D-203ENST00000392334 A0A1B0GTH6 734 aa22.33■■□□□ 1.17
CSNK1D-203ENST00000392334 CDK11BP21127 795 aaKnown RBP22.33■■□□□ 1.17
CSNK1D-203ENST00000392334 CASQ1P31415 396 aa22.33■■□□□ 1.17
CSNK1D-203ENST00000392334 DCAF15Q66K64 600 aa22.33■■□□□ 1.17
CSNK1D-203ENST00000392334 GALNT17Q6IS24 598 aa22.33■■□□□ 1.17
CSNK1D-203ENST00000392334 PTGDRQ13258 359 aa22.33■■□□□ 1.16
CSNK1D-203ENST00000392334 UBE2SQ16763 222 aa22.33■■□□□ 1.16
CSNK1D-203ENST00000392334 MTMR8Q96EF0 704 aa22.33■■□□□ 1.16
CSNK1D-203ENST00000392334 MED15Q96RN5 788 aa22.33■■□□□ 1.16
CSNK1D-203ENST00000392334 USH1GQ495M9 461 aa22.32■■□□□ 1.16
CSNK1D-203ENST00000392334 SYDE2Q5VT97 1194 aa22.32■■□□□ 1.16
CSNK1D-203ENST00000392334 KLRG1Q96E93 195 aa22.32■■□□□ 1.16
CSNK1D-203ENST00000392334 CDCA5Q96FF9 252 aa22.32■■□□□ 1.16
CSNK1D-203ENST00000392334 CCDC34Q96HJ3 373 aa22.32■■□□□ 1.16
CSNK1D-203ENST00000392334 VCPKMTQ9H867 229 aa22.32■■□□□ 1.16
CSNK1D-203ENST00000392334 PCDHA1Q9Y5I3 950 aa22.32■■□□□ 1.16
CSNK1D-203ENST00000392334 MRFAP1Q9Y605 127 aa22.32■■□□□ 1.16
CSNK1D-203ENST00000392334 PLA2G4AP47712 749 aa22.31■■□□□ 1.16
CSNK1D-203ENST00000392334 ADCY7P51828 1080 aa22.31■■□□□ 1.16
CSNK1D-203ENST00000392334 REXO1Q8N1G1 1221 aaKnown RBP22.31■■□□□ 1.16
CSNK1D-203ENST00000392334 GPR161Q8N6U8 529 aaKnown RBP22.31■■□□□ 1.16
CSNK1D-203ENST00000392334 KIFC2Q96AC6 838 aa22.31■■□□□ 1.16
CSNK1D-203ENST00000392334 PANX2Q96RD6 677 aa22.31■■□□□ 1.16
CSNK1D-203ENST00000392334 CSRNP2Q9H175 543 aa22.31■■□□□ 1.16
CSNK1D-203ENST00000392334 CTNND1O60716 968 aaKnown RBP22.31■■□□□ 1.16
CSNK1D-203ENST00000392334 USP2O75604 605 aaPredicted RBP22.31■■□□□ 1.16
CSNK1D-203ENST00000392334 USP49Q70CQ1 688 aa22.31■■□□□ 1.16
CSNK1D-203ENST00000392334 PDILTQ8N807 584 aa22.31■■□□□ 1.16
CSNK1D-203ENST00000392334 HOOK2Q96ED9 719 aa22.31■■□□□ 1.16
CSNK1D-203ENST00000392334 ZNF112Q9UJU3 913 aa22.31■■□□□ 1.16
CSNK1D-203ENST00000392334 TRAF5O00463 557 aa22.3■■□□□ 1.16
CSNK1D-203ENST00000392334 STAT2P52630 851 aa22.3■■□□□ 1.16
CSNK1D-203ENST00000392334 GNG11P61952 73 aa22.3■■□□□ 1.16
CSNK1D-203ENST00000392334 TOGARAM2Q6ZUX3 1019 aa22.3■■□□□ 1.16
CSNK1D-203ENST00000392334 RSRC2Q7L4I2 434 aaKnown RBP22.3■■□□□ 1.16
CSNK1D-203ENST00000392334 SH3RF1Q7Z6J0 888 aa22.3■■□□□ 1.16
CSNK1D-203ENST00000392334 PRR12Q9ULL5 1215 aa22.3■■□□□ 1.16
CSNK1D-203ENST00000392334 hCG_1984214I3L0E3 225 aa22.3■■□□□ 1.16
CSNK1D-203ENST00000392334 PTPN21Q16825 1174 aa22.3■■□□□ 1.16
CSNK1D-203ENST00000392334 LETM2Q2VYF4 491 aa22.3■■□□□ 1.16
CSNK1D-203ENST00000392334 MOB2Q70IA6 237 aa22.3■■□□□ 1.16
CSNK1D-203ENST00000392334 ZNF713Q8N859 430 aaPredicted RBP22.3■■□□□ 1.16
CSNK1D-203ENST00000392334 WDR24Q96S15 920 aa22.3■■□□□ 1.16
CSNK1D-203ENST00000392334 NAA15Q9BXJ9 866 aaKnown RBP22.3■■□□□ 1.16
CSNK1D-203ENST00000392334 FBXO28Q9NVF7 368 aa22.3■■□□□ 1.16
CSNK1D-203ENST00000392334 TRAPPC10P48553 1259 aa22.29■■□□□ 1.16
CSNK1D-203ENST00000392334 ADKP55263 362 aaKnown RBP22.29■■□□□ 1.16
CSNK1D-203ENST00000392334 SPATA1Q5VX52 437 aa22.29■■□□□ 1.16
CSNK1D-203ENST00000392334 APTXQ7Z2E3 356 aaKnown RBP22.29■■□□□ 1.16
CSNK1D-203ENST00000392334 TRMT44Q8IYL2 757 aaKnown RBP22.29■■□□□ 1.16
CSNK1D-203ENST00000392334 TBCKQ8TEA7 893 aa22.29■■□□□ 1.16
CSNK1D-203ENST00000392334 UBXN6Q9BZV1 441 aa22.29■■□□□ 1.16
CSNK1D-203ENST00000392334 PSTPIP2Q9H939 334 aa22.29■■□□□ 1.16
CSNK1D-203ENST00000392334 SAMSN1Q9NSI8 373 aaKnown RBP22.29■■□□□ 1.16
CSNK1D-203ENST00000392334 CCDC66A2RUB6 948 aa22.28■■□□□ 1.16
CSNK1D-203ENST00000392334 AKR1B15C9JRZ8 316 aaPredicted RBP22.28■■□□□ 1.16
CSNK1D-203ENST00000392334 BMP15O95972 392 aa22.28■■□□□ 1.16
CSNK1D-203ENST00000392334 PPP2R3AQ06190 1150 aa22.28■■□□□ 1.16
CSNK1D-203ENST00000392334 NONOQ15233 471 aaKnown RBP eCLIP22.28■■□□□ 1.161e-6■■■■□ 21.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms