RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 A0A1W2PP64 1363 aa13.53□□□□□ -0.24
VPS13A-204ENST00000376634 RPN1P04843 607 aaKnown RBP13.53□□□□□ -0.24
VPS13A-204ENST00000376634 PPARAQ07869 468 aa13.53□□□□□ -0.24
VPS13A-204ENST00000376634 BTG4Q9NY30 223 aa13.53□□□□□ -0.24
VPS13A-204ENST00000376634 TIMM10P62072 90 aa13.53□□□□□ -0.24
VPS13A-204ENST00000376634 BLIDQ8IZY5 108 aa13.53□□□□□ -0.24
VPS13A-204ENST00000376634 EDC4Q6P2E9 1401 aaKnown RBP13.53□□□□□ -0.24
VPS13A-204ENST00000376634 EFCAB8A8MWE9 144 aa13.53□□□□□ -0.24
VPS13A-204ENST00000376634 ANGPTL8Q6UXH0 198 aa13.53□□□□□ -0.24
VPS13A-204ENST00000376634 SCOCQ9UIL1 159 aa13.53□□□□□ -0.24
VPS13A-204ENST00000376634 AKT3Q9Y243 479 aa13.53□□□□□ -0.24
VPS13A-204ENST00000376634 METTL14Q9HCE5 456 aaKnown RBP13.53□□□□□ -0.24
VPS13A-204ENST00000376634 CCDC87Q9NVE4 849 aa13.53□□□□□ -0.24
VPS13A-204ENST00000376634 WDR64B1ANS9 1081 aa13.53□□□□□ -0.24
VPS13A-204ENST00000376634 POC1B-GALNT4F8VUJ3 575 aa13.53□□□□□ -0.24
VPS13A-204ENST00000376634 OR52Z1P0C646 297 aa13.53□□□□□ -0.24
VPS13A-204ENST00000376634 CROCC2H7BZ55 1655 aa13.53□□□□□ -0.24
VPS13A-204ENST00000376634 KRT33BQ14525 404 aa13.52□□□□□ -0.24
VPS13A-204ENST00000376634 ZNF654Q8IZM8 581 aa13.52□□□□□ -0.24
VPS13A-204ENST00000376634 KCTD6Q8NC69 237 aa13.52□□□□□ -0.24
VPS13A-204ENST00000376634 POLR3CQ9BUI4 534 aaPredicted RBP13.52□□□□□ -0.24
VPS13A-204ENST00000376634 SSH2Q76I76 1423 aa13.52□□□□□ -0.24
VPS13A-204ENST00000376634 XPOTO43592 962 aaKnown RBP13.52□□□□□ -0.24
VPS13A-204ENST00000376634 ABCD1P33897 745 aa13.52□□□□□ -0.24
VPS13A-204ENST00000376634 KIAA0556O60303 1618 aa13.52□□□□□ -0.24
VPS13A-204ENST00000376634 ATXN8OSP0DMR3 200 aa13.52□□□□□ -0.24
VPS13A-204ENST00000376634 EXOC3L4Q17RC7 722 aa13.52□□□□□ -0.24
VPS13A-204ENST00000376634 DNAAF3Q8N9W5 541 aa13.52□□□□□ -0.24
VPS13A-204ENST00000376634 SEPT9Q9UHD8 586 aaPredicted RBP13.52□□□□□ -0.24
VPS13A-204ENST00000376634 COL17A1Q9UMD9 1497 aaPredicted RBP13.52□□□□□ -0.24
VPS13A-204ENST00000376634 ACTN1P12814 892 aa13.52□□□□□ -0.25
VPS13A-204ENST00000376634 GUCY2DQ02846 1103 aa13.52□□□□□ -0.25
VPS13A-204ENST00000376634 SNX1Q13596 522 aa13.52□□□□□ -0.25
VPS13A-204ENST00000376634 MYSM1Q5VVJ2 828 aa13.52□□□□□ -0.25
VPS13A-204ENST00000376634 SUFUQ9UMX1 484 aa13.52□□□□□ -0.25
VPS13A-204ENST00000376634 TCP1P17987 556 aaKnown RBP13.52□□□□□ -0.25
VPS13A-204ENST00000376634 GNL1P36915 607 aaPredicted RBP13.52□□□□□ -0.25
VPS13A-204ENST00000376634 SRRM1Q8IYB3 904 aaKnown RBP13.52□□□□□ -0.25
VPS13A-204ENST00000376634 SNX14Q9Y5W7 946 aa13.52□□□□□ -0.25
VPS13A-204ENST00000376634 SBNO1A3KN83 1393 aa13.52□□□□□ -0.25
VPS13A-204ENST00000376634 CACTINQ8WUQ7 758 aaKnown RBP13.52□□□□□ -0.25
VPS13A-204ENST00000376634 GCNAQ96QF7 691 aa13.52□□□□□ -0.25
VPS13A-204ENST00000376634 GCNT4Q9P109 453 aa13.52□□□□□ -0.25
VPS13A-204ENST00000376634 KIAA1468Q9P260 1216 aa13.52□□□□□ -0.25
VPS13A-204ENST00000376634 ZBBXA8MT70 800 aa13.52□□□□□ -0.25
VPS13A-204ENST00000376634 CTSWP56202 376 aa13.52□□□□□ -0.25
VPS13A-204ENST00000376634 LRRC23Q53EV4 343 aaPredicted RBP13.52□□□□□ -0.25
VPS13A-204ENST00000376634 FAM186BQ8IYM0 893 aa13.52□□□□□ -0.25
VPS13A-204ENST00000376634 DPH5Q9H2P9 285 aa13.52□□□□□ -0.25
VPS13A-204ENST00000376634 APBA1Q02410 837 aa13.51□□□□□ -0.25
VPS13A-204ENST00000376634 PTK2Q05397 1052 aa13.51□□□□□ -0.25
VPS13A-204ENST00000376634 E7EWF7 191 aa13.51□□□□□ -0.25
VPS13A-204ENST00000376634 METTL23Q86XA0 190 aa13.51□□□□□ -0.25
VPS13A-204ENST00000376634 MAML1Q92585 1016 aa13.51□□□□□ -0.25
VPS13A-204ENST00000376634 PGBD1Q96JS3 809 aa13.51□□□□□ -0.25
VPS13A-204ENST00000376634 SERPINI1Q99574 410 aa13.51□□□□□ -0.25
VPS13A-204ENST00000376634 TEKT3Q9BXF9 490 aa13.51□□□□□ -0.25
VPS13A-204ENST00000376634 NFKBIAP25963 317 aa13.51□□□□□ -0.25
VPS13A-204ENST00000376634 ZNF445P59923 1031 aa13.51□□□□□ -0.25
VPS13A-204ENST00000376634 ARMCX5Q6P1M9 558 aa13.51□□□□□ -0.25
VPS13A-204ENST00000376634 C16orf87Q6PH81 154 aa13.51□□□□□ -0.25
VPS13A-204ENST00000376634 TRMT10CQ7L0Y3 403 aaKnown RBP13.51□□□□□ -0.25
VPS13A-204ENST00000376634 CCDC127Q96BQ5 260 aa13.51□□□□□ -0.25
VPS13A-204ENST00000376634 FAM81BQ96LP2 452 aa13.51□□□□□ -0.25
VPS13A-204ENST00000376634 SLC8A2Q9UPR5 921 aa13.51□□□□□ -0.25
VPS13A-204ENST00000376634 GPATCH8Q9UKJ3 1502 aaKnown RBP13.51□□□□□ -0.25
VPS13A-204ENST00000376634 MAP3K7O43318 606 aa13.51□□□□□ -0.25
VPS13A-204ENST00000376634 PPP1R2P3Q6NXS1 205 aa13.51□□□□□ -0.25
VPS13A-204ENST00000376634 LAMC1P11047 1609 aa13.51□□□□□ -0.25
VPS13A-204ENST00000376634 ALAS1P13196 640 aa13.51□□□□□ -0.25
VPS13A-204ENST00000376634 MYO1EQ12965 1108 aa13.51□□□□□ -0.25
VPS13A-204ENST00000376634 TFAP4Q01664 338 aa13.51□□□□□ -0.25
VPS13A-204ENST00000376634 EHHADHQ08426 723 aa13.51□□□□□ -0.25
VPS13A-204ENST00000376634 MED7O43513 233 aa13.51□□□□□ -0.25
VPS13A-204ENST00000376634 ACBD5Q5T8D3 534 aaPredicted RBP13.51□□□□□ -0.25
VPS13A-204ENST00000376634 RETREG2Q8NC44 543 aa13.51□□□□□ -0.25
VPS13A-204ENST00000376634 ATP6V0A1Q93050 837 aa13.51□□□□□ -0.25
VPS13A-204ENST00000376634 CNOT10Q9H9A5 744 aaKnown RBP13.51□□□□□ -0.25
VPS13A-204ENST00000376634 INTS9Q9NV88 658 aaKnown RBP13.51□□□□□ -0.25
VPS13A-204ENST00000376634 ANGPTL2Q9UKU9 493 aa13.51□□□□□ -0.25
VPS13A-204ENST00000376634 PPP2R2CQ9Y2T4 447 aa13.51□□□□□ -0.25
VPS13A-204ENST00000376634 FBXW4P57775 412 aa13.51□□□□□ -0.25
VPS13A-204ENST00000376634 STAMQ92783 540 aa13.51□□□□□ -0.25
VPS13A-204ENST00000376634 SGSM2O43147 1006 aa13.5□□□□□ -0.25
VPS13A-204ENST00000376634 TAB3Q8N5C8 712 aaPredicted RBP13.5□□□□□ -0.25
VPS13A-204ENST00000376634 KIFC3Q9BVG8 833 aa13.5□□□□□ -0.25
VPS13A-204ENST00000376634 ATG16L1Q676U5 607 aa13.5□□□□□ -0.25
VPS13A-204ENST00000376634 USP40Q9NVE5 1235 aa13.5□□□□□ -0.25
VPS13A-204ENST00000376634 CNTRLQ7Z7A1 2325 aa13.5□□□□□ -0.25
VPS13A-204ENST00000376634 VAMP4O75379 141 aa13.5□□□□□ -0.25
VPS13A-204ENST00000376634 TAF11Q15544 211 aa13.5□□□□□ -0.25
VPS13A-204ENST00000376634 GLE1Q53GS7 698 aaKnown RBP13.5□□□□□ -0.25
VPS13A-204ENST00000376634 KRT80Q6KB66 452 aa13.5□□□□□ -0.25
VPS13A-204ENST00000376634 ANLNQ9NQW6 1124 aa13.5□□□□□ -0.25
VPS13A-204ENST00000376634 CHEK2O96017 543 aa13.5□□□□□ -0.25
VPS13A-204ENST00000376634 PFKFB1P16118 471 aa13.5□□□□□ -0.25
VPS13A-204ENST00000376634 KCNA4P22459 653 aa13.5□□□□□ -0.25
VPS13A-204ENST00000376634 ANXA13P27216 316 aa13.5□□□□□ -0.25
VPS13A-204ENST00000376634 MFAP3P55082 362 aa13.5□□□□□ -0.25
VPS13A-204ENST00000376634 POLA2Q14181 598 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms