RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 E4F1Q66K89 784 aaPredicted RBP11.76□□□□□ -0.53
POLR2J3-201ENST00000379340 TTBK2Q6IQ55 1244 aa11.76□□□□□ -0.53
POLR2J3-201ENST00000379340 RSBN1LQ6PCB5 846 aaPredicted RBP11.76□□□□□ -0.53
POLR2J3-201ENST00000379340 MOXD1Q6UVY6 613 aa11.76□□□□□ -0.53
POLR2J3-201ENST00000379340 KCTD1Q719H9 257 aa11.76□□□□□ -0.53
POLR2J3-201ENST00000379340 APTXQ7Z2E3 356 aaKnown RBP11.76□□□□□ -0.53
POLR2J3-201ENST00000379340 PNMA8AQ86V59 439 aaPredicted RBP11.76□□□□□ -0.53
POLR2J3-201ENST00000379340 ADSSL1Q8N142 457 aa11.76□□□□□ -0.53
POLR2J3-201ENST00000379340 GIMAP8Q8ND71 665 aaPredicted RBP11.76□□□□□ -0.53
POLR2J3-201ENST00000379340 NELFBQ8WX92 580 aa11.76□□□□□ -0.53
POLR2J3-201ENST00000379340 DHTKD1Q96HY7 919 aaPredicted RBP11.76□□□□□ -0.53
POLR2J3-201ENST00000379340 MAP7D2Q96T17 732 aa11.76□□□□□ -0.53
POLR2J3-201ENST00000379340 ADD3Q9UEY8 706 aaKnown RBP11.76□□□□□ -0.53
POLR2J3-201ENST00000379340 LRWD1Q9UFC0 647 aa11.76□□□□□ -0.53
POLR2J3-201ENST00000379340 CASP8AP2Q9UKL3 1982 aa11.76□□□□□ -0.53
POLR2J3-201ENST00000379340 YDJCA8MPS7 323 aa11.75□□□□□ -0.53
POLR2J3-201ENST00000379340 PP2D1A8MPX8 630 aa11.75□□□□□ -0.53
POLR2J3-201ENST00000379340 PPP1R11O60927 126 aaPredicted RBP11.75□□□□□ -0.53
POLR2J3-201ENST00000379340 CDC25AP30304 524 aa11.75□□□□□ -0.53
POLR2J3-201ENST00000379340 PBX1P40424 430 aa11.75□□□□□ -0.53
POLR2J3-201ENST00000379340 EPS15P42566 896 aa11.75□□□□□ -0.53
POLR2J3-201ENST00000379340 TECP42680 631 aa11.75□□□□□ -0.53
POLR2J3-201ENST00000379340 TNNI2P48788 182 aa11.75□□□□□ -0.53
POLR2J3-201ENST00000379340 CACNB3P54284 484 aa11.75□□□□□ -0.53
POLR2J3-201ENST00000379340 TRIM14Q14142 442 aa11.75□□□□□ -0.53
POLR2J3-201ENST00000379340 SYCP1Q15431 976 aa11.75□□□□□ -0.53
POLR2J3-201ENST00000379340 QRICH1Q2TAL8 776 aa11.75□□□□□ -0.53
POLR2J3-201ENST00000379340 KMT5BQ4FZB7 885 aa11.75□□□□□ -0.53
POLR2J3-201ENST00000379340 SMYD4Q8IYR2 804 aaPredicted RBP11.75□□□□□ -0.53
POLR2J3-201ENST00000379340 CCDC51Q96ER9 411 aa11.75□□□□□ -0.53
POLR2J3-201ENST00000379340 CDK5RAP3Q96JB5 506 aa11.75□□□□□ -0.53
POLR2J3-201ENST00000379340 PANX2Q96RD6 677 aa11.75□□□□□ -0.53
POLR2J3-201ENST00000379340 NAA15Q9BXJ9 866 aaKnown RBP11.75□□□□□ -0.53
POLR2J3-201ENST00000379340 THAP9Q9H5L6 903 aa11.75□□□□□ -0.53
POLR2J3-201ENST00000379340 TDRD3Q9H7E2 651 aaKnown RBP11.75□□□□□ -0.53
POLR2J3-201ENST00000379340 PSTPIP2Q9H939 334 aa11.75□□□□□ -0.53
POLR2J3-201ENST00000379340 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.75□□□□□ -0.53
POLR2J3-201ENST00000379340 MYH7BA7E2Y1 1941 aa11.75□□□□□ -0.53
POLR2J3-201ENST00000379340 BICDL2A1A5D9 508 aa11.75□□□□□ -0.53
POLR2J3-201ENST00000379340 USP27XA6NNY8 438 aa11.75□□□□□ -0.53
POLR2J3-201ENST00000379340 AKR1B15C9JRZ8 316 aaPredicted RBP11.75□□□□□ -0.53
POLR2J3-201ENST00000379340 RIOK3O14730 519 aaKnown RBP11.75□□□□□ -0.53
POLR2J3-201ENST00000379340 VIL1P09327 827 aaKnown RBP11.75□□□□□ -0.53
POLR2J3-201ENST00000379340 TPM1P09493 284 aa11.75□□□□□ -0.53
POLR2J3-201ENST00000379340 EEF1GP26641 437 aaKnown RBP11.75□□□□□ -0.53
POLR2J3-201ENST00000379340 TXKP42681 527 aa11.75□□□□□ -0.53
POLR2J3-201ENST00000379340 PRCPP42785 496 aa11.75□□□□□ -0.53
POLR2J3-201ENST00000379340 USP11P51784 963 aa11.75□□□□□ -0.53
POLR2J3-201ENST00000379340 SEPT2Q15019 361 aa11.75□□□□□ -0.53
POLR2J3-201ENST00000379340 CDC37Q16543 378 aaPredicted RBP11.75□□□□□ -0.53
POLR2J3-201ENST00000379340 FKBP1CQ5VVH2 108 aa11.75□□□□□ -0.53
POLR2J3-201ENST00000379340 KRT79Q5XKE5 535 aa11.75□□□□□ -0.53
POLR2J3-201ENST00000379340 CNNM4Q6P4Q7 775 aa11.75□□□□□ -0.53
POLR2J3-201ENST00000379340 BTNL9Q6UXG8 535 aa11.75□□□□□ -0.53
POLR2J3-201ENST00000379340 SV2BQ7L1I2 683 aa11.75□□□□□ -0.53
POLR2J3-201ENST00000379340 PPFIBP1Q86W92 1011 aa11.75□□□□□ -0.53
POLR2J3-201ENST00000379340 KIF18AQ8NI77 898 aa11.75□□□□□ -0.53
POLR2J3-201ENST00000379340 PPP1R13BQ96KQ4 1090 aa11.75□□□□□ -0.53
POLR2J3-201ENST00000379340 BAG1Q99933 345 aaPredicted RBP11.75□□□□□ -0.53
POLR2J3-201ENST00000379340 AMNQ9BXJ7 453 aa11.75□□□□□ -0.53
POLR2J3-201ENST00000379340 TRIM9Q9C026 710 aa11.75□□□□□ -0.53
POLR2J3-201ENST00000379340 EXOC1Q9NV70 894 aa11.75□□□□□ -0.53
POLR2J3-201ENST00000379340 PCDHAC2Q9Y5I4 1007 aa11.75□□□□□ -0.53
POLR2J3-201ENST00000379340 GJA3Q9Y6H8 435 aa11.75□□□□□ -0.53
POLR2J3-201ENST00000379340 KDM3AQ9Y4C1 1321 aa11.74□□□□□ -0.53
POLR2J3-201ENST00000379340 PVALEFA0A1B0GWK0 134 aa11.74□□□□□ -0.53
POLR2J3-201ENST00000379340 SPDYE2BA6NHP3 402 aa11.74□□□□□ -0.53
POLR2J3-201ENST00000379340 F5H6K3 240 aa11.74□□□□□ -0.53
POLR2J3-201ENST00000379340 CTIFO43310 598 aaKnown RBP11.74□□□□□ -0.53
POLR2J3-201ENST00000379340 TDP2O95551 362 aa11.74□□□□□ -0.53
POLR2J3-201ENST00000379340 FOSP01100 380 aaPredicted RBP11.74□□□□□ -0.53
POLR2J3-201ENST00000379340 SPDYE6P0CI01 402 aa11.74□□□□□ -0.53
POLR2J3-201ENST00000379340 SLC16A2P36021 539 aa11.74□□□□□ -0.53
POLR2J3-201ENST00000379340 MMP14P50281 582 aa11.74□□□□□ -0.53
POLR2J3-201ENST00000379340 KLRC3Q07444 240 aa11.74□□□□□ -0.53
POLR2J3-201ENST00000379340 HSP90AA4PQ58FG1 418 aa11.74□□□□□ -0.53
POLR2J3-201ENST00000379340 TMEM139Q8IV31 216 aa11.74□□□□□ -0.53
POLR2J3-201ENST00000379340 CNGA4Q8IV77 575 aa11.74□□□□□ -0.53
POLR2J3-201ENST00000379340 GPC2Q8N158 579 aa11.74□□□□□ -0.53
POLR2J3-201ENST00000379340 TC2NQ8N9U0 490 aa11.74□□□□□ -0.53
POLR2J3-201ENST00000379340 MTMR14Q8NCE2 650 aa11.74□□□□□ -0.53
POLR2J3-201ENST00000379340 FAM151AQ8WW52 585 aa11.74□□□□□ -0.53
POLR2J3-201ENST00000379340 CSRNP1Q96S65 589 aa11.74□□□□□ -0.53
POLR2J3-201ENST00000379340 MMTAG2Q9BU76 263 aaKnown RBP11.74□□□□□ -0.53
POLR2J3-201ENST00000379340 ARHGEF10LQ9HCE6 1279 aa11.74□□□□□ -0.53
POLR2J3-201ENST00000379340 DDX25Q9UHL0 483 aaKnown RBP11.74□□□□□ -0.53
POLR2J3-201ENST00000379340 GDAQ9Y2T3 454 aa11.74□□□□□ -0.53
POLR2J3-201ENST00000379340 PCDHA1Q9Y5I3 950 aa11.74□□□□□ -0.53
POLR2J3-201ENST00000379340 STK24Q9Y6E0 443 aa11.74□□□□□ -0.53
POLR2J3-201ENST00000379340 CYP3A7-CYP3A51PA0A087WV96 503 aa11.73□□□□□ -0.53
POLR2J3-201ENST00000379340 KCNJ18B7U540 433 aa11.73□□□□□ -0.53
POLR2J3-201ENST00000379340 RRP9O43818 475 aaKnown RBP11.73□□□□□ -0.53
POLR2J3-201ENST00000379340 SLC37A4O43826 429 aa11.73□□□□□ -0.53
POLR2J3-201ENST00000379340 BMP3P12645 472 aa11.73□□□□□ -0.53
POLR2J3-201ENST00000379340 CYP3A7P24462 503 aa11.73□□□□□ -0.53
POLR2J3-201ENST00000379340 COPB1P53618 953 aaKnown RBP11.73□□□□□ -0.53
POLR2J3-201ENST00000379340 ASIC1P78348 528 aa11.73□□□□□ -0.53
POLR2J3-201ENST00000379340 GRB10Q13322 594 aa11.73□□□□□ -0.53
POLR2J3-201ENST00000379340 KCNJ12Q14500 433 aa11.73□□□□□ -0.53
POLR2J3-201ENST00000379340 KRT31Q15323 416 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms