RNA–Protein interactions for RNA: ENST00000388996.9

KCNQ3-201, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KCNQ3, Length 11,510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-201ENST00000388996 THRAP3Q9Y2W1 955 aaKnown RBP13.43□□□□□ -0.26
KCNQ3-201ENST00000388996 USP6P35125 1406 aa13.43□□□□□ -0.26
KCNQ3-201ENST00000388996 SPDYE16A6NNV3 312 aaPredicted RBP13.43□□□□□ -0.26
KCNQ3-201ENST00000388996 HADHQ16836 314 aaKnown RBP13.43□□□□□ -0.26
KCNQ3-201ENST00000388996 SPDYE2Q495Y8 402 aa13.43□□□□□ -0.26
KCNQ3-201ENST00000388996 ANKRD42Q8N9B4 389 aa13.43□□□□□ -0.26
KCNQ3-201ENST00000388996 PPP2R2CQ9Y2T4 447 aa13.43□□□□□ -0.26
KCNQ3-201ENST00000388996 CITO14578 2027 aa13.43□□□□□ -0.26
KCNQ3-201ENST00000388996 TLR3O15455 904 aaKnown RBP13.42□□□□□ -0.26
KCNQ3-201ENST00000388996 CCND2P30279 289 aa13.42□□□□□ -0.26
KCNQ3-201ENST00000388996 PTPROQ16827 1216 aa13.42□□□□□ -0.26
KCNQ3-201ENST00000388996 EXOC3L4Q17RC7 722 aa13.42□□□□□ -0.26
KCNQ3-201ENST00000388996 TMEM94Q12767 1356 aa13.42□□□□□ -0.26
KCNQ3-201ENST00000388996 DOK7Q18PE1 504 aa13.42□□□□□ -0.26
KCNQ3-201ENST00000388996 TRIM11Q96F44 468 aa13.42□□□□□ -0.26
KCNQ3-201ENST00000388996 FAM26FQ5R3K3 315 aa13.42□□□□□ -0.26
KCNQ3-201ENST00000388996 ARMCX5Q6P1M9 558 aa13.42□□□□□ -0.26
KCNQ3-201ENST00000388996 RUNDC3BQ96NL0 473 aa13.42□□□□□ -0.26
KCNQ3-201ENST00000388996 FAM114A2Q9NRY5 505 aa13.42□□□□□ -0.26
KCNQ3-201ENST00000388996 CAMSAP1Q5T5Y3 1602 aa13.42□□□□□ -0.26
KCNQ3-201ENST00000388996 UBE3CQ15386 1083 aa13.42□□□□□ -0.26
KCNQ3-201ENST00000388996 PPP1R12CQ9BZL4 782 aa13.42□□□□□ -0.26
KCNQ3-201ENST00000388996 PALD1Q9ULE6 856 aa13.42□□□□□ -0.26
KCNQ3-201ENST00000388996 LTKP29376 864 aa13.42□□□□□ -0.26
KCNQ3-201ENST00000388996 SCYL2Q6P3W7 929 aa13.42□□□□□ -0.26
KCNQ3-201ENST00000388996 USP28Q96RU2 1077 aa13.42□□□□□ -0.26
KCNQ3-201ENST00000388996 KLHL14Q9P2G3 628 aa13.42□□□□□ -0.26
KCNQ3-201ENST00000388996 NXNQ6DKJ4 435 aa13.42□□□□□ -0.26
KCNQ3-201ENST00000388996 SLC7A3Q8WY07 619 aa13.42□□□□□ -0.26
KCNQ3-201ENST00000388996 MED4Q9NPJ6 270 aa13.42□□□□□ -0.26
KCNQ3-201ENST00000388996 AKT3Q9Y243 479 aa13.42□□□□□ -0.26
KCNQ3-201ENST00000388996 STAT2P52630 851 aa13.42□□□□□ -0.26
KCNQ3-201ENST00000388996 SCRN1Q12765 414 aa13.42□□□□□ -0.26
KCNQ3-201ENST00000388996 RBBP5Q15291 538 aaKnown RBP13.42□□□□□ -0.26
KCNQ3-201ENST00000388996 RSRC2Q7L4I2 434 aaKnown RBP13.42□□□□□ -0.26
KCNQ3-201ENST00000388996 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.42□□□□□ -0.26
KCNQ3-201ENST00000388996 ABCC3O15438 1527 aa13.42□□□□□ -0.26
KCNQ3-201ENST00000388996 USP14P54578 494 aa13.42□□□□□ -0.26
KCNQ3-201ENST00000388996 SNX25Q9H3E2 840 aa13.42□□□□□ -0.26
KCNQ3-201ENST00000388996 ARHGAP42A6NI28 874 aa13.42□□□□□ -0.26
KCNQ3-201ENST00000388996 IFRD2Q12894 506 aaPredicted RBP13.42□□□□□ -0.26
KCNQ3-201ENST00000388996 MYH7P12883 1935 aa13.42□□□□□ -0.26
KCNQ3-201ENST00000388996 GSPT1P15170 499 aaKnown RBP13.41□□□□□ -0.26
KCNQ3-201ENST00000388996 ADD1P35611 737 aaKnown RBP13.41□□□□□ -0.26
KCNQ3-201ENST00000388996 IGBP1P78318 339 aa13.41□□□□□ -0.26
KCNQ3-201ENST00000388996 ZNF827Q17R98 1081 aa13.41□□□□□ -0.26
KCNQ3-201ENST00000388996 EEF1GP26641 437 aaKnown RBP13.41□□□□□ -0.26
KCNQ3-201ENST00000388996 ADAT2Q7Z6V5 191 aaKnown RBP13.41□□□□□ -0.26
KCNQ3-201ENST00000388996 TRPC5Q9UL62 973 aaPredicted RBP13.41□□□□□ -0.26
KCNQ3-201ENST00000388996 PDE8BO95263 885 aa13.41□□□□□ -0.26
KCNQ3-201ENST00000388996 NDUFA8P51970 172 aa13.41□□□□□ -0.26
KCNQ3-201ENST00000388996 RTEL1Q9NZ71 1219 aa13.41□□□□□ -0.26
KCNQ3-201ENST00000388996 BFSP1Q12934 665 aa13.41□□□□□ -0.26
KCNQ3-201ENST00000388996 RETREG2Q8NC44 543 aa13.41□□□□□ -0.26
KCNQ3-201ENST00000388996 FOXP1Q9H334 677 aaPredicted RBP13.41□□□□□ -0.26
KCNQ3-201ENST00000388996 hCG_1984214I3L0E3 225 aa13.41□□□□□ -0.26
KCNQ3-201ENST00000388996 ZNF713Q8N859 430 aaPredicted RBP13.41□□□□□ -0.26
KCNQ3-201ENST00000388996 USH1CQ9Y6N9 552 aa13.41□□□□□ -0.26
KCNQ3-201ENST00000388996 ARHGAP4P98171 946 aa13.41□□□□□ -0.26
KCNQ3-201ENST00000388996 SPATA1Q5VX52 437 aa13.41□□□□□ -0.26
KCNQ3-201ENST00000388996 DHTKD1Q96HY7 919 aaPredicted RBP13.41□□□□□ -0.26
KCNQ3-201ENST00000388996 LEMD3Q9Y2U8 911 aa13.41□□□□□ -0.26
KCNQ3-201ENST00000388996 RNF17Q9BXT8 1623 aaKnown RBP13.41□□□□□ -0.26
KCNQ3-201ENST00000388996 CABS1Q96KC9 395 aa13.41□□□□□ -0.26
KCNQ3-201ENST00000388996 MFAP3P55082 362 aa13.41□□□□□ -0.26
KCNQ3-201ENST00000388996 RSPH3Q86UC2 560 aa13.41□□□□□ -0.26
KCNQ3-201ENST00000388996 FBXO18Q8NFZ0 1043 aa13.41□□□□□ -0.26
KCNQ3-201ENST00000388996 KANSL2Q9H9L4 492 aa13.41□□□□□ -0.26
KCNQ3-201ENST00000388996 PCDHA4Q9UN74 947 aa13.41□□□□□ -0.26
KCNQ3-201ENST00000388996 KRT3P12035 628 aa13.4□□□□□ -0.26
KCNQ3-201ENST00000388996 RBM6P78332 1123 aaKnown RBP13.4□□□□□ -0.26
KCNQ3-201ENST00000388996 EHHADHQ08426 723 aa13.4□□□□□ -0.26
KCNQ3-201ENST00000388996 ZMYM1Q5SVZ6 1142 aa13.4□□□□□ -0.26
KCNQ3-201ENST00000388996 C4orf50Q6ZRC1 276 aa13.4□□□□□ -0.26
KCNQ3-201ENST00000388996 DTNBO60941 627 aa13.4□□□□□ -0.26
KCNQ3-201ENST00000388996 LARP4BQ92615 738 aaKnown RBP13.4□□□□□ -0.26
KCNQ3-201ENST00000388996 FANCLQ9NW38 375 aa13.4□□□□□ -0.26
KCNQ3-201ENST00000388996 MIS18BP1Q6P0N0 1132 aa13.4□□□□□ -0.26
KCNQ3-201ENST00000388996 RNF10Q8N5U6 811 aaKnown RBP13.4□□□□□ -0.26
KCNQ3-201ENST00000388996 TMEM63CQ9P1W3 806 aa13.4□□□□□ -0.26
KCNQ3-201ENST00000388996 CPSF2Q9P2I0 782 aaKnown RBP13.4□□□□□ -0.26
KCNQ3-201ENST00000388996 PRPSAP1Q14558 356 aa13.4□□□□□ -0.26
KCNQ3-201ENST00000388996 MRFAP1L1Q96HT8 127 aa13.4□□□□□ -0.26
KCNQ3-201ENST00000388996 LSG1Q9H089 658 aaKnown RBP13.4□□□□□ -0.26
KCNQ3-201ENST00000388996 UNC13BO14795 1591 aa13.4□□□□□ -0.26
KCNQ3-201ENST00000388996 H2AFZP0C0S5 128 aa13.4□□□□□ -0.26
KCNQ3-201ENST00000388996 PROSER3Q2NL68 480 aa13.4□□□□□ -0.26
KCNQ3-201ENST00000388996 H2AFVQ71UI9 128 aa13.4□□□□□ -0.26
KCNQ3-201ENST00000388996 ANKRD36BP1Q96IX9 119 aa13.4□□□□□ -0.26
KCNQ3-201ENST00000388996 CLIC6Q96NY7 704 aa13.4□□□□□ -0.26
KCNQ3-201ENST00000388996 NT5C1BQ96P26 610 aa13.4□□□□□ -0.26
KCNQ3-201ENST00000388996 KIF9Q9HAQ2 790 aa13.4□□□□□ -0.26
KCNQ3-201ENST00000388996 POLR3EQ9NVU0 708 aa13.4□□□□□ -0.26
KCNQ3-201ENST00000388996 MAGI2Q86UL8 1455 aa13.4□□□□□ -0.26
KCNQ3-201ENST00000388996 TXNDC9O14530 226 aa13.4□□□□□ -0.26
KCNQ3-201ENST00000388996 GDF11O95390 407 aa13.4□□□□□ -0.26
KCNQ3-201ENST00000388996 NR2F2P24468 414 aa13.4□□□□□ -0.26
KCNQ3-201ENST00000388996 ABCD1P33897 745 aa13.4□□□□□ -0.26
KCNQ3-201ENST00000388996 CACTINQ8WUQ7 758 aaKnown RBP13.4□□□□□ -0.26
KCNQ3-201ENST00000388996 COPB1P53618 953 aaKnown RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms