RNA–Protein interactions for RNA: ENST00000384344.1

RNU6-39P-201, Transcript of RNA, U6 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU6-39P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-39P-201ENST00000384344 PAQR3Q6TCH7 311 aa4.92□□□□□ -1.62
RNU6-39P-201ENST00000384344 MAMDC2Q7Z304 686 aaPredicted RBP4.92□□□□□ -1.62
RNU6-39P-201ENST00000384344 ZNF605Q86T29 641 aa4.92□□□□□ -1.62
RNU6-39P-201ENST00000384344 FBXO15Q8NCQ5 510 aaPredicted RBP4.92□□□□□ -1.62
RNU6-39P-201ENST00000384344 TRMT2BQ96GJ1 504 aaKnown RBP4.92□□□□□ -1.62
RNU6-39P-201ENST00000384344 C1orf159Q96HA4 380 aa4.92□□□□□ -1.62
RNU6-39P-201ENST00000384344 ALG1Q9BT22 464 aa4.92□□□□□ -1.62
RNU6-39P-201ENST00000384344 PHF20Q9BVI0 1012 aa4.92□□□□□ -1.62
RNU6-39P-201ENST00000384344 AP5M1Q9H0R1 490 aa4.92□□□□□ -1.62
RNU6-39P-201ENST00000384344 TNFRSF12AQ9NP84 129 aa4.92□□□□□ -1.62
RNU6-39P-201ENST00000384344 C22orf46C9J442 243 aa4.91□□□□□ -1.62
RNU6-39P-201ENST00000384344 PEX10O60683 326 aa4.91□□□□□ -1.62
RNU6-39P-201ENST00000384344 CEBPAP49715 358 aaPredicted RBP4.91□□□□□ -1.62
RNU6-39P-201ENST00000384344 GPR85P60893 370 aa4.91□□□□□ -1.62
RNU6-39P-201ENST00000384344 GABREP78334 506 aa4.91□□□□□ -1.62
RNU6-39P-201ENST00000384344 CHRNA2Q15822 529 aa4.91□□□□□ -1.62
RNU6-39P-201ENST00000384344 INF2Q27J81 1249 aa4.91□□□□□ -1.62
RNU6-39P-201ENST00000384344 KIZQ2M2Z5 673 aa4.91□□□□□ -1.62
RNU6-39P-201ENST00000384344 MROH9Q5TGP6 573 aa4.91□□□□□ -1.62
RNU6-39P-201ENST00000384344 STYK1Q6J9G0 422 aa4.91□□□□□ -1.62
RNU6-39P-201ENST00000384344 PRR23BQ6ZRT6 265 aa4.91□□□□□ -1.62
RNU6-39P-201ENST00000384344 CEP68Q76N32 757 aa4.91□□□□□ -1.62
RNU6-39P-201ENST00000384344 DCP2Q8IU60 420 aaKnown RBP4.91□□□□□ -1.62
RNU6-39P-201ENST00000384344 CCDC103Q8IW40 242 aa4.91□□□□□ -1.62
RNU6-39P-201ENST00000384344 IFNL3Q8IZI9 196 aa4.91□□□□□ -1.62
RNU6-39P-201ENST00000384344 NETO2Q8NC67 525 aa4.91□□□□□ -1.62
RNU6-39P-201ENST00000384344 PTPRN2Q92932 1015 aa4.91□□□□□ -1.62
RNU6-39P-201ENST00000384344 PEX11GQ96HA9 241 aa4.91□□□□□ -1.62
RNU6-39P-201ENST00000384344 PPP1R16BQ96T49 567 aa4.91□□□□□ -1.62
RNU6-39P-201ENST00000384344 ZNF552Q9H707 407 aaPredicted RBP4.91□□□□□ -1.62
RNU6-39P-201ENST00000384344 SIRT5Q9NXA8 310 aa4.91□□□□□ -1.62
RNU6-39P-201ENST00000384344 MRPS23Q9Y3D9 190 aaKnown RBP4.91□□□□□ -1.62
RNU6-39P-201ENST00000384344 NPFFR2Q9Y5X5 522 aa4.91□□□□□ -1.62
RNU6-39P-201ENST00000384344 PTCH2Q9Y6C5 1203 aa4.91□□□□□ -1.62
RNU6-39P-201ENST00000384344 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.91□□□□□ -1.62
RNU6-39P-201ENST00000384344 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.9□□□□□ -1.63
RNU6-39P-201ENST00000384344 H7BY64 318 aa4.9□□□□□ -1.63
RNU6-39P-201ENST00000384344 EFCAB14O75071 495 aa4.9□□□□□ -1.63
RNU6-39P-201ENST00000384344 SEMA7AO75326 666 aa4.9□□□□□ -1.63
RNU6-39P-201ENST00000384344 DGKIO75912 1065 aa4.9□□□□□ -1.63
RNU6-39P-201ENST00000384344 MSL3P1P0C860 447 aa4.9□□□□□ -1.63
RNU6-39P-201ENST00000384344 BCL6P41182 706 aa4.9□□□□□ -1.63
RNU6-39P-201ENST00000384344 MAPKAPK2P49137 400 aa4.9□□□□□ -1.63
RNU6-39P-201ENST00000384344 CYP4F3Q08477 520 aa4.9□□□□□ -1.63
RNU6-39P-201ENST00000384344 KIR3DS1Q14943 382 aa4.9□□□□□ -1.63
RNU6-39P-201ENST00000384344 TAF7LQ5H9L4 462 aa4.9□□□□□ -1.63
RNU6-39P-201ENST00000384344 FAM209AQ5JX71 171 aa4.9□□□□□ -1.63
RNU6-39P-201ENST00000384344 MBLAC2Q68D91 279 aa4.9□□□□□ -1.63
RNU6-39P-201ENST00000384344 WWC2Q6AWC2 1192 aa4.9□□□□□ -1.63
RNU6-39P-201ENST00000384344 ZC3H14Q6PJT7 736 aaKnown RBP4.9□□□□□ -1.63
RNU6-39P-201ENST00000384344 MTDHQ86UE4 582 aaKnown RBP4.9□□□□□ -1.63
RNU6-39P-201ENST00000384344 HOMER1Q86YM7 354 aa4.9□□□□□ -1.63
RNU6-39P-201ENST00000384344 TEX2Q8IWB9 1127 aa4.9□□□□□ -1.63
RNU6-39P-201ENST00000384344 JMYQ8N9B5 988 aa4.9□□□□□ -1.63
RNU6-39P-201ENST00000384344 RCBTB1Q8NDN9 531 aa4.9□□□□□ -1.63
RNU6-39P-201ENST00000384344 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.9□□□□□ -1.63
RNU6-39P-201ENST00000384344 SH3TC2Q8TF17 1288 aa4.9□□□□□ -1.63
RNU6-39P-201ENST00000384344 FAM84AQ96KN4 292 aa4.9□□□□□ -1.63
RNU6-39P-201ENST00000384344 PIF1Q9H611 641 aa4.9□□□□□ -1.63
RNU6-39P-201ENST00000384344 CLDND1Q9NY35 253 aa4.9□□□□□ -1.63
RNU6-39P-201ENST00000384344 TMEFF2Q9UIK5 374 aaPredicted RBP4.9□□□□□ -1.63
RNU6-39P-201ENST00000384344 BLACEA4D250 179 aa4.89□□□□□ -1.63
RNU6-39P-201ENST00000384344 F8W031 263 aaPredicted RBP4.89□□□□□ -1.63
RNU6-39P-201ENST00000384344 MAFKO60675 156 aa4.89□□□□□ -1.63
RNU6-39P-201ENST00000384344 ZBTB7AO95365 584 aa4.89□□□□□ -1.63
RNU6-39P-201ENST00000384344 DBHP09172 617 aa4.89□□□□□ -1.63
RNU6-39P-201ENST00000384344 GLI4P10075 376 aa4.89□□□□□ -1.63
RNU6-39P-201ENST00000384344 SDHBP21912 280 aa4.89□□□□□ -1.63
RNU6-39P-201ENST00000384344 YBX1P67809 324 aaKnown RBP4.89□□□□□ -1.63
RNU6-39P-201ENST00000384344 SRSF3P84103 164 aaKnown RBP4.89□□□□□ -1.63
RNU6-39P-201ENST00000384344 CBX2Q14781 532 aaPredicted RBP4.89□□□□□ -1.63
RNU6-39P-201ENST00000384344 SLC9A5Q14940 896 aa4.89□□□□□ -1.63
RNU6-39P-201ENST00000384344 DENND5AQ6IQ26 1287 aa4.89□□□□□ -1.63
RNU6-39P-201ENST00000384344 TMC6Q7Z403 805 aa4.89□□□□□ -1.63
RNU6-39P-201ENST00000384344 RIOX2Q8IUF8 465 aa4.89□□□□□ -1.63
RNU6-39P-201ENST00000384344 SYNPOQ8N3V7 929 aa4.89□□□□□ -1.63
RNU6-39P-201ENST00000384344 LILRB2Q8N423 598 aa4.89□□□□□ -1.63
RNU6-39P-201ENST00000384344 PANK1Q8TE04 598 aa4.89□□□□□ -1.63
RNU6-39P-201ENST00000384344 EXOC2Q96KP1 924 aa4.89□□□□□ -1.63
RNU6-39P-201ENST00000384344 MTA3Q9BTC8 594 aa4.89□□□□□ -1.63
RNU6-39P-201ENST00000384344 MRPL4Q9BYD3 311 aaKnown RBP4.89□□□□□ -1.63
RNU6-39P-201ENST00000384344 EPB41L1Q9H4G0 881 aa4.89□□□□□ -1.63
RNU6-39P-201ENST00000384344 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.89□□□□□ -1.63
RNU6-39P-201ENST00000384344 SFMBT1Q9UHJ3 866 aa4.89□□□□□ -1.63
RNU6-39P-201ENST00000384344 TMA7Q9Y2S6 64 aaKnown RBP4.89□□□□□ -1.63
RNU6-39P-201ENST00000384344 NUB1Q9Y5A7 615 aa4.89□□□□□ -1.63
RNU6-39P-201ENST00000384344 FAM47E-STBD1D6RA91 191 aa4.88□□□□□ -1.63
RNU6-39P-201ENST00000384344 KRIT1O00522 736 aa4.88□□□□□ -1.63
RNU6-39P-201ENST00000384344 NFIBO00712 420 aa4.88□□□□□ -1.63
RNU6-39P-201ENST00000384344 EFEMP2O95967 443 aa4.88□□□□□ -1.63
RNU6-39P-201ENST00000384344 TMEM253P0C7T8 217 aa4.88□□□□□ -1.63
RNU6-39P-201ENST00000384344 LCP1P13796 627 aa4.88□□□□□ -1.63
RNU6-39P-201ENST00000384344 GRK2P25098 689 aa4.88□□□□□ -1.63
RNU6-39P-201ENST00000384344 GRK3P35626 688 aa4.88□□□□□ -1.63
RNU6-39P-201ENST00000384344 GUCY1A3Q02108 690 aa4.88□□□□□ -1.63
RNU6-39P-201ENST00000384344 PAK1Q13153 545 aa4.88□□□□□ -1.63
RNU6-39P-201ENST00000384344 NTRK3Q16288 839 aa4.88□□□□□ -1.63
RNU6-39P-201ENST00000384344 PLEKHN1Q494U1 663 aaPredicted RBP4.88□□□□□ -1.63
RNU6-39P-201ENST00000384344 FOXB2Q5VYV0 432 aa4.88□□□□□ -1.63
RNU6-39P-201ENST00000384344 RPTNQ6XPR3 784 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms