RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 CWF19L2Q2TBE0 894 aaKnown RBP16.52■□□□□ 0.24
VLDLR-202ENST00000382099 CCDC42Q96M95 316 aa16.52■□□□□ 0.24
VLDLR-202ENST00000382099 CCDC113Q9H0I3 377 aa16.52■□□□□ 0.24
VLDLR-202ENST00000382099 TLDC2A0PJX2 215 aa16.52■□□□□ 0.23
VLDLR-202ENST00000382099 SRRM3A6NNA2 597 aaPredicted RBP16.52■□□□□ 0.23
VLDLR-202ENST00000382099 PRC1O43663 620 aa16.52■□□□□ 0.23
VLDLR-202ENST00000382099 ORC4O43929 436 aa16.52■□□□□ 0.23
VLDLR-202ENST00000382099 CDKAL1Q5VV42 579 aa16.52■□□□□ 0.23
VLDLR-202ENST00000382099 SDCCAG8Q86SQ7 713 aaPredicted RBP16.52■□□□□ 0.23
VLDLR-202ENST00000382099 CHPF2Q9P2E5 772 aa16.52■□□□□ 0.23
VLDLR-202ENST00000382099 GALNT17Q6IS24 598 aa16.51■□□□□ 0.23
VLDLR-202ENST00000382099 CCDC155Q8N6L0 562 aa16.51■□□□□ 0.23
VLDLR-202ENST00000382099 C5orf60A6NFR6 353 aa16.51■□□□□ 0.23
VLDLR-202ENST00000382099 BUB1O43683 1085 aa16.51■□□□□ 0.23
VLDLR-202ENST00000382099 GSTA1P08263 222 aa16.51■□□□□ 0.23
VLDLR-202ENST00000382099 DESP17661 470 aa16.51■□□□□ 0.23
VLDLR-202ENST00000382099 FECHP22830 423 aa16.51■□□□□ 0.23
VLDLR-202ENST00000382099 HSD17B3P37058 310 aa16.51■□□□□ 0.23
VLDLR-202ENST00000382099 SARSP49591 514 aaKnown RBP16.51■□□□□ 0.23
VLDLR-202ENST00000382099 CFAP221Q4G0U5 840 aa16.51■□□□□ 0.23
VLDLR-202ENST00000382099 RASIP1Q5U651 963 aa16.51■□□□□ 0.23
VLDLR-202ENST00000382099 CD302Q8IX05 232 aa16.51■□□□□ 0.23
VLDLR-202ENST00000382099 OPTNQ96CV9 577 aa16.51■□□□□ 0.23
VLDLR-202ENST00000382099 XPO6Q96QU8 1125 aaKnown RBP16.51■□□□□ 0.23
VLDLR-202ENST00000382099 SLC12A4Q9UP95 1085 aa16.51■□□□□ 0.23
VLDLR-202ENST00000382099 MSH2P43246 934 aa16.51■□□□□ 0.23
VLDLR-202ENST00000382099 GNAQP50148 359 aa16.51■□□□□ 0.23
VLDLR-202ENST00000382099 SESN3P58005 492 aa16.51■□□□□ 0.23
VLDLR-202ENST00000382099 MPP3Q13368 585 aa16.51■□□□□ 0.23
VLDLR-202ENST00000382099 KANK3Q6NY19 840 aa16.51■□□□□ 0.23
VLDLR-202ENST00000382099 RALYLQ86SE5 291 aaKnown RBP16.51■□□□□ 0.23
VLDLR-202ENST00000382099 KIFAP3Q92845 792 aa16.51■□□□□ 0.23
VLDLR-202ENST00000382099 DTNBP1Q96EV8 351 aa16.51■□□□□ 0.23
VLDLR-202ENST00000382099 BLZF1Q9H2G9 400 aa16.51■□□□□ 0.23
VLDLR-202ENST00000382099 VPS54Q9P1Q0 977 aa16.51■□□□□ 0.23
VLDLR-202ENST00000382099 ANKIB1Q9P2G1 1089 aa16.51■□□□□ 0.23
VLDLR-202ENST00000382099 TRIM33Q9UPN9 1127 aa16.51■□□□□ 0.23
VLDLR-202ENST00000382099 TNRQ92752 1358 aa16.5■□□□□ 0.23
VLDLR-202ENST00000382099 NPTXRO95502 500 aa16.5■□□□□ 0.23
VLDLR-202ENST00000382099 MMEP08473 750 aa16.5■□□□□ 0.23
VLDLR-202ENST00000382099 GBP1P32455 592 aa16.5■□□□□ 0.23
VLDLR-202ENST00000382099 CEP128Q6ZU80 1094 aa16.5■□□□□ 0.23
VLDLR-202ENST00000382099 CACNA2D4Q7Z3S7 1137 aa16.5■□□□□ 0.23
VLDLR-202ENST00000382099 WHAMMQ8TF30 809 aa16.5■□□□□ 0.23
VLDLR-202ENST00000382099 NDNQ99608 321 aa16.5■□□□□ 0.23
VLDLR-202ENST00000382099 MMTAG2Q9BU76 263 aaKnown RBP16.5■□□□□ 0.23
VLDLR-202ENST00000382099 IFIH1Q9BYX4 1025 aaKnown RBP16.5■□□□□ 0.23
VLDLR-202ENST00000382099 ADAM22Q9P0K1 906 aa16.5■□□□□ 0.23
VLDLR-202ENST00000382099 ZMYND8Q9ULU4 1186 aaPredicted RBP16.5■□□□□ 0.23
VLDLR-202ENST00000382099 CETN3O15182 167 aa16.5■□□□□ 0.23
VLDLR-202ENST00000382099 SP100P23497 879 aaPredicted RBP16.5■□□□□ 0.23
VLDLR-202ENST00000382099 HOXC9P31274 260 aa16.5■□□□□ 0.23
VLDLR-202ENST00000382099 SEPT2Q15019 361 aa16.5■□□□□ 0.23
VLDLR-202ENST00000382099 EMC10Q5UCC4 262 aa16.5■□□□□ 0.23
VLDLR-202ENST00000382099 LRRC34Q8IZ02 419 aa16.5■□□□□ 0.23
VLDLR-202ENST00000382099 RUBCNQ92622 972 aa16.5■□□□□ 0.23
VLDLR-202ENST00000382099 MAP3K14Q99558 947 aa16.5■□□□□ 0.23
VLDLR-202ENST00000382099 AGPAT5Q9NUQ2 364 aa16.5■□□□□ 0.23
VLDLR-202ENST00000382099 DEUP1Q05D60 604 aa16.49■□□□□ 0.23
VLDLR-202ENST00000382099 SLC39A6Q13433 755 aa16.49■□□□□ 0.23
VLDLR-202ENST00000382099 MUM1Q2TAK8 710 aa16.49■□□□□ 0.23
VLDLR-202ENST00000382099 Q4G0T1 1027 aa16.49■□□□□ 0.23
VLDLR-202ENST00000382099 FAM47EQ6ZV65 393 aa16.49■□□□□ 0.23
VLDLR-202ENST00000382099 MICU3Q86XE3 530 aa16.49■□□□□ 0.23
VLDLR-202ENST00000382099 DDX42Q86XP3 938 aaKnown RBP eCLIP16.49■□□□□ 0.23
VLDLR-202ENST00000382099 RNF10Q8N5U6 811 aaKnown RBP16.49■□□□□ 0.23
VLDLR-202ENST00000382099 DDX23Q9BUQ8 820 aaKnown RBP16.49■□□□□ 0.23
VLDLR-202ENST00000382099 IQCGQ9H095 443 aaKnown RBP16.49■□□□□ 0.23
VLDLR-202ENST00000382099 ZNF609O15014 1411 aa16.49■□□□□ 0.23
VLDLR-202ENST00000382099 IFIT3O14879 490 aaKnown RBP16.49■□□□□ 0.23
VLDLR-202ENST00000382099 CYP27B1O15528 508 aa16.49■□□□□ 0.23
VLDLR-202ENST00000382099 SHBGP04278 402 aa16.49■□□□□ 0.23
VLDLR-202ENST00000382099 SERPINB4P48594 390 aa16.49■□□□□ 0.23
VLDLR-202ENST00000382099 NCALDP61601 193 aa16.49■□□□□ 0.23
VLDLR-202ENST00000382099 SPAG1Q07617 926 aa16.49■□□□□ 0.23
VLDLR-202ENST00000382099 ZNF844Q08AG5 666 aa16.49■□□□□ 0.23
VLDLR-202ENST00000382099 WDR59Q6PJI9 974 aa16.49■□□□□ 0.23
VLDLR-202ENST00000382099 CCDC82Q8N4S0 544 aa16.49■□□□□ 0.23
VLDLR-202ENST00000382099 GBP5Q96PP8 586 aa16.49■□□□□ 0.23
VLDLR-202ENST00000382099 MARF1Q9Y4F3 1742 aaKnown RBP16.49■□□□□ 0.23
VLDLR-202ENST00000382099 CUL4BQ13620 913 aa16.49■□□□□ 0.23
VLDLR-202ENST00000382099 TSNAXIP1Q2TAA8 658 aa16.49■□□□□ 0.23
VLDLR-202ENST00000382099 ATL2Q8NHH9 583 aa16.49■□□□□ 0.23
VLDLR-202ENST00000382099 IFT74Q96LB3 600 aa16.49■□□□□ 0.23
VLDLR-202ENST00000382099 PNMA2Q9UL42 364 aa16.49■□□□□ 0.23
VLDLR-202ENST00000382099 DPYDQ12882 1025 aa16.48■□□□□ 0.23
VLDLR-202ENST00000382099 BIRC3Q13489 604 aa16.48■□□□□ 0.23
VLDLR-202ENST00000382099 RNF168Q8IYW5 571 aaPredicted RBP16.48■□□□□ 0.23
VLDLR-202ENST00000382099 SCOCQ9UIL1 159 aa16.48■□□□□ 0.23
VLDLR-202ENST00000382099 PROSER3Q2NL68 480 aa16.48■□□□□ 0.23
VLDLR-202ENST00000382099 TCP11X2Q5H9J9 407 aa16.48■□□□□ 0.23
VLDLR-202ENST00000382099 TCERG1LQ5VWI1 586 aa16.48■□□□□ 0.23
VLDLR-202ENST00000382099 TYW1BQ6NUM6 668 aa16.48■□□□□ 0.23
VLDLR-202ENST00000382099 GIGYF2Q6Y7W6 1299 aaKnown RBP16.48■□□□□ 0.23
VLDLR-202ENST00000382099 LBHD1Q9BQE6 289 aaPredicted RBP16.48■□□□□ 0.23
VLDLR-202ENST00000382099 GOLGB1Q14789 3259 aaKnown RBP16.48■□□□□ 0.23
VLDLR-202ENST00000382099 NUTM2BA6NNL0 878 aaPredicted RBP16.47■□□□□ 0.23
VLDLR-202ENST00000382099 NUTM2EB1AL46 878 aaPredicted RBP16.47■□□□□ 0.23
VLDLR-202ENST00000382099 AKR1B10O60218 316 aa16.47■□□□□ 0.23
VLDLR-202ENST00000382099 FLOT1O75955 427 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms