RNA–Protein interactions for RNA: ENST00000376406.7

MDC1-201, Transcript of mediator of DNA damage checkpoint 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene MDC1, Length 7,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-201ENST00000376406 SASH1O94885 1247 aa12.03□□□□□ -0.48
MDC1-201ENST00000376406 POLGP54098 1239 aaPredicted RBP12.03□□□□□ -0.48
MDC1-201ENST00000376406 U2AF1L4Q8WU68 220 aaKnown RBP12.03□□□□□ -0.48
MDC1-201ENST00000376406 CNOT6LQ96LI5 555 aaKnown RBP12.03□□□□□ -0.48
MDC1-201ENST00000376406 TCP1P17987 556 aaKnown RBP12.03□□□□□ -0.48
MDC1-201ENST00000376406 DPCR1Q3MIW9 517 aa12.03□□□□□ -0.48
MDC1-201ENST00000376406 ARMCX3Q9UH62 379 aaPredicted RBP12.03□□□□□ -0.48
MDC1-201ENST00000376406 RWDD2AQ9UIY3 292 aa12.03□□□□□ -0.48
MDC1-201ENST00000376406 EPN1Q9Y6I3 576 aaPredicted RBP12.03□□□□□ -0.48
MDC1-201ENST00000376406 PNPLA6Q8IY17 1366 aa12.03□□□□□ -0.48
MDC1-201ENST00000376406 GRK7Q8WTQ7 553 aa12.03□□□□□ -0.48
MDC1-201ENST00000376406 USP31Q70CQ4 1352 aa12.03□□□□□ -0.48
MDC1-201ENST00000376406 RAB3IL1Q8TBN0 382 aa12.03□□□□□ -0.48
MDC1-201ENST00000376406 NRBP1Q9UHY1 535 aa12.03□□□□□ -0.48
MDC1-201ENST00000376406 BZW2Q9Y6E2 419 aaKnown RBP12.03□□□□□ -0.48
MDC1-201ENST00000376406 GBP1P32455 592 aa12.03□□□□□ -0.48
MDC1-201ENST00000376406 AOC3Q16853 763 aa12.03□□□□□ -0.48
MDC1-201ENST00000376406 ARHGAP44Q17R89 818 aa12.03□□□□□ -0.48
MDC1-201ENST00000376406 DCUN1D2Q6PH85 259 aa12.03□□□□□ -0.48
MDC1-201ENST00000376406 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.03□□□□□ -0.48
MDC1-201ENST00000376406 DDX41Q9UJV9 622 aaKnown RBP12.03□□□□□ -0.48
MDC1-201ENST00000376406 PRPF3O43395 683 aaKnown RBP12.03□□□□□ -0.48
MDC1-201ENST00000376406 GOLGA8HP0CJ92 632 aa12.03□□□□□ -0.48
MDC1-201ENST00000376406 UIMC1Q96RL1 719 aa12.03□□□□□ -0.48
MDC1-201ENST00000376406 SLC39A2Q9NP94 309 aa12.03□□□□□ -0.48
MDC1-201ENST00000376406 MED4Q9NPJ6 270 aa12.03□□□□□ -0.48
MDC1-201ENST00000376406 COL4A3BPQ9Y5P4 624 aa12.03□□□□□ -0.48
MDC1-201ENST00000376406 LARGE1O95461 756 aa12.02□□□□□ -0.48
MDC1-201ENST00000376406 MAP7D1Q3KQU3 841 aa12.02□□□□□ -0.48
MDC1-201ENST00000376406 OSBP2Q969R2 916 aa12.02□□□□□ -0.48
MDC1-201ENST00000376406 ITIH3Q06033 890 aa12.02□□□□□ -0.48
MDC1-201ENST00000376406 RBL2Q08999 1139 aa12.02□□□□□ -0.48
MDC1-201ENST00000376406 COA7Q96BR5 231 aa12.02□□□□□ -0.48
MDC1-201ENST00000376406 PCDHA5Q9Y5H7 936 aa12.02□□□□□ -0.48
MDC1-201ENST00000376406 SRPRBQ9Y5M8 271 aaKnown RBP12.02□□□□□ -0.48
MDC1-201ENST00000376406 KCNK3O14649 394 aa12.02□□□□□ -0.49
MDC1-201ENST00000376406 CYP2J2P51589 502 aa12.02□□□□□ -0.49
MDC1-201ENST00000376406 SLC16A10Q8TF71 515 aa12.02□□□□□ -0.49
MDC1-201ENST00000376406 BMP3P12645 472 aa12.02□□□□□ -0.49
MDC1-201ENST00000376406 CASP14P31944 242 aa12.02□□□□□ -0.49
MDC1-201ENST00000376406 FAM102BQ5T8I3 360 aa12.02□□□□□ -0.49
MDC1-201ENST00000376406 RABGGTAQ92696 567 aa12.02□□□□□ -0.49
MDC1-201ENST00000376406 STMN2Q93045 179 aa12.02□□□□□ -0.49
MDC1-201ENST00000376406 PTPRMP28827 1452 aa12.02□□□□□ -0.49
MDC1-201ENST00000376406 CPS1P31327 1500 aa12.02□□□□□ -0.49
MDC1-201ENST00000376406 PXDNLA1KZ92 1463 aa12.02□□□□□ -0.49
MDC1-201ENST00000376406 KRIT1O00522 736 aa12.02□□□□□ -0.49
MDC1-201ENST00000376406 POLR2BP30876 1174 aaKnown RBP12.02□□□□□ -0.49
MDC1-201ENST00000376406 LIG4P49917 911 aa12.02□□□□□ -0.49
MDC1-201ENST00000376406 HOXC10Q9NYD6 342 aa12.02□□□□□ -0.49
MDC1-201ENST00000376406 ATP8B1O43520 1251 aa12.02□□□□□ -0.49
MDC1-201ENST00000376406 ADAM9Q13443 819 aa12.02□□□□□ -0.49
MDC1-201ENST00000376406 TMEM179Q6ZVK1 233 aa12.02□□□□□ -0.49
MDC1-201ENST00000376406 FAM71BQ8TC56 605 aa12.02□□□□□ -0.49
MDC1-201ENST00000376406 TUBGCP2Q9BSJ2 902 aa12.02□□□□□ -0.49
MDC1-201ENST00000376406 WDR19Q8NEZ3 1342 aa12.01□□□□□ -0.49
MDC1-201ENST00000376406 TYW5A2RUC4 315 aaKnown RBP12.01□□□□□ -0.49
MDC1-201ENST00000376406 POLR2FP61218 127 aaKnown RBP12.01□□□□□ -0.49
MDC1-201ENST00000376406 LCORLQ8N3X6 602 aa12.01□□□□□ -0.49
MDC1-201ENST00000376406 ZNF341Q9BYN7 854 aa12.01□□□□□ -0.49
MDC1-201ENST00000376406 USTQ9Y2C2 406 aa12.01□□□□□ -0.49
MDC1-201ENST00000376406 PCDHA1Q9Y5I3 950 aa12.01□□□□□ -0.49
MDC1-201ENST00000376406 PPFIA4O75335 1185 aa12.01□□□□□ -0.49
MDC1-201ENST00000376406 TTC16Q8NEE8 873 aa12.01□□□□□ -0.49
MDC1-201ENST00000376406 LARP4BQ92615 738 aaKnown RBP12.01□□□□□ -0.49
MDC1-201ENST00000376406 KIF1AQ12756 1690 aa12.01□□□□□ -0.49
MDC1-201ENST00000376406 K7ENM7 598 aa12.01□□□□□ -0.49
MDC1-201ENST00000376406 BUB1O43683 1085 aa12.01□□□□□ -0.49
MDC1-201ENST00000376406 CTNNA1P35221 906 aaKnown RBP12.01□□□□□ -0.49
MDC1-201ENST00000376406 LIFRP42702 1097 aa12.01□□□□□ -0.49
MDC1-201ENST00000376406 SRGAP1Q7Z6B7 1085 aa12.01□□□□□ -0.49
MDC1-201ENST00000376406 ANAPC4Q9UJX5 808 aa12.01□□□□□ -0.49
MDC1-201ENST00000376406 PDZD4Q76G19 769 aaPredicted RBP12.01□□□□□ -0.49
MDC1-201ENST00000376406 SPATS2Q86XZ4 545 aaKnown RBP12.01□□□□□ -0.49
MDC1-201ENST00000376406 GTF3C2Q8WUA4 911 aaPredicted RBP12.01□□□□□ -0.49
MDC1-201ENST00000376406 RUNDC3BQ96NL0 473 aa12.01□□□□□ -0.49
MDC1-201ENST00000376406 C1orf167Q5SNV9 1468 aa12.01□□□□□ -0.49
MDC1-201ENST00000376406 IFNAR1P17181 557 aa12.01□□□□□ -0.49
MDC1-201ENST00000376406 HAUS1Q96CS2 278 aa12.01□□□□□ -0.49
MDC1-201ENST00000376406 TBC1D31Q96DN5 1066 aa12.01□□□□□ -0.49
MDC1-201ENST00000376406 PSMD1Q99460 953 aa12.01□□□□□ -0.49
MDC1-201ENST00000376406 CDHR2Q9BYE9 1310 aa12.01□□□□□ -0.49
MDC1-201ENST00000376406 H7C1W4 665 aa12.01□□□□□ -0.49
MDC1-201ENST00000376406 PDE6CP51160 858 aa12.01□□□□□ -0.49
MDC1-201ENST00000376406 CCDC89Q8N998 374 aa12.01□□□□□ -0.49
MDC1-201ENST00000376406 ATF5Q9Y2D1 282 aaPredicted RBP12.01□□□□□ -0.49
MDC1-201ENST00000376406 ATP8B3O60423 1300 aa12□□□□□ -0.49
MDC1-201ENST00000376406 TNNI1P19237 187 aa12□□□□□ -0.49
MDC1-201ENST00000376406 FASTKD5Q7L8L6 764 aaKnown RBP12□□□□□ -0.49
MDC1-201ENST00000376406 PLA2G4DQ86XP0 818 aa12□□□□□ -0.49
MDC1-201ENST00000376406 CACTINQ8WUQ7 758 aaKnown RBP12□□□□□ -0.49
MDC1-201ENST00000376406 SH3GLB2Q9NR46 395 aa12□□□□□ -0.49
MDC1-201ENST00000376406 SLFN14P0C7P3 912 aa12□□□□□ -0.49
MDC1-201ENST00000376406 CUL4BQ13620 913 aa12□□□□□ -0.49
MDC1-201ENST00000376406 SURF1Q15526 300 aa12□□□□□ -0.49
MDC1-201ENST00000376406 LGSNQ5TDP6 509 aa12□□□□□ -0.49
MDC1-201ENST00000376406 THAP9Q9H5L6 903 aa12□□□□□ -0.49
MDC1-201ENST00000376406 PTPREP23469 700 aa12□□□□□ -0.49
MDC1-201ENST00000376406 ARL1P40616 181 aaPredicted RBP12□□□□□ -0.49
MDC1-201ENST00000376406 RESP18Q5W5W9 173 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms