RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 PLCG2P16885 1265 aa11.9□□□□□ -0.5
ABCF1-202ENST00000376545 ASIC1P78348 528 aa11.9□□□□□ -0.5
ABCF1-202ENST00000376545 CRY2Q49AN0 593 aa11.9□□□□□ -0.5
ABCF1-202ENST00000376545 POTEDQ86YR6 584 aa11.9□□□□□ -0.5
ABCF1-202ENST00000376545 NEK11Q8NG66 645 aa11.9□□□□□ -0.5
ABCF1-202ENST00000376545 PIGSQ96S52 555 aa11.9□□□□□ -0.5
ABCF1-202ENST00000376545 ZNHIT6Q9NWK9 470 aaKnown RBP11.9□□□□□ -0.5
ABCF1-202ENST00000376545 IGKV6D-41A0A0C4DH26 115 aa11.9□□□□□ -0.5
ABCF1-202ENST00000376545 RPS6KA5O75582 802 aa11.9□□□□□ -0.5
ABCF1-202ENST00000376545 PRLRP16471 622 aa11.9□□□□□ -0.5
ABCF1-202ENST00000376545 MCM3P25205 808 aa11.9□□□□□ -0.5
ABCF1-202ENST00000376545 GPSM2P81274 684 aa11.9□□□□□ -0.5
ABCF1-202ENST00000376545 ITIH3Q06033 890 aa11.9□□□□□ -0.5
ABCF1-202ENST00000376545 MCM6Q14566 821 aa11.9□□□□□ -0.5
ABCF1-202ENST00000376545 VWA3BQ502W6 1294 aa11.9□□□□□ -0.5
ABCF1-202ENST00000376545 GUF1Q8N442 669 aaKnown RBP11.9□□□□□ -0.5
ABCF1-202ENST00000376545 FAM71BQ8TC56 605 aa11.9□□□□□ -0.5
ABCF1-202ENST00000376545 CALML4Q96GE6 196 aa11.9□□□□□ -0.5
ABCF1-202ENST00000376545 TSGA10Q9BZW7 698 aa11.9□□□□□ -0.5
ABCF1-202ENST00000376545 MYMKA6NI61 221 aa11.89□□□□□ -0.51
ABCF1-202ENST00000376545 NUTM2BA6NNL0 878 aaPredicted RBP11.89□□□□□ -0.51
ABCF1-202ENST00000376545 NUTM2EB1AL46 878 aaPredicted RBP11.89□□□□□ -0.51
ABCF1-202ENST00000376545 PDHBP11177 359 aa11.89□□□□□ -0.51
ABCF1-202ENST00000376545 CKAP4Q07065 602 aaKnown RBP11.89□□□□□ -0.51
ABCF1-202ENST00000376545 TMEM119Q4V9L6 283 aa11.89□□□□□ -0.51
ABCF1-202ENST00000376545 ARHGAP27Q6ZUM4 889 aa11.89□□□□□ -0.51
ABCF1-202ENST00000376545 SV2BQ7L1I2 683 aa11.89□□□□□ -0.51
ABCF1-202ENST00000376545 REXO1Q8N1G1 1221 aaKnown RBP11.89□□□□□ -0.51
ABCF1-202ENST00000376545 MED4Q9NPJ6 270 aa11.89□□□□□ -0.51
ABCF1-202ENST00000376545 UBR3Q6ZT12 1888 aa11.89□□□□□ -0.51
ABCF1-202ENST00000376545 N4BP1O75113 896 aaKnown RBP11.89□□□□□ -0.51
ABCF1-202ENST00000376545 MTIF2P46199 727 aaKnown RBP11.89□□□□□ -0.51
ABCF1-202ENST00000376545 GYS2P54840 703 aa11.89□□□□□ -0.51
ABCF1-202ENST00000376545 GABPAQ06546 454 aa11.89□□□□□ -0.51
ABCF1-202ENST00000376545 ARHGAP20Q9P2F6 1191 aa11.89□□□□□ -0.51
ABCF1-202ENST00000376545 SEC63Q9UGP8 760 aaKnown RBP11.89□□□□□ -0.51
ABCF1-202ENST00000376545 USP17L5A8MUK1 530 aa11.89□□□□□ -0.51
ABCF1-202ENST00000376545 ATP2B4P23634 1241 aa11.89□□□□□ -0.51
ABCF1-202ENST00000376545 CLK2P49760 499 aaKnown RBP11.89□□□□□ -0.51
ABCF1-202ENST00000376545 LRRC63Q05C16 580 aa11.89□□□□□ -0.51
ABCF1-202ENST00000376545 PSMD2Q13200 908 aa11.89□□□□□ -0.51
ABCF1-202ENST00000376545 SOGA3Q5TF21 947 aa11.89□□□□□ -0.51
ABCF1-202ENST00000376545 KIAA1328Q86T90 577 aa11.89□□□□□ -0.51
ABCF1-202ENST00000376545 TEX11Q8IYF3 940 aa11.89□□□□□ -0.51
ABCF1-202ENST00000376545 BIN2Q9UBW5 565 aaPredicted RBP11.89□□□□□ -0.51
ABCF1-202ENST00000376545 CCNL1Q9UK58 526 aaPredicted RBP11.89□□□□□ -0.51
ABCF1-202ENST00000376545 MYH7BA7E2Y1 1941 aa11.88□□□□□ -0.51
ABCF1-202ENST00000376545 PJA2O43164 708 aa11.88□□□□□ -0.51
ABCF1-202ENST00000376545 SRGAP2O75044 1071 aa11.88□□□□□ -0.51
ABCF1-202ENST00000376545 ASTE1Q2TB18 679 aaPredicted RBP11.88□□□□□ -0.51
ABCF1-202ENST00000376545 FKBP15Q5T1M5 1219 aa11.88□□□□□ -0.51
ABCF1-202ENST00000376545 PPP4R3AQ6IN85 833 aa11.88□□□□□ -0.51
ABCF1-202ENST00000376545 PPP1R18Q6NYC8 613 aa11.88□□□□□ -0.51
ABCF1-202ENST00000376545 LRRC55Q6ZSA7 311 aa11.88□□□□□ -0.51
ABCF1-202ENST00000376545 FNBP4Q8N3X1 1017 aaPredicted RBP11.88□□□□□ -0.51
ABCF1-202ENST00000376545 GOLGA5Q8TBA6 731 aa11.88□□□□□ -0.51
ABCF1-202ENST00000376545 LARP4BQ92615 738 aaKnown RBP11.88□□□□□ -0.51
ABCF1-202ENST00000376545 RUBCNQ92622 972 aa11.88□□□□□ -0.51
ABCF1-202ENST00000376545 RAD54LQ92698 747 aa11.88□□□□□ -0.51
ABCF1-202ENST00000376545 EDEM3Q9BZQ6 932 aa11.88□□□□□ -0.51
ABCF1-202ENST00000376545 NDST4Q9H3R1 872 aa11.88□□□□□ -0.51
ABCF1-202ENST00000376545 TMEM260Q9NX78 707 aa11.88□□□□□ -0.51
ABCF1-202ENST00000376545 DUSP10Q9Y6W6 482 aa11.88□□□□□ -0.51
ABCF1-202ENST00000376545 PDE2AO00408 941 aaPredicted RBP11.88□□□□□ -0.51
ABCF1-202ENST00000376545 PES1O00541 588 aaKnown RBP11.88□□□□□ -0.51
ABCF1-202ENST00000376545 SLC37A4O43826 429 aa11.88□□□□□ -0.51
ABCF1-202ENST00000376545 CALCRLQ16602 461 aa11.88□□□□□ -0.51
ABCF1-202ENST00000376545 MAN2A1Q16706 1144 aa11.88□□□□□ -0.51
ABCF1-202ENST00000376545 CREG2Q8IUH2 290 aa11.88□□□□□ -0.51
ABCF1-202ENST00000376545 HPS3Q969F9 1004 aa11.88□□□□□ -0.51
ABCF1-202ENST00000376545 SH2D4AQ9H788 454 aa11.88□□□□□ -0.51
ABCF1-202ENST00000376545 SLC39A2Q9NP94 309 aa11.88□□□□□ -0.51
ABCF1-202ENST00000376545 MTMR4Q9NYA4 1195 aa11.88□□□□□ -0.51
ABCF1-202ENST00000376545 LRWD1Q9UFC0 647 aa11.88□□□□□ -0.51
ABCF1-202ENST00000376545 EPHB6O15197 1021 aa11.87□□□□□ -0.51
ABCF1-202ENST00000376545 SYF2O95926 243 aaKnown RBP11.87□□□□□ -0.51
ABCF1-202ENST00000376545 ZCWPW2Q504Y3 356 aa11.87□□□□□ -0.51
ABCF1-202ENST00000376545 ASPRV1Q53RT3 343 aa11.87□□□□□ -0.51
ABCF1-202ENST00000376545 MMGT1Q8N4V1 131 aa11.87□□□□□ -0.51
ABCF1-202ENST00000376545 TRIM58Q8NG06 486 aa11.87□□□□□ -0.51
ABCF1-202ENST00000376545 BAP1Q92560 729 aa11.87□□□□□ -0.51
ABCF1-202ENST00000376545 GPR101Q96P66 508 aaPredicted RBP11.87□□□□□ -0.51
ABCF1-202ENST00000376545 JRKLQ9Y4A0 524 aa11.87□□□□□ -0.51
ABCF1-202ENST00000376545 ACTN2P35609 894 aa11.87□□□□□ -0.51
ABCF1-202ENST00000376545 TXKP42681 527 aa11.87□□□□□ -0.51
ABCF1-202ENST00000376545 KIF5AQ12840 1032 aa11.87□□□□□ -0.51
ABCF1-202ENST00000376545 HYIQ5T013 277 aa11.87□□□□□ -0.51
ABCF1-202ENST00000376545 CCDC84Q86UT8 332 aaPredicted RBP11.87□□□□□ -0.51
ABCF1-202ENST00000376545 SLF2Q8IX21 1173 aa11.87□□□□□ -0.51
ABCF1-202ENST00000376545 SECISBP2LQ93073 1101 aaKnown RBP11.87□□□□□ -0.51
ABCF1-202ENST00000376545 RIC8AQ9NPQ8 531 aa11.87□□□□□ -0.51
ABCF1-202ENST00000376545 VPS18Q9P253 973 aa11.87□□□□□ -0.51
ABCF1-202ENST00000376545 SNX12Q9UMY4 172 aa11.87□□□□□ -0.51
ABCF1-202ENST00000376545 PRPF6O94906 941 aaKnown RBP11.86□□□□□ -0.51
ABCF1-202ENST00000376545 FGFR1OPO95684 399 aaKnown RBP11.86□□□□□ -0.51
ABCF1-202ENST00000376545 PLEKP08567 350 aaPredicted RBP11.86□□□□□ -0.51
ABCF1-202ENST00000376545 ZSCAN26Q16670 478 aa11.86□□□□□ -0.51
ABCF1-202ENST00000376545 MAP9Q49MG5 647 aa11.86□□□□□ -0.51
ABCF1-202ENST00000376545 PRR5LQ6MZQ0 368 aa11.86□□□□□ -0.51
ABCF1-202ENST00000376545 CNBD1Q8NA66 436 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms