RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 FCER1AP12319 257 aa16.65■□□□□ 0.26
PRNP-201ENST00000379440 DPEP1P16444 411 aa16.65■□□□□ 0.26
PRNP-201ENST00000379440 COPB1P53618 953 aaKnown RBP16.65■□□□□ 0.26
PRNP-201ENST00000379440 STK4Q13043 487 aa16.65■□□□□ 0.26
PRNP-201ENST00000379440 MCM6Q14566 821 aa16.65■□□□□ 0.26
PRNP-201ENST00000379440 TMEM132AQ24JP5 1023 aa16.65■□□□□ 0.26
PRNP-201ENST00000379440 CCDC93Q567U6 631 aa16.65■□□□□ 0.26
PRNP-201ENST00000379440 RSBN1LQ6PCB5 846 aaPredicted RBP16.65■□□□□ 0.26
PRNP-201ENST00000379440 LARGE2Q8N3Y3 721 aa16.65■□□□□ 0.26
PRNP-201ENST00000379440 KIF18AQ8NI77 898 aa16.65■□□□□ 0.26
PRNP-201ENST00000379440 MAGEF1Q9HAY2 307 aa16.65■□□□□ 0.26
PRNP-201ENST00000379440 KCNA3P22001 575 aa16.65■□□□□ 0.26
PRNP-201ENST00000379440 REXO1L1PQ8IX06 675 aa16.65■□□□□ 0.26
PRNP-201ENST00000379440 EEF2KMTQ96G04 330 aa16.65■□□□□ 0.26
PRNP-201ENST00000379440 SPDYE2BA6NHP3 402 aa16.64■□□□□ 0.26
PRNP-201ENST00000379440 H7C1D1 291 aa16.64■□□□□ 0.26
PRNP-201ENST00000379440 STX10O60499 249 aa16.64■□□□□ 0.26
PRNP-201ENST00000379440 SPDYE6P0CI01 402 aa16.64■□□□□ 0.26
PRNP-201ENST00000379440 IKQ13123 557 aaPredicted RBP16.64■□□□□ 0.26
PRNP-201ENST00000379440 TOGARAM2Q6ZUX3 1019 aa16.64■□□□□ 0.26
PRNP-201ENST00000379440 PPFIBP1Q86W92 1011 aa16.64■□□□□ 0.26
PRNP-201ENST00000379440 SPICE1Q8N0Z3 855 aa16.64■□□□□ 0.26
PRNP-201ENST00000379440 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.64■□□□□ 0.26
PRNP-201ENST00000379440 CASP14P31944 242 aa16.64■□□□□ 0.25
PRNP-201ENST00000379440 PDIA5Q14554 519 aa16.64■□□□□ 0.25
PRNP-201ENST00000379440 NAA30Q147X3 362 aaPredicted RBP16.64■□□□□ 0.25
PRNP-201ENST00000379440 USH1GQ495M9 461 aa16.64■□□□□ 0.25
PRNP-201ENST00000379440 SNX29Q8TEQ0 813 aa16.64■□□□□ 0.25
PRNP-201ENST00000379440 SRRTQ9BXP5 876 aaKnown RBP16.64■□□□□ 0.25
PRNP-201ENST00000379440 EXOC1Q9NV70 894 aa16.64■□□□□ 0.25
PRNP-201ENST00000379440 MYH7BA7E2Y1 1941 aa16.64■□□□□ 0.25
PRNP-201ENST00000379440 COL4A5P29400 1685 aa16.63■□□□□ 0.25
PRNP-201ENST00000379440 STIM1Q13586 685 aa16.63■□□□□ 0.25
PRNP-201ENST00000379440 MTF1Q14872 753 aa16.63■□□□□ 0.25
PRNP-201ENST00000379440 ECM1Q16610 540 aa16.63■□□□□ 0.25
PRNP-201ENST00000379440 SV2BQ7L1I2 683 aa16.63■□□□□ 0.25
PRNP-201ENST00000379440 KCNK18Q7Z418 384 aa16.63■□□□□ 0.25
PRNP-201ENST00000379440 GMCL1P1Q8NEA9 526 aa16.63■□□□□ 0.25
PRNP-201ENST00000379440 CDK5RAP3Q96JB5 506 aa16.63■□□□□ 0.25
PRNP-201ENST00000379440 P2RX7Q99572 595 aaKnown RBP16.63■□□□□ 0.25
PRNP-201ENST00000379440 YY1AP1Q9H869 796 aa16.63■□□□□ 0.25
PRNP-201ENST00000379440 PPP2R2CQ9Y2T4 447 aa16.63■□□□□ 0.25
PRNP-201ENST00000379440 MYMKA6NI61 221 aa16.63■□□□□ 0.25
PRNP-201ENST00000379440 PSMA7O14818 248 aa16.63■□□□□ 0.25
PRNP-201ENST00000379440 MARCH6O60337 910 aa16.63■□□□□ 0.25
PRNP-201ENST00000379440 ECE1P42892 770 aa16.63■□□□□ 0.25
PRNP-201ENST00000379440 FXR1P51114 621 aaKnown RBP eCLIP16.63■□□□□ 0.25
PRNP-201ENST00000379440 AMPD3Q01432 767 aa16.63■□□□□ 0.25
PRNP-201ENST00000379440 SPAG1Q07617 926 aa16.63■□□□□ 0.25
PRNP-201ENST00000379440 DYMQ7RTS9 669 aa16.63■□□□□ 0.25
PRNP-201ENST00000379440 RTKN2Q8IZC4 609 aa16.63■□□□□ 0.25
PRNP-201ENST00000379440 TRIM47Q96LD4 638 aa16.63■□□□□ 0.25
PRNP-201ENST00000379440 RAB34Q9BZG1 259 aa16.63■□□□□ 0.25
PRNP-201ENST00000379440 GEMIN8Q9NWZ8 242 aaKnown RBP16.63■□□□□ 0.25
PRNP-201ENST00000379440 ZNF70Q9UC06 446 aaPredicted RBP16.63■□□□□ 0.25
PRNP-201ENST00000379440 KIF2AO00139 706 aaPredicted RBP16.63■□□□□ 0.25
PRNP-201ENST00000379440 MEIS2O14770 477 aa16.63■□□□□ 0.25
PRNP-201ENST00000379440 GYPCP04921 128 aa16.63■□□□□ 0.25
PRNP-201ENST00000379440 VIL1P09327 827 aaKnown RBP16.63■□□□□ 0.25
PRNP-201ENST00000379440 DLGAP5Q15398 846 aa16.63■□□□□ 0.25
PRNP-201ENST00000379440 KRT79Q5XKE5 535 aa16.63■□□□□ 0.25
PRNP-201ENST00000379440 TTI2Q6NXR4 508 aa16.63■□□□□ 0.25
PRNP-201ENST00000379440 CDAN1Q8IWY9 1227 aa16.63■□□□□ 0.25
PRNP-201ENST00000379440 LARP4BQ92615 738 aaKnown RBP16.63■□□□□ 0.25
PRNP-201ENST00000379440 GMLQ99445 158 aa16.63■□□□□ 0.25
PRNP-201ENST00000379440 DESI2Q9BSY9 194 aa16.63■□□□□ 0.25
PRNP-201ENST00000379440 TMOD2Q9NZR1 351 aa16.63■□□□□ 0.25
PRNP-201ENST00000379440 SOWAHDA6NJG2 315 aa16.62■□□□□ 0.25
PRNP-201ENST00000379440 RNF225M0QZC1 329 aaPredicted RBP16.62■□□□□ 0.25
PRNP-201ENST00000379440 BMP3P12645 472 aa16.62■□□□□ 0.25
PRNP-201ENST00000379440 FCHSD1Q86WN1 690 aa16.62■□□□□ 0.25
PRNP-201ENST00000379440 ANKRD20A12PQ8NF67 263 aa16.62■□□□□ 0.25
PRNP-201ENST00000379440 GMCL1Q96IK5 515 aa16.62■□□□□ 0.25
PRNP-201ENST00000379440 PSMD1Q99460 953 aa16.62■□□□□ 0.25
PRNP-201ENST00000379440 DUSP9Q99956 384 aaKnown RBP16.62■□□□□ 0.25
PRNP-201ENST00000379440 ANO3Q9BYT9 981 aa16.62■□□□□ 0.25
PRNP-201ENST00000379440 SLC39A2Q9NP94 309 aa16.62■□□□□ 0.25
PRNP-201ENST00000379440 PCDHA12Q9UN75 941 aa16.62■□□□□ 0.25
PRNP-201ENST00000379440 CCP110O43303 1012 aa16.62■□□□□ 0.25
PRNP-201ENST00000379440 SYDE2Q5VT97 1194 aa16.62■□□□□ 0.25
PRNP-201ENST00000379440 ANKRD40Q6AI12 368 aa16.62■□□□□ 0.25
PRNP-201ENST00000379440 TRIM65Q6PJ69 517 aa16.62■□□□□ 0.25
PRNP-201ENST00000379440 CCDC47Q96A33 483 aaKnown RBP16.62■□□□□ 0.25
PRNP-201ENST00000379440 PANX2Q96RD6 677 aa16.62■□□□□ 0.25
PRNP-201ENST00000379440 AMNQ9BXJ7 453 aa16.62■□□□□ 0.25
PRNP-201ENST00000379440 MFAP3LO75121 409 aa16.61■□□□□ 0.25
PRNP-201ENST00000379440 KIAA1755Q5JYT7 1200 aa16.61■□□□□ 0.25
PRNP-201ENST00000379440 KIAA0895Q8NCT3 520 aa16.61■□□□□ 0.25
PRNP-201ENST00000379440 ACER1Q8TDN7 264 aa16.61■□□□□ 0.25
PRNP-201ENST00000379440 DHTKD1Q96HY7 919 aaPredicted RBP16.61■□□□□ 0.25
PRNP-201ENST00000379440 VEZTQ9HBM0 779 aa16.61■□□□□ 0.25
PRNP-201ENST00000379440 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.61■□□□□ 0.25
PRNP-201ENST00000379440 STK17AQ9UEE5 414 aa16.61■□□□□ 0.25
PRNP-201ENST00000379440 DNAI1Q9UI46 699 aa16.61■□□□□ 0.25
PRNP-201ENST00000379440 ZSCAN12O43309 604 aa16.61■□□□□ 0.25
PRNP-201ENST00000379440 ETF1P62495 437 aaKnown RBP16.61■□□□□ 0.25
PRNP-201ENST00000379440 UBXN1Q04323 297 aa16.61■□□□□ 0.25
PRNP-201ENST00000379440 FBXO11Q86XK2 927 aa16.61■□□□□ 0.25
PRNP-201ENST00000379440 OGFOD1Q8N543 542 aa16.61■□□□□ 0.25
PRNP-201ENST00000379440 RAD54LQ92698 747 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms