RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 GMNNO75496 209 aa5.39□□□□□ -1.55
PCDH9-201ENST00000377861 FBXO31Q5XUX0 539 aaPredicted RBP5.39□□□□□ -1.55
PCDH9-201ENST00000377861 PRUNE1Q86TP1 453 aa5.39□□□□□ -1.55
PCDH9-201ENST00000377861 CATSPER1Q8NEC5 780 aa5.39□□□□□ -1.55
PCDH9-201ENST00000377861 C8orf4Q9NR00 106 aa5.39□□□□□ -1.55
PCDH9-201ENST00000377861 TNKSO95271 1327 aa5.39□□□□□ -1.55
PCDH9-201ENST00000377861 TECPR2O15040 1411 aa5.39□□□□□ -1.55
PCDH9-201ENST00000377861 PFKFB1P16118 471 aa5.39□□□□□ -1.55
PCDH9-201ENST00000377861 CEP57Q86XR8 500 aa5.39□□□□□ -1.55
PCDH9-201ENST00000377861 TJP3O95049 919 aa5.39□□□□□ -1.55
PCDH9-201ENST00000377861 RPN1P04843 607 aaKnown RBP5.39□□□□□ -1.55
PCDH9-201ENST00000377861 STILQ15468 1287 aa5.39□□□□□ -1.55
PCDH9-201ENST00000377861 NDST4Q9H3R1 872 aa5.39□□□□□ -1.55
PCDH9-201ENST00000377861 RRAGDQ9NQL2 400 aaPredicted RBP5.39□□□□□ -1.55
PCDH9-201ENST00000377861 MRPL11Q9Y3B7 192 aaKnown RBP5.39□□□□□ -1.55
PCDH9-201ENST00000377861 TNFRSF8P28908 595 aa5.39□□□□□ -1.55
PCDH9-201ENST00000377861 CXorf38Q8TB03 319 aa5.39□□□□□ -1.55
PCDH9-201ENST00000377861 TXNDC16Q9P2K2 825 aa5.39□□□□□ -1.55
PCDH9-201ENST00000377861 COPB2P35606 906 aa5.39□□□□□ -1.55
PCDH9-201ENST00000377861 PPP4CP60510 307 aa5.39□□□□□ -1.55
PCDH9-201ENST00000377861 CALCRLQ16602 461 aa5.39□□□□□ -1.55
PCDH9-201ENST00000377861 NUGGCQ68CJ6 796 aa5.39□□□□□ -1.55
PCDH9-201ENST00000377861 ANKIB1Q9P2G1 1089 aa5.39□□□□□ -1.55
PCDH9-201ENST00000377861 MEFVO15553 781 aaPredicted RBP5.39□□□□□ -1.55
PCDH9-201ENST00000377861 CYP21A2P08686 494 aa5.39□□□□□ -1.55
PCDH9-201ENST00000377861 BCAS4Q8TDM0 211 aa5.39□□□□□ -1.55
PCDH9-201ENST00000377861 MYO1FO00160 1098 aa5.39□□□□□ -1.55
PCDH9-201ENST00000377861 WNT8AQ9H1J5 351 aa5.39□□□□□ -1.55
PCDH9-201ENST00000377861 PASKQ96RG2 1323 aa5.39□□□□□ -1.55
PCDH9-201ENST00000377861 FOXD4L6Q3SYB3 417 aaPredicted RBP5.39□□□□□ -1.55
PCDH9-201ENST00000377861 EAPPQ56P03 285 aaPredicted RBP5.39□□□□□ -1.55
PCDH9-201ENST00000377861 FOXD4L3Q6VB84 417 aaPredicted RBP5.39□□□□□ -1.55
PCDH9-201ENST00000377861 C7orf25Q9BPX7 421 aa5.39□□□□□ -1.55
PCDH9-201ENST00000377861 THUMPD2Q9BTF0 503 aaKnown RBP5.39□□□□□ -1.55
PCDH9-201ENST00000377861 CARD9Q9H257 536 aa5.39□□□□□ -1.55
PCDH9-201ENST00000377861 SNX25Q9H3E2 840 aa5.39□□□□□ -1.55
PCDH9-201ENST00000377861 AGTP01019 485 aa5.39□□□□□ -1.55
PCDH9-201ENST00000377861 EXOC3L4Q17RC7 722 aa5.39□□□□□ -1.55
PCDH9-201ENST00000377861 EFR3BQ9Y2G0 817 aa5.39□□□□□ -1.55
PCDH9-201ENST00000377861 CIB2O75838 187 aa5.39□□□□□ -1.55
PCDH9-201ENST00000377861 EIF2AQ9BY44 585 aaKnown RBP5.39□□□□□ -1.55
PCDH9-201ENST00000377861 TRPC6Q9Y210 931 aa5.39□□□□□ -1.55
PCDH9-201ENST00000377861 TOM1O60784 492 aa5.39□□□□□ -1.55
PCDH9-201ENST00000377861 MYL6BP14649 208 aa5.39□□□□□ -1.55
PCDH9-201ENST00000377861 RESTQ13127 1097 aa5.39□□□□□ -1.55
PCDH9-201ENST00000377861 SCINQ9Y6U3 715 aa5.39□□□□□ -1.55
PCDH9-201ENST00000377861 ADD2P35612 726 aa5.39□□□□□ -1.55
PCDH9-201ENST00000377861 CTNNA2P26232 953 aa5.39□□□□□ -1.55
PCDH9-201ENST00000377861 HK2P52789 917 aa5.39□□□□□ -1.55
PCDH9-201ENST00000377861 DRC1Q96MC2 740 aa5.39□□□□□ -1.55
PCDH9-201ENST00000377861 TMX1Q9H3N1 280 aa5.39□□□□□ -1.55
PCDH9-201ENST00000377861 ACTL7BQ9Y614 415 aa5.39□□□□□ -1.55
PCDH9-201ENST00000377861 KCNJ18B7U540 433 aa5.39□□□□□ -1.55
PCDH9-201ENST00000377861 SOX12O15370 315 aa5.39□□□□□ -1.55
PCDH9-201ENST00000377861 ITGA6P23229 1130 aa5.39□□□□□ -1.55
PCDH9-201ENST00000377861 KCNJ12Q14500 433 aa5.39□□□□□ -1.55
PCDH9-201ENST00000377861 HVCN1Q96D96 273 aa5.39□□□□□ -1.55
PCDH9-201ENST00000377861 KDM4CQ9H3R0 1056 aa5.39□□□□□ -1.55
PCDH9-201ENST00000377861 BRDTQ58F21 947 aaPredicted RBP5.39□□□□□ -1.55
PCDH9-201ENST00000377861 CCDC197Q8NCU1 140 aa5.39□□□□□ -1.55
PCDH9-201ENST00000377861 RBM17Q96I25 401 aaKnown RBP5.39□□□□□ -1.55
PCDH9-201ENST00000377861 DNAJC7Q99615 494 aa5.39□□□□□ -1.55
PCDH9-201ENST00000377861 ZSWIM5Q9P217 1185 aa5.39□□□□□ -1.55
PCDH9-201ENST00000377861 MINDY4BA8MYZ0 360 aa5.39□□□□□ -1.55
PCDH9-201ENST00000377861 CCDC22O60826 627 aa5.39□□□□□ -1.55
PCDH9-201ENST00000377861 CNTFP26441 200 aa5.39□□□□□ -1.55
PCDH9-201ENST00000377861 ACAP1Q15027 740 aa5.39□□□□□ -1.55
PCDH9-201ENST00000377861 PXDNLA1KZ92 1463 aa5.39□□□□□ -1.55
PCDH9-201ENST00000377861 DTX3LQ8TDB6 740 aa5.39□□□□□ -1.55
PCDH9-201ENST00000377861 ATRIPQ8WXE1 791 aa5.39□□□□□ -1.55
PCDH9-201ENST00000377861 OLFM3Q96PB7 478 aa5.39□□□□□ -1.55
PCDH9-201ENST00000377861 OSBPL9Q96SU4 736 aa5.39□□□□□ -1.55
PCDH9-201ENST00000377861 COPS2P61201 443 aa5.38□□□□□ -1.55
PCDH9-201ENST00000377861 STAT4Q14765 748 aa5.38□□□□□ -1.55
PCDH9-201ENST00000377861 PFKFB3Q16875 520 aaPredicted RBP5.38□□□□□ -1.55
PCDH9-201ENST00000377861 CYFIP1Q7L576 1253 aa5.38□□□□□ -1.55
PCDH9-201ENST00000377861 PHKG2P15735 406 aa5.38□□□□□ -1.55
PCDH9-201ENST00000377861 NDUFA8P51970 172 aa5.38□□□□□ -1.55
PCDH9-201ENST00000377861 PTPN12Q05209 780 aaKnown RBP5.38□□□□□ -1.55
PCDH9-201ENST00000377861 TRPV6Q9H1D0 765 aa5.38□□□□□ -1.55
PCDH9-201ENST00000377861 GPATCH11Q8N954 259 aa5.38□□□□□ -1.55
PCDH9-201ENST00000377861 ADD3Q9UEY8 706 aaKnown RBP5.38□□□□□ -1.55
PCDH9-201ENST00000377861 ARMC2Q8NEN0 867 aa5.38□□□□□ -1.55
PCDH9-201ENST00000377861 RPGRQ92834 1020 aaKnown RBP5.38□□□□□ -1.55
PCDH9-201ENST00000377861 USP28Q96RU2 1077 aa5.38□□□□□ -1.55
PCDH9-201ENST00000377861 PTK2Q05397 1052 aa5.38□□□□□ -1.55
PCDH9-201ENST00000377861 TDRD12Q587J7 1177 aaKnown RBP5.38□□□□□ -1.55
PCDH9-201ENST00000377861 FRA10AC1Q70Z53 315 aa5.38□□□□□ -1.55
PCDH9-201ENST00000377861 NECAB1Q8N987 351 aa5.38□□□□□ -1.55
PCDH9-201ENST00000377861 TCHPQ9BT92 498 aa5.38□□□□□ -1.55
PCDH9-201ENST00000377861 PMM2O15305 246 aa5.38□□□□□ -1.55
PCDH9-201ENST00000377861 RANBP1P43487 201 aa5.38□□□□□ -1.55
PCDH9-201ENST00000377861 CENPUQ71F23 418 aa5.38□□□□□ -1.55
PCDH9-201ENST00000377861 PDE4DQ08499 809 aa5.38□□□□□ -1.55
PCDH9-201ENST00000377861 PI4KBQ9UBF8 816 aa5.38□□□□□ -1.55
PCDH9-201ENST00000377861 GAS2O43903 313 aaKnown RBP5.38□□□□□ -1.55
PCDH9-201ENST00000377861 GRM1Q13255 1194 aa5.38□□□□□ -1.55
PCDH9-201ENST00000377861 RIPK1Q13546 671 aa5.38□□□□□ -1.55
PCDH9-201ENST00000377861 MORC3Q14149 939 aa5.38□□□□□ -1.55
PCDH9-201ENST00000377861 PCBP1Q15365 356 aaKnown RBP eCLIP5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms