RNA–Protein interactions for RNA: ENST00000379516.6

SNX2-201, Transcript of sorting nexin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX2, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-201ENST00000379516 INTS13Q9NVM9 706 aa16.91■□□□□ 0.3
SNX2-201ENST00000379516 RWDD2AQ9UIY3 292 aa16.91■□□□□ 0.3
SNX2-201ENST00000379516 ASTN2O75129 1339 aaPredicted RBP16.91■□□□□ 0.3
SNX2-201ENST00000379516 CYP3A7-CYP3A51PA0A087WV96 503 aa16.91■□□□□ 0.3
SNX2-201ENST00000379516 OPLAHO14841 1288 aa16.91■□□□□ 0.3
SNX2-201ENST00000379516 FOSP01100 380 aaPredicted RBP16.91■□□□□ 0.3
SNX2-201ENST00000379516 CYP3A7P24462 503 aa16.91■□□□□ 0.3
SNX2-201ENST00000379516 HOXA13P31271 388 aaPredicted RBP16.91■□□□□ 0.3
SNX2-201ENST00000379516 PRCPP42785 496 aa16.91■□□□□ 0.3
SNX2-201ENST00000379516 CCZ1BP86790 482 aa16.91■□□□□ 0.3
SNX2-201ENST00000379516 CCZ1P86791 482 aaPredicted RBP16.91■□□□□ 0.3
SNX2-201ENST00000379516 TRAF1Q13077 416 aa16.91■□□□□ 0.3
SNX2-201ENST00000379516 ARMCX5Q6P1M9 558 aa16.91■□□□□ 0.3
SNX2-201ENST00000379516 SV2BQ7L1I2 683 aa16.91■□□□□ 0.3
SNX2-201ENST00000379516 NELFBQ8WX92 580 aa16.91■□□□□ 0.3
SNX2-201ENST00000379516 UIMC1Q96RL1 719 aa16.91■□□□□ 0.3
SNX2-201ENST00000379516 FEZ1Q99689 392 aa16.91■□□□□ 0.3
SNX2-201ENST00000379516 C7orf25Q9BPX7 421 aa16.91■□□□□ 0.3
SNX2-201ENST00000379516 NUDT12Q9BQG2 462 aa16.91■□□□□ 0.3
SNX2-201ENST00000379516 ZNF341Q9BYN7 854 aa16.91■□□□□ 0.3
SNX2-201ENST00000379516 HACL1Q9UJ83 578 aa16.91■□□□□ 0.3
SNX2-201ENST00000379516 RHOBTB3O94955 611 aa16.9■□□□□ 0.3
SNX2-201ENST00000379516 SFPQP23246 707 aaKnown RBP eCLIP16.9■□□□□ 0.3
SNX2-201ENST00000379516 CCDC47Q96A33 483 aaKnown RBP16.9■□□□□ 0.3
SNX2-201ENST00000379516 RANBP17Q9H2T7 1088 aaKnown RBP16.9■□□□□ 0.3
SNX2-201ENST00000379516 R3HCC1Q9Y3T6 440 aaKnown RBP16.9■□□□□ 0.3
SNX2-201ENST00000379516 ASIC1P78348 528 aa16.9■□□□□ 0.3
SNX2-201ENST00000379516 SEMA3FQ13275 785 aa16.9■□□□□ 0.3
SNX2-201ENST00000379516 KIF4BQ2VIQ3 1234 aa16.9■□□□□ 0.3
SNX2-201ENST00000379516 CDKAL1Q5VV42 579 aa16.9■□□□□ 0.3
SNX2-201ENST00000379516 MOXD1Q6UVY6 613 aa16.9■□□□□ 0.3
SNX2-201ENST00000379516 FAM160B2Q86V87 743 aa16.9■□□□□ 0.3
SNX2-201ENST00000379516 CRYGNQ8WXF5 182 aa16.9■□□□□ 0.3
SNX2-201ENST00000379516 KCNMB3Q9NPA1 279 aa16.9■□□□□ 0.3
SNX2-201ENST00000379516 BLOC1S4Q9NUP1 217 aa16.9■□□□□ 0.3
SNX2-201ENST00000379516 STK17AQ9UEE5 414 aa16.9■□□□□ 0.3
SNX2-201ENST00000379516 FEM1BQ9UK73 627 aa16.9■□□□□ 0.3
SNX2-201ENST00000379516 PLA2G6O60733 806 aa16.89■□□□□ 0.29
SNX2-201ENST00000379516 MCM6Q14566 821 aa16.89■□□□□ 0.29
SNX2-201ENST00000379516 ADSSL1Q8N142 457 aa16.89■□□□□ 0.29
SNX2-201ENST00000379516 GIMAP8Q8ND71 665 aaPredicted RBP16.89■□□□□ 0.29
SNX2-201ENST00000379516 LARP4BQ92615 738 aaKnown RBP16.89■□□□□ 0.29
SNX2-201ENST00000379516 MBOAT7Q96N66 472 aa16.89■□□□□ 0.29
SNX2-201ENST00000379516 DEFB129Q9H1M3 183 aa16.89■□□□□ 0.29
SNX2-201ENST00000379516 EXOC1Q9NV70 894 aa16.89■□□□□ 0.29
SNX2-201ENST00000379516 FBXO28Q9NVF7 368 aa16.89■□□□□ 0.29
SNX2-201ENST00000379516 CFBP00751 764 aa16.88■□□□□ 0.29
SNX2-201ENST00000379516 SREBF1P36956 1147 aa16.88■□□□□ 0.29
SNX2-201ENST00000379516 PDE4DQ08499 809 aa16.88■□□□□ 0.29
SNX2-201ENST00000379516 STIM1Q13586 685 aa16.88■□□□□ 0.29
SNX2-201ENST00000379516 PRR16Q569H4 304 aa16.88■□□□□ 0.29
SNX2-201ENST00000379516 ZNF541Q9H0D2 1346 aa16.88■□□□□ 0.29
SNX2-201ENST00000379516 MYH7BA7E2Y1 1941 aa16.88■□□□□ 0.29
SNX2-201ENST00000379516 PIK3CDO00329 1044 aa16.88■□□□□ 0.29
SNX2-201ENST00000379516 NR1I3Q14994 352 aa16.88■□□□□ 0.29
SNX2-201ENST00000379516 FCHSD1Q86WN1 690 aa16.88■□□□□ 0.29
SNX2-201ENST00000379516 SLFN12Q8IYM2 578 aa16.88■□□□□ 0.29
SNX2-201ENST00000379516 A0A1B0GTH6 734 aa16.87■□□□□ 0.29
SNX2-201ENST00000379516 ECM1Q16610 540 aa16.87■□□□□ 0.29
SNX2-201ENST00000379516 TMEM119Q4V9L6 283 aa16.87■□□□□ 0.29
SNX2-201ENST00000379516 TBC1D5Q92609 795 aa16.87■□□□□ 0.29
SNX2-201ENST00000379516 RAD54LQ92698 747 aa16.87■□□□□ 0.29
SNX2-201ENST00000379516 UPF1Q92900 1129 aaKnown RBP eCLIP16.87■□□□□ 0.29
SNX2-201ENST00000379516 CTAGE1Q96RT6 745 aa16.87■□□□□ 0.29
SNX2-201ENST00000379516 MYMKA6NI61 221 aa16.87■□□□□ 0.29
SNX2-201ENST00000379516 FAM86B1E9PN63 330 aa16.87■□□□□ 0.29
SNX2-201ENST00000379516 H7C1D1 291 aa16.87■□□□□ 0.29
SNX2-201ENST00000379516 CTNND1O60716 968 aaKnown RBP16.87■□□□□ 0.29
SNX2-201ENST00000379516 FAM86B2P0C5J1 330 aa16.87■□□□□ 0.29
SNX2-201ENST00000379516 CCT6AP40227 531 aaKnown RBP16.87■□□□□ 0.29
SNX2-201ENST00000379516 Q4G0T1 1027 aa16.87■□□□□ 0.29
SNX2-201ENST00000379516 NBPF12Q5TAG4 269 aaPredicted RBP16.87■□□□□ 0.29
SNX2-201ENST00000379516 SPECC1LQ69YQ0 1117 aa16.87■□□□□ 0.29
SNX2-201ENST00000379516 APTXQ7Z2E3 356 aaKnown RBP16.87■□□□□ 0.29
SNX2-201ENST00000379516 KCNK18Q7Z418 384 aa16.87■□□□□ 0.29
SNX2-201ENST00000379516 MRPL11Q9Y3B7 192 aaKnown RBP16.87■□□□□ 0.29
SNX2-201ENST00000379516 UTRNP46939 3433 aa16.87■□□□□ 0.29
SNX2-201ENST00000379516 GCOM1H8Y6P7 765 aaPredicted RBP16.86■□□□□ 0.29
SNX2-201ENST00000379516 PSMA7O14818 248 aa16.86■□□□□ 0.29
SNX2-201ENST00000379516 NRDCO43847 1150 aa16.86■□□□□ 0.29
SNX2-201ENST00000379516 POLR2MP0CAP2 368 aa16.86■□□□□ 0.29
SNX2-201ENST00000379516 INPP5BP32019 993 aa16.86■□□□□ 0.29
SNX2-201ENST00000379516 ZNF76P36508 570 aa16.86■□□□□ 0.29
SNX2-201ENST00000379516 FILIP1LQ4L180 1135 aa16.86■□□□□ 0.29
SNX2-201ENST00000379516 ETNPPLQ8TBG4 499 aa16.86■□□□□ 0.29
SNX2-201ENST00000379516 TRIM49BA6NDI0 452 aa16.85■□□□□ 0.29
SNX2-201ENST00000379516 STAT3P40763 770 aa16.85■□□□□ 0.29
SNX2-201ENST00000379516 DYMQ7RTS9 669 aa16.85■□□□□ 0.29
SNX2-201ENST00000379516 CREBRFQ8IUR6 639 aa16.85■□□□□ 0.29
SNX2-201ENST00000379516 NT5C3AQ9H0P0 336 aa16.85■□□□□ 0.29
SNX2-201ENST00000379516 ADD3Q9UEY8 706 aaKnown RBP16.85■□□□□ 0.29
SNX2-201ENST00000379516 KDM3AQ9Y4C1 1321 aa16.85■□□□□ 0.29
SNX2-201ENST00000379516 TBX3O15119 743 aa16.85■□□□□ 0.29
SNX2-201ENST00000379516 TEX33O43247 280 aa16.85■□□□□ 0.29
SNX2-201ENST00000379516 FCER1AP12319 257 aa16.85■□□□□ 0.29
SNX2-201ENST00000379516 CIITAP33076 1130 aa16.85■□□□□ 0.29
SNX2-201ENST00000379516 STK4Q13043 487 aa16.85■□□□□ 0.29
SNX2-201ENST00000379516 CNNM4Q6P4Q7 775 aa16.85■□□□□ 0.29
SNX2-201ENST00000379516 LDHDQ86WU2 507 aa16.85■□□□□ 0.29
SNX2-201ENST00000379516 LENG9Q96B70 501 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms