RNA–Protein interactions for RNA: ENST00000376230.7

ZNF550-203, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 3,719 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-203ENST00000376230 NUDT12Q9BQG2 462 aa11.18□□□□□ -0.62
ZNF550-203ENST00000376230 SLC37A4O43826 429 aa11.17□□□□□ -0.62
ZNF550-203ENST00000376230 CYLC1P35663 651 aaPredicted RBP11.17□□□□□ -0.62
ZNF550-203ENST00000376230 CYP2J2P51589 502 aa11.17□□□□□ -0.62
ZNF550-203ENST00000376230 PPP2R5BQ15173 497 aa11.17□□□□□ -0.62
ZNF550-203ENST00000376230 ARHGAP44Q17R89 818 aa11.17□□□□□ -0.62
ZNF550-203ENST00000376230 TCP11X2Q5H9J9 407 aa11.17□□□□□ -0.62
ZNF550-203ENST00000376230 CYP26C1Q6V0L0 522 aa11.17□□□□□ -0.62
ZNF550-203ENST00000376230 BPIFA3Q9BQP9 254 aa11.17□□□□□ -0.62
ZNF550-203ENST00000376230 FUT8Q9BYC5 575 aa11.17□□□□□ -0.62
ZNF550-203ENST00000376230 HSD3B7Q9H2F3 369 aa11.17□□□□□ -0.62
ZNF550-203ENST00000376230 FAM204AQ9H8W3 233 aa11.17□□□□□ -0.62
ZNF550-203ENST00000376230 MAD2L2Q9UI95 211 aa11.17□□□□□ -0.62
ZNF550-203ENST00000376230 STK36Q9NRP7 1315 aa11.17□□□□□ -0.62
ZNF550-203ENST00000376230 USO1O60763 962 aaKnown RBP11.17□□□□□ -0.62
ZNF550-203ENST00000376230 PLEKP08567 350 aaPredicted RBP11.17□□□□□ -0.62
ZNF550-203ENST00000376230 SLC7A5Q01650 507 aa11.17□□□□□ -0.62
ZNF550-203ENST00000376230 CTTNQ14247 550 aaKnown RBP11.17□□□□□ -0.62
ZNF550-203ENST00000376230 IL17AQ16552 155 aa11.17□□□□□ -0.62
ZNF550-203ENST00000376230 TMEM132AQ24JP5 1023 aa11.17□□□□□ -0.62
ZNF550-203ENST00000376230 NAA35Q5VZE5 725 aa11.17□□□□□ -0.62
ZNF550-203ENST00000376230 ANKRD40Q6AI12 368 aa11.17□□□□□ -0.62
ZNF550-203ENST00000376230 LARP4BQ92615 738 aaKnown RBP11.17□□□□□ -0.62
ZNF550-203ENST00000376230 NAPGQ99747 312 aaPredicted RBP11.17□□□□□ -0.62
ZNF550-203ENST00000376230 ZNF277Q9NRM2 450 aaPredicted RBP11.17□□□□□ -0.62
ZNF550-203ENST00000376230 ABCB4P21439 1286 aa11.17□□□□□ -0.62
ZNF550-203ENST00000376230 LONP1P36776 959 aaKnown RBP11.17□□□□□ -0.62
ZNF550-203ENST00000376230 RASSF7Q02833 373 aa11.17□□□□□ -0.62
ZNF550-203ENST00000376230 EN1Q05925 392 aaPredicted RBP11.17□□□□□ -0.62
ZNF550-203ENST00000376230 ZNF658Q5TYW1 1059 aaPredicted RBP11.17□□□□□ -0.62
ZNF550-203ENST00000376230 DDX12PQ92771 950 aa11.17□□□□□ -0.62
ZNF550-203ENST00000376230 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.17□□□□□ -0.621e-6■■■■■ 34
ZNF550-203ENST00000376230 CDC23Q9UJX2 597 aa11.17□□□□□ -0.62
ZNF550-203ENST00000376230 PACSIN2Q9UNF0 486 aaPredicted RBP11.17□□□□□ -0.62
ZNF550-203ENST00000376230 H0YHG0 523 aa11.16□□□□□ -0.62
ZNF550-203ENST00000376230 ZNF185O15231 689 aa11.16□□□□□ -0.62
ZNF550-203ENST00000376230 PRPF6O94906 941 aaKnown RBP11.16□□□□□ -0.62
ZNF550-203ENST00000376230 TTLL1O95922 423 aa11.16□□□□□ -0.62
ZNF550-203ENST00000376230 ACTN2P35609 894 aa11.16□□□□□ -0.62
ZNF550-203ENST00000376230 GJC1P36383 396 aa11.16□□□□□ -0.62
ZNF550-203ENST00000376230 MAGEA1P43355 309 aa11.16□□□□□ -0.62
ZNF550-203ENST00000376230 CRKP46108 304 aa11.16□□□□□ -0.62
ZNF550-203ENST00000376230 DDR1Q08345 913 aa11.16□□□□□ -0.62
ZNF550-203ENST00000376230 NOA1Q8NC60 698 aaKnown RBP11.16□□□□□ -0.62
ZNF550-203ENST00000376230 PANK4Q9NVE7 773 aa11.16□□□□□ -0.62
ZNF550-203ENST00000376230 BARHL2Q9NY43 387 aa11.16□□□□□ -0.62
ZNF550-203ENST00000376230 FZD1Q9UP38 647 aa11.16□□□□□ -0.62
ZNF550-203ENST00000376230 SMIM23A6NLE4 172 aa11.16□□□□□ -0.62
ZNF550-203ENST00000376230 SEMA3EO15041 775 aa11.16□□□□□ -0.62
ZNF550-203ENST00000376230 BBOX1O75936 387 aa11.16□□□□□ -0.62
ZNF550-203ENST00000376230 ERCC5P28715 1186 aaPredicted RBP11.16□□□□□ -0.62
ZNF550-203ENST00000376230 GTF2A1P52655 376 aaPredicted RBP11.16□□□□□ -0.62
ZNF550-203ENST00000376230 MKRN4PQ13434 485 aaPredicted RBP11.16□□□□□ -0.62
ZNF550-203ENST00000376230 E2F4Q16254 413 aa11.16□□□□□ -0.62
ZNF550-203ENST00000376230 ABCB5Q2M3G0 1257 aa11.16□□□□□ -0.62
ZNF550-203ENST00000376230 PHLDB2Q86SQ0 1253 aa11.16□□□□□ -0.62
ZNF550-203ENST00000376230 KLHL7Q8IXQ5 586 aa11.16□□□□□ -0.62
ZNF550-203ENST00000376230 MYCT1Q8N699 235 aa11.16□□□□□ -0.62
ZNF550-203ENST00000376230 TBC1D22AQ8WUA7 517 aa11.16□□□□□ -0.62
ZNF550-203ENST00000376230 LSM14BQ9BX40 385 aaKnown RBP11.16□□□□□ -0.62
ZNF550-203ENST00000376230 GOLPH3Q9H4A6 298 aa11.16□□□□□ -0.62
ZNF550-203ENST00000376230 RGL1Q9NZL6 768 aa11.16□□□□□ -0.62
ZNF550-203ENST00000376230 CCDC151A5D8V7 595 aa11.16□□□□□ -0.62
ZNF550-203ENST00000376230 RNF225M0QZC1 329 aaPredicted RBP11.16□□□□□ -0.62
ZNF550-203ENST00000376230 NCK2O43639 380 aa11.16□□□□□ -0.62
ZNF550-203ENST00000376230 KRT86O43790 486 aa11.16□□□□□ -0.62
ZNF550-203ENST00000376230 MFAP3LO75121 409 aa11.16□□□□□ -0.62
ZNF550-203ENST00000376230 CASP8Q14790 479 aa11.16□□□□□ -0.62
ZNF550-203ENST00000376230 VPS72Q15906 364 aa11.16□□□□□ -0.62
ZNF550-203ENST00000376230 ELMO3Q96BJ8 720 aa11.16□□□□□ -0.62
ZNF550-203ENST00000376230 MLXIPQ9HAP2 919 aa11.16□□□□□ -0.62
ZNF550-203ENST00000376230 EHD2Q9NZN4 543 aa11.16□□□□□ -0.62
ZNF550-203ENST00000376230 HYOU1Q9Y4L1 999 aa11.16□□□□□ -0.62
ZNF550-203ENST00000376230 ADGRG1Q9Y653 693 aa11.16□□□□□ -0.62
ZNF550-203ENST00000376230 WDR19Q8NEZ3 1342 aa11.15□□□□□ -0.62
ZNF550-203ENST00000376230 PPP1R3GB7ZBB8 358 aa11.15□□□□□ -0.62
ZNF550-203ENST00000376230 STXBP3O00186 592 aa11.15□□□□□ -0.62
ZNF550-203ENST00000376230 FAM13AO94988 1023 aa11.15□□□□□ -0.62
ZNF550-203ENST00000376230 GYPCP04921 128 aa11.15□□□□□ -0.62
ZNF550-203ENST00000376230 ALAS1P13196 640 aa11.15□□□□□ -0.62
ZNF550-203ENST00000376230 GRM4Q14833 912 aa11.15□□□□□ -0.62
ZNF550-203ENST00000376230 CDC37Q16543 378 aaPredicted RBP11.15□□□□□ -0.62
ZNF550-203ENST00000376230 QRICH1Q2TAL8 776 aa11.15□□□□□ -0.62
ZNF550-203ENST00000376230 CNNM4Q6P4Q7 775 aa11.15□□□□□ -0.62
ZNF550-203ENST00000376230 P2RX5Q93086 422 aa11.15□□□□□ -0.62
ZNF550-203ENST00000376230 IFIH1Q9BYX4 1025 aaKnown RBP11.15□□□□□ -0.62
ZNF550-203ENST00000376230 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.15□□□□□ -0.62
ZNF550-203ENST00000376230 ORC4O43929 436 aa11.15□□□□□ -0.62
ZNF550-203ENST00000376230 MOCS3O95396 460 aa11.15□□□□□ -0.62
ZNF550-203ENST00000376230 FAM26FQ5R3K3 315 aa11.15□□□□□ -0.62
ZNF550-203ENST00000376230 CDC42EP5Q6NZY7 148 aa11.15□□□□□ -0.62
ZNF550-203ENST00000376230 TMTC1Q8IUR5 882 aa11.15□□□□□ -0.62
ZNF550-203ENST00000376230 IPO4Q8TEX9 1081 aaKnown RBP11.15□□□□□ -0.62
ZNF550-203ENST00000376230 PCIF1Q9H4Z3 704 aa11.15□□□□□ -0.62
ZNF550-203ENST00000376230 CHD2O14647 1828 aaKnown RBP11.15□□□□□ -0.63
ZNF550-203ENST00000376230 ZBTB7AO95365 584 aa11.14□□□□□ -0.63
ZNF550-203ENST00000376230 FTCDO95954 541 aa11.14□□□□□ -0.63
ZNF550-203ENST00000376230 CDR1P51861 262 aa11.14□□□□□ -0.63
ZNF550-203ENST00000376230 DLGAP5Q15398 846 aa11.14□□□□□ -0.63
ZNF550-203ENST00000376230 GOLGA5Q8TBA6 731 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms