RNA–Protein interactions for RNA: ENST00000378505.6

RPGR-203, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 4,767 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-203ENST00000378505 BPIFA3Q9BQP9 254 aa12.37□□□□□ -0.43
RPGR-203ENST00000378505 DHX36Q9H2U1 1008 aaKnown RBP12.37□□□□□ -0.43
RPGR-203ENST00000378505 PPANQ9NQ55 473 aaKnown RBP12.37□□□□□ -0.43
RPGR-203ENST00000378505 USP17L3A6NCW0 530 aa12.36□□□□□ -0.43
RPGR-203ENST00000378505 USP17L4A6NCW7 530 aa12.36□□□□□ -0.43
RPGR-203ENST00000378505 PTPROQ16827 1216 aa12.36□□□□□ -0.43
RPGR-203ENST00000378505 KCTD1Q719H9 257 aa12.36□□□□□ -0.43
RPGR-203ENST00000378505 USP17L1Q7RTZ2 530 aa12.36□□□□□ -0.43
RPGR-203ENST00000378505 RSRC1Q96IZ7 334 aaKnown RBP12.36□□□□□ -0.43
RPGR-203ENST00000378505 CAPS2Q9BXY5 557 aa12.36□□□□□ -0.43
RPGR-203ENST00000378505 WDR11Q9BZH6 1224 aa12.36□□□□□ -0.43
RPGR-203ENST00000378505 GOLPH3LQ9H4A5 285 aa12.36□□□□□ -0.43
RPGR-203ENST00000378505 SETD1BQ9UPS6 1966 aaKnown RBP12.36□□□□□ -0.43
RPGR-203ENST00000378505 ARL1P40616 181 aaPredicted RBP12.36□□□□□ -0.43
RPGR-203ENST00000378505 KCNQ4P56696 695 aa12.36□□□□□ -0.43
RPGR-203ENST00000378505 GRAPQ13588 217 aa12.36□□□□□ -0.43
RPGR-203ENST00000378505 KMT5BQ4FZB7 885 aa12.36□□□□□ -0.43
RPGR-203ENST00000378505 DCAF15Q66K64 600 aa12.36□□□□□ -0.43
RPGR-203ENST00000378505 PPP1R21Q6ZMI0 780 aa12.36□□□□□ -0.43
RPGR-203ENST00000378505 SYNE4Q8N205 404 aa12.36□□□□□ -0.43
RPGR-203ENST00000378505 GRAPLQ8TC17 118 aaPredicted RBP12.36□□□□□ -0.43
RPGR-203ENST00000378505 DPH5Q9H2P9 285 aa12.36□□□□□ -0.43
RPGR-203ENST00000378505 CCPG1Q9ULG6 757 aa12.36□□□□□ -0.43
RPGR-203ENST00000378505 NRKQ7Z2Y5 1582 aa12.36□□□□□ -0.43
RPGR-203ENST00000378505 PALLDQ8WX93 1383 aa12.36□□□□□ -0.43
RPGR-203ENST00000378505 AFPP02771 609 aaKnown RBP12.36□□□□□ -0.43
RPGR-203ENST00000378505 PSMC2P35998 433 aaKnown RBP12.36□□□□□ -0.43
RPGR-203ENST00000378505 SLC16A2P36021 539 aa12.36□□□□□ -0.43
RPGR-203ENST00000378505 CDK8P49336 464 aa12.36□□□□□ -0.43
RPGR-203ENST00000378505 IRX3P78415 501 aaPredicted RBP12.36□□□□□ -0.43
RPGR-203ENST00000378505 PPARDQ03181 441 aa12.36□□□□□ -0.43
RPGR-203ENST00000378505 CC2D2BQ6DHV5 1058 aa12.36□□□□□ -0.43
RPGR-203ENST00000378505 OSBPL5Q9H0X9 879 aaPredicted RBP12.36□□□□□ -0.43
RPGR-203ENST00000378505 JRKLQ9Y4A0 524 aa12.36□□□□□ -0.43
RPGR-203ENST00000378505 NEDD4P46934 1319 aa12.36□□□□□ -0.43
RPGR-203ENST00000378505 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.35□□□□□ -0.43
RPGR-203ENST00000378505 STK10O94804 968 aaKnown RBP12.35□□□□□ -0.43
RPGR-203ENST00000378505 PDE6CP51160 858 aa12.35□□□□□ -0.43
RPGR-203ENST00000378505 ATP11AP98196 1134 aa12.35□□□□□ -0.43
RPGR-203ENST00000378505 LRRC63Q05C16 580 aa12.35□□□□□ -0.43
RPGR-203ENST00000378505 TCP11X2Q5H9J9 407 aa12.35□□□□□ -0.43
RPGR-203ENST00000378505 SGMS1Q86VZ5 419 aa12.35□□□□□ -0.43
RPGR-203ENST00000378505 FAM186BQ8IYM0 893 aa12.35□□□□□ -0.43
RPGR-203ENST00000378505 CSRNP1Q96S65 589 aa12.35□□□□□ -0.43
RPGR-203ENST00000378505 LY9Q9HBG7 655 aa12.35□□□□□ -0.43
RPGR-203ENST00000378505 MFAP3LO75121 409 aa12.35□□□□□ -0.43
RPGR-203ENST00000378505 IFNB1P01574 187 aa12.35□□□□□ -0.43
RPGR-203ENST00000378505 FOXO4P98177 505 aa12.35□□□□□ -0.43
RPGR-203ENST00000378505 PNMA8AQ86V59 439 aaPredicted RBP12.35□□□□□ -0.43
RPGR-203ENST00000378505 STMN2Q93045 179 aa12.35□□□□□ -0.43
RPGR-203ENST00000378505 PARD6BQ9BYG5 372 aa12.35□□□□□ -0.43
RPGR-203ENST00000378505 TRIM6Q9C030 488 aaPredicted RBP12.35□□□□□ -0.43
RPGR-203ENST00000378505 NDST4Q9H3R1 872 aa12.35□□□□□ -0.43
RPGR-203ENST00000378505 NBPF26B4DH59 902 aa12.35□□□□□ -0.43
RPGR-203ENST00000378505 SEC31AO94979 1220 aaKnown RBP12.35□□□□□ -0.43
RPGR-203ENST00000378505 ATP1A2P50993 1020 aa12.35□□□□□ -0.43
RPGR-203ENST00000378505 NBPF10Q6P3W6 841 aaKnown RBP12.35□□□□□ -0.43
RPGR-203ENST00000378505 NBPF15Q8N660 670 aa12.35□□□□□ -0.43
RPGR-203ENST00000378505 GRK7Q8WTQ7 553 aa12.35□□□□□ -0.43
RPGR-203ENST00000378505 EMILIN3Q9NT22 766 aa12.35□□□□□ -0.43
RPGR-203ENST00000378505 RNF40O75150 1001 aa12.35□□□□□ -0.43
RPGR-203ENST00000378505 BMP3P12645 472 aa12.35□□□□□ -0.43
RPGR-203ENST00000378505 GBP1P32455 592 aa12.35□□□□□ -0.43
RPGR-203ENST00000378505 DMP1Q13316 513 aaPredicted RBP12.35□□□□□ -0.43
RPGR-203ENST00000378505 SPICE1Q8N0Z3 855 aa12.35□□□□□ -0.43
RPGR-203ENST00000378505 CCDC89Q8N998 374 aa12.35□□□□□ -0.43
RPGR-203ENST00000378505 CCDC110Q8TBZ0 833 aa12.35□□□□□ -0.43
RPGR-203ENST00000378505 SMCR8Q8TEV9 937 aaPredicted RBP12.35□□□□□ -0.43
RPGR-203ENST00000378505 P3H4Q92791 437 aa12.35□□□□□ -0.43
RPGR-203ENST00000378505 TRPC6Q9Y210 931 aa12.35□□□□□ -0.43
RPGR-203ENST00000378505 TBC1D8O95759 1140 aa12.34□□□□□ -0.43
RPGR-203ENST00000378505 DLATP10515 647 aaKnown RBP12.34□□□□□ -0.43
RPGR-203ENST00000378505 P4HA1P13674 534 aa12.34□□□□□ -0.43
RPGR-203ENST00000378505 PRKG1Q13976 671 aa12.34□□□□□ -0.43
RPGR-203ENST00000378505 NACC1Q96RE7 527 aa12.34□□□□□ -0.43
RPGR-203ENST00000378505 KRT12Q99456 494 aa12.34□□□□□ -0.43
RPGR-203ENST00000378505 PRPF6O94906 941 aaKnown RBP12.34□□□□□ -0.43
RPGR-203ENST00000378505 EIF4A3P38919 411 aaKnown RBP12.34□□□□□ -0.43
RPGR-203ENST00000378505 EPHB4P54760 987 aa12.34□□□□□ -0.43
RPGR-203ENST00000378505 BPIFB4P59827 614 aa12.34□□□□□ -0.43
RPGR-203ENST00000378505 IRX5P78411 483 aaPredicted RBP12.34□□□□□ -0.43
RPGR-203ENST00000378505 ITIH3Q06033 890 aa12.34□□□□□ -0.43
RPGR-203ENST00000378505 PFKFB3Q16875 520 aaPredicted RBP12.34□□□□□ -0.43
RPGR-203ENST00000378505 MAP7D1Q3KQU3 841 aa12.34□□□□□ -0.43
RPGR-203ENST00000378505 SPATS2Q86XZ4 545 aaKnown RBP12.34□□□□□ -0.43
RPGR-203ENST00000378505 ZBTB8OSQ8IWT0 167 aa12.34□□□□□ -0.43
RPGR-203ENST00000378505 CACNA2D3Q8IZS8 1091 aa12.34□□□□□ -0.43
RPGR-203ENST00000378505 ENAHQ8N8S7 591 aaPredicted RBP12.34□□□□□ -0.43
RPGR-203ENST00000378505 VPS37BQ9H9H4 285 aa12.34□□□□□ -0.43
RPGR-203ENST00000378505 PI4KBQ9UBF8 816 aa12.34□□□□□ -0.43
RPGR-203ENST00000378505 SRP68Q9UHB9 627 aaKnown RBP12.34□□□□□ -0.43
RPGR-203ENST00000378505 DAPK3O43293 454 aa12.34□□□□□ -0.43
RPGR-203ENST00000378505 STX2P32856 288 aa12.34□□□□□ -0.43
RPGR-203ENST00000378505 CLCN6P51797 869 aa12.34□□□□□ -0.43
RPGR-203ENST00000378505 EXOSC10Q01780 885 aaKnown RBP12.34□□□□□ -0.43
RPGR-203ENST00000378505 MB21D1Q8N884 522 aa12.34□□□□□ -0.43
RPGR-203ENST00000378505 HINFPQ9BQA5 517 aa12.34□□□□□ -0.43
RPGR-203ENST00000378505 NHEJ1Q9H9Q4 299 aaPredicted RBP12.34□□□□□ -0.43
RPGR-203ENST00000378505 MINPP1Q9UNW1 487 aa12.34□□□□□ -0.43
RPGR-203ENST00000378505 PNMA6FA0A0J9YX94 578 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms