RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 LINC01553A4QN01 128 aa20.55■□□□□ 0.88
HMGN1-203ENST00000380748 A6NJR5 290 aa20.55■□□□□ 0.88
HMGN1-203ENST00000380748 ALADP13716 330 aa20.55■□□□□ 0.88
HMGN1-203ENST00000380748 PDE4BQ07343 736 aa20.55■□□□□ 0.88
HMGN1-203ENST00000380748 PTGISQ16647 500 aa20.55■□□□□ 0.88
HMGN1-203ENST00000380748 CSPP1Q1MSJ5 1256 aa20.55■□□□□ 0.88
HMGN1-203ENST00000380748 IFNL3Q8IZI9 196 aa20.55■□□□□ 0.88
HMGN1-203ENST00000380748 KBTBD3Q8NAB2 608 aa20.55■□□□□ 0.88
HMGN1-203ENST00000380748 RAD9AQ99638 391 aa20.55■□□□□ 0.88
HMGN1-203ENST00000380748 STX8Q9UNK0 236 aa20.55■□□□□ 0.88
HMGN1-203ENST00000380748 MTMR7Q9Y216 660 aa20.55■□□□□ 0.88
HMGN1-203ENST00000380748 TRIOO75962 3097 aa20.54■□□□□ 0.88
HMGN1-203ENST00000380748 PTPDC1A2A3K4 754 aa20.54■□□□□ 0.88
HMGN1-203ENST00000380748 RNF113AO15541 343 aaKnown RBP20.54■□□□□ 0.88
HMGN1-203ENST00000380748 SMARCA5O60264 1052 aaPredicted RBP20.54■□□□□ 0.88
HMGN1-203ENST00000380748 KPNA6O60684 536 aa20.54■□□□□ 0.88
HMGN1-203ENST00000380748 GJB5O95377 273 aa20.54■□□□□ 0.88
HMGN1-203ENST00000380748 GNAT2P19087 354 aa20.54■□□□□ 0.88
HMGN1-203ENST00000380748 CNKSR3Q6P9H4 555 aa20.54■□□□□ 0.88
HMGN1-203ENST00000380748 CAGE1Q8TC20 777 aa20.54■□□□□ 0.88
HMGN1-203ENST00000380748 AFAP1L1Q8TED9 768 aa20.54■□□□□ 0.88
HMGN1-203ENST00000380748 DHX38Q92620 1227 aaKnown RBP20.54■□□□□ 0.88
HMGN1-203ENST00000380748 FBXL18Q96ME1 805 aa20.54■□□□□ 0.88
HMGN1-203ENST00000380748 LOC102724159A0A0B4J2E5 919 aa20.53■□□□□ 0.88
HMGN1-203ENST00000380748 GRXCR2A6NFK2 248 aa20.53■□□□□ 0.88
HMGN1-203ENST00000380748 PATL2C9JE40 543 aaKnown RBP20.53■□□□□ 0.88
HMGN1-203ENST00000380748 NKRFO15226 690 aaKnown RBP eCLIP20.53■□□□□ 0.88
HMGN1-203ENST00000380748 NMT2O60551 498 aa20.53■□□□□ 0.88
HMGN1-203ENST00000380748 CALML3P27482 149 aa20.53■□□□□ 0.88
HMGN1-203ENST00000380748 PWP2Q15269 919 aaKnown RBP20.53■□□□□ 0.88
HMGN1-203ENST00000380748 GDF6Q6KF10 455 aaPredicted RBP20.53■□□□□ 0.88
HMGN1-203ENST00000380748 FAM117BQ6P1L5 589 aa20.53■□□□□ 0.88
HMGN1-203ENST00000380748 LRRC8DQ7L1W4 858 aa20.53■□□□□ 0.88
HMGN1-203ENST00000380748 CCDC155Q8N6L0 562 aa20.53■□□□□ 0.88
HMGN1-203ENST00000380748 RANBP17Q9H2T7 1088 aaKnown RBP20.53■□□□□ 0.88
HMGN1-203ENST00000380748 CCER2I3L3R5 266 aa20.52■□□□□ 0.88
HMGN1-203ENST00000380748 NBNO60934 754 aa20.52■□□□□ 0.88
HMGN1-203ENST00000380748 ARIH2O95376 493 aa20.52■□□□□ 0.88
HMGN1-203ENST00000380748 SELPP16109 830 aa20.52■□□□□ 0.88
HMGN1-203ENST00000380748 SLC16A2P36021 539 aa20.52■□□□□ 0.88
HMGN1-203ENST00000380748 PDE4DQ08499 809 aa20.52■□□□□ 0.88
HMGN1-203ENST00000380748 CCDC96Q2M329 555 aa20.52■□□□□ 0.88
HMGN1-203ENST00000380748 TTBK2Q6IQ55 1244 aa20.52■□□□□ 0.88
HMGN1-203ENST00000380748 SCFD2Q8WU76 684 aa20.52■□□□□ 0.88
HMGN1-203ENST00000380748 IL17RBQ9NRM6 502 aa20.52■□□□□ 0.88
HMGN1-203ENST00000380748 ECHDC1Q9NTX5 307 aa20.52■□□□□ 0.88
HMGN1-203ENST00000380748 ZBTB40Q9NUA8 1239 aa20.52■□□□□ 0.88
HMGN1-203ENST00000380748 ZNF318Q5VUA4 2279 aa20.51■□□□□ 0.87
HMGN1-203ENST00000380748 H3BQ06 376 aaPredicted RBP20.51■□□□□ 0.87
HMGN1-203ENST00000380748 DCXO43602 365 aa20.51■□□□□ 0.87
HMGN1-203ENST00000380748 CXCL10P02778 98 aa20.51■□□□□ 0.87
HMGN1-203ENST00000380748 TXNP10599 105 aaKnown RBP20.51■□□□□ 0.87
HMGN1-203ENST00000380748 EDNRBP24530 442 aa20.51■□□□□ 0.87
HMGN1-203ENST00000380748 PPARAQ07869 468 aa20.51■□□□□ 0.87
HMGN1-203ENST00000380748 TSHZ3Q63HK5 1081 aa20.51■□□□□ 0.87
HMGN1-203ENST00000380748 CLEC4DQ8WXI8 215 aa20.51■□□□□ 0.87
HMGN1-203ENST00000380748 SNX27Q96L92 541 aa20.51■□□□□ 0.87
HMGN1-203ENST00000380748 C17orf80Q9BSJ5 609 aa20.51■□□□□ 0.87
HMGN1-203ENST00000380748 LRRCC1Q9C099 1032 aa20.51■□□□□ 0.87
HMGN1-203ENST00000380748 SLC3A2P08195 630 aaKnown RBP20.5■□□□□ 0.87
HMGN1-203ENST00000380748 FBXO22Q8NEZ5 403 aa20.5■□□□□ 0.87
HMGN1-203ENST00000380748 NEK9Q8TD19 979 aa20.5■□□□□ 0.87
HMGN1-203ENST00000380748 ANKS1AQ92625 1134 aa20.5■□□□□ 0.87
HMGN1-203ENST00000380748 CRBNQ96SW2 442 aa20.5■□□□□ 0.87
HMGN1-203ENST00000380748 SEC62Q99442 399 aaKnown RBP20.5■□□□□ 0.87
HMGN1-203ENST00000380748 NACAP1Q9BZK3 213 aa20.5■□□□□ 0.87
HMGN1-203ENST00000380748 INCENPQ9NQS7 918 aa20.5■□□□□ 0.87
HMGN1-203ENST00000380748 C5orf42Q9H799 3197 aa20.49■□□□□ 0.87
HMGN1-203ENST00000380748 ABHD14A-ACY1A0A1B0GW23 586 aa20.49■□□□□ 0.87
HMGN1-203ENST00000380748 POTEB3A0JP26 581 aa20.49■□□□□ 0.87
HMGN1-203ENST00000380748 TSPY2A6NKD2 308 aa20.49■□□□□ 0.87
HMGN1-203ENST00000380748 ZFYP08048 801 aaPredicted RBP20.49■□□□□ 0.87
HMGN1-203ENST00000380748 CKBP12277 381 aa20.49■□□□□ 0.87
HMGN1-203ENST00000380748 RBL2Q08999 1139 aa20.49■□□□□ 0.87
HMGN1-203ENST00000380748 PPP4R3BQ5MIZ7 849 aa20.49■□□□□ 0.87
HMGN1-203ENST00000380748 POTEBQ6S5H4 581 aa20.49■□□□□ 0.87
HMGN1-203ENST00000380748 RNF207Q6ZRF8 634 aa20.49■□□□□ 0.87
HMGN1-203ENST00000380748 SESTD1Q86VW0 696 aa20.49■□□□□ 0.87
HMGN1-203ENST00000380748 AFG1LQ8WV93 481 aa20.49■□□□□ 0.87
HMGN1-203ENST00000380748 NAPBQ9H115 298 aa20.49■□□□□ 0.87
HMGN1-203ENST00000380748 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.49■□□□□ 0.87
HMGN1-203ENST00000380748 RPS6P62753 249 aaKnown RBP20.48■□□□□ 0.87
HMGN1-203ENST00000380748 SYDE2Q5VT97 1194 aa20.48■□□□□ 0.87
HMGN1-203ENST00000380748 DCAF4Q8WV16 495 aa20.48■□□□□ 0.87
HMGN1-203ENST00000380748 KAT2BQ92831 832 aa20.48■□□□□ 0.87
HMGN1-203ENST00000380748 KCNH6Q9H252 994 aa20.48■□□□□ 0.87
HMGN1-203ENST00000380748 PARNO95453 639 aaKnown RBP20.47■□□□□ 0.87
HMGN1-203ENST00000380748 MMP3P08254 477 aa20.47■□□□□ 0.87
HMGN1-203ENST00000380748 ZP2Q05996 745 aa20.47■□□□□ 0.87
HMGN1-203ENST00000380748 CTDSPL2Q05D32 466 aa20.47■□□□□ 0.87
HMGN1-203ENST00000380748 PUS10Q3MIT2 529 aaKnown RBP20.47■□□□□ 0.87
HMGN1-203ENST00000380748 BTNL9Q6UXG8 535 aa20.47■□□□□ 0.87
HMGN1-203ENST00000380748 MRPL38Q96DV4 380 aaKnown RBP20.47■□□□□ 0.87
HMGN1-203ENST00000380748 DDX19BQ9UMR2 479 aa20.47■□□□□ 0.87
HMGN1-203ENST00000380748 FRMPD2Q68DX3 1309 aaPredicted RBP20.47■□□□□ 0.87
HMGN1-203ENST00000380748 IKBKEQ14164 716 aa20.46■□□□□ 0.87
HMGN1-203ENST00000380748 MBTPS1Q14703 1052 aa20.46■□□□□ 0.87
HMGN1-203ENST00000380748 TRAF7Q6Q0C0 670 aa20.46■□□□□ 0.87
HMGN1-203ENST00000380748 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.46■□□□□ 0.871e-8■■■□□ 16.2
HMGN1-203ENST00000380748 HFE2Q6ZVN8 426 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms