RNA–Protein interactions for RNA: ENST00000376177.6

DDX39B-201, Transcript of DExD-box helicase 39B, humanhuman

TSL 5 BASIC

Gene DDX39B, Length 1,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-201ENST00000376177 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.96□□□□□ -0.33
DDX39B-201ENST00000376177 AMOTL1Q8IY63 956 aa12.96□□□□□ -0.33
DDX39B-201ENST00000376177 MORC4Q8TE76 937 aa12.96□□□□□ -0.33
DDX39B-201ENST00000376177 BOLA2Q9H3K6 86 aa12.96□□□□□ -0.33
DDX39B-201ENST00000376177 VTA1Q9NP79 307 aa12.96□□□□□ -0.33
DDX39B-201ENST00000376177 ISY1Q9ULR0 285 aaKnown RBP12.96□□□□□ -0.33
DDX39B-201ENST00000376177 MINDY4BA8MYZ0 360 aa12.95□□□□□ -0.34
DDX39B-201ENST00000376177 ST18O60284 1047 aa12.95□□□□□ -0.34
DDX39B-201ENST00000376177 RLBP1P12271 317 aa12.95□□□□□ -0.34
DDX39B-201ENST00000376177 BMP3P12645 472 aa12.95□□□□□ -0.34
DDX39B-201ENST00000376177 CLUL1Q15846 466 aa12.95□□□□□ -0.34
DDX39B-201ENST00000376177 TCEAL5Q5H9L2 206 aa12.95□□□□□ -0.34
DDX39B-201ENST00000376177 GDF6Q6KF10 455 aaPredicted RBP12.95□□□□□ -0.34
DDX39B-201ENST00000376177 NSMFQ6X4W1 530 aa12.95□□□□□ -0.34
DDX39B-201ENST00000376177 FBXO22Q8NEZ5 403 aa12.95□□□□□ -0.34
DDX39B-201ENST00000376177 RAD9AQ99638 391 aa12.95□□□□□ -0.34
DDX39B-201ENST00000376177 PAG1Q9NWQ8 432 aa12.95□□□□□ -0.34
DDX39B-201ENST00000376177 ZFHX2Q9C0A1 2572 aaPredicted RBP12.95□□□□□ -0.34
DDX39B-201ENST00000376177 CACNA1AO00555 2505 aa12.94□□□□□ -0.34
DDX39B-201ENST00000376177 IPO8O15397 1037 aaKnown RBP12.94□□□□□ -0.34
DDX39B-201ENST00000376177 IGHDP01880 384 aa12.94□□□□□ -0.34
DDX39B-201ENST00000376177 LTBRP36941 435 aa12.94□□□□□ -0.34
DDX39B-201ENST00000376177 CPT1AP50416 773 aa12.94□□□□□ -0.34
DDX39B-201ENST00000376177 BFSP2Q13515 415 aa12.94□□□□□ -0.34
DDX39B-201ENST00000376177 PTGISQ16647 500 aa12.94□□□□□ -0.34
DDX39B-201ENST00000376177 NFRKBQ6P4R8 1299 aa12.94□□□□□ -0.34
DDX39B-201ENST00000376177 GMCL1P1Q8NEA9 526 aa12.94□□□□□ -0.34
DDX39B-201ENST00000376177 RHPN1Q8TCX5 695 aa12.94□□□□□ -0.34
DDX39B-201ENST00000376177 WNT8BQ93098 351 aa12.94□□□□□ -0.34
DDX39B-201ENST00000376177 MKL1Q969V6 931 aa12.94□□□□□ -0.34
DDX39B-201ENST00000376177 MRPL38Q96DV4 380 aaKnown RBP12.94□□□□□ -0.34
DDX39B-201ENST00000376177 TBC1D32Q96NH3 1257 aa12.94□□□□□ -0.34
DDX39B-201ENST00000376177 MKNK2Q9HBH9 465 aa12.94□□□□□ -0.34
DDX39B-201ENST00000376177 ALG13Q9NP73 1137 aaKnown RBP12.94□□□□□ -0.34
DDX39B-201ENST00000376177 MTMR4Q9NYA4 1195 aa12.94□□□□□ -0.34
DDX39B-201ENST00000376177 RALGAPA2Q2PPJ7 1873 aa12.94□□□□□ -0.34
DDX39B-201ENST00000376177 ZDBF2Q9HCK1 2354 aa12.94□□□□□ -0.34
DDX39B-201ENST00000376177 ALDH5A1P51649 535 aaPredicted RBP12.93□□□□□ -0.34
DDX39B-201ENST00000376177 DLX2Q07687 328 aaPredicted RBP12.93□□□□□ -0.34
DDX39B-201ENST00000376177 BAATQ14032 418 aaPredicted RBP12.93□□□□□ -0.34
DDX39B-201ENST00000376177 ZKSCAN2Q63HK3 967 aa12.93□□□□□ -0.34
DDX39B-201ENST00000376177 CNKSR3Q6P9H4 555 aa12.93□□□□□ -0.34
DDX39B-201ENST00000376177 KCTD1Q719H9 257 aa12.93□□□□□ -0.34
DDX39B-201ENST00000376177 LRRC8DQ7L1W4 858 aa12.93□□□□□ -0.34
DDX39B-201ENST00000376177 ADHFE1Q8IWW8 467 aa12.93□□□□□ -0.34
DDX39B-201ENST00000376177 GPHNQ9NQX3 736 aaPredicted RBP12.93□□□□□ -0.34
DDX39B-201ENST00000376177 ARPP21Q9UBL0 812 aaPredicted RBP12.93□□□□□ -0.34
DDX39B-201ENST00000376177 NOD1Q9Y239 953 aa12.93□□□□□ -0.34
DDX39B-201ENST00000376177 RBM47A0AV96 593 aaKnown RBP12.93□□□□□ -0.34
DDX39B-201ENST00000376177 GSG1L2A8MUP6 293 aa12.93□□□□□ -0.34
DDX39B-201ENST00000376177 ARIH2O95376 493 aa12.93□□□□□ -0.34
DDX39B-201ENST00000376177 CXCL10P02778 98 aa12.93□□□□□ -0.34
DDX39B-201ENST00000376177 PTMSP20962 102 aa12.93□□□□□ -0.34
DDX39B-201ENST00000376177 STAT2P52630 851 aa12.93□□□□□ -0.34
DDX39B-201ENST00000376177 HDAC1Q13547 482 aaPredicted RBP12.93□□□□□ -0.34
DDX39B-201ENST00000376177 MBTPS1Q14703 1052 aa12.93□□□□□ -0.34
DDX39B-201ENST00000376177 TRAF7Q6Q0C0 670 aa12.93□□□□□ -0.34
DDX39B-201ENST00000376177 RNF135Q8IUD6 432 aa12.93□□□□□ -0.34
DDX39B-201ENST00000376177 BANK1Q8NDB2 785 aa12.93□□□□□ -0.34
DDX39B-201ENST00000376177 PABPC5Q96DU9 382 aaKnown RBP12.93□□□□□ -0.34
DDX39B-201ENST00000376177 MFSD14AQ96MC6 490 aa12.93□□□□□ -0.34
DDX39B-201ENST00000376177 EPB41L4AQ9HCS5 686 aaPredicted RBP12.93□□□□□ -0.34
DDX39B-201ENST00000376177 CLDND1Q9NY35 253 aa12.93□□□□□ -0.34
DDX39B-201ENST00000376177 COL4A6Q14031 1691 aa12.93□□□□□ -0.34
DDX39B-201ENST00000376177 WDR87Q6ZQQ6 2873 aa12.93□□□□□ -0.34
DDX39B-201ENST00000376177 MYH7BA7E2Y1 1941 aa12.92□□□□□ -0.34
DDX39B-201ENST00000376177 KIAA1217Q5T5P2 1943 aa12.92□□□□□ -0.34
DDX39B-201ENST00000376177 NFIBO00712 420 aa12.92□□□□□ -0.34
DDX39B-201ENST00000376177 GFRA3O60609 400 aa12.92□□□□□ -0.34
DDX39B-201ENST00000376177 CKBP12277 381 aa12.92□□□□□ -0.34
DDX39B-201ENST00000376177 SELPP16109 830 aa12.92□□□□□ -0.34
DDX39B-201ENST00000376177 MCCP23508 829 aa12.92□□□□□ -0.34
DDX39B-201ENST00000376177 IKQ13123 557 aaPredicted RBP12.92□□□□□ -0.34
DDX39B-201ENST00000376177 COL19A1Q14993 1142 aa12.92□□□□□ -0.34
DDX39B-201ENST00000376177 PUS10Q3MIT2 529 aaKnown RBP12.92□□□□□ -0.34
DDX39B-201ENST00000376177 EPC2Q52LR7 807 aa12.92□□□□□ -0.34
DDX39B-201ENST00000376177 SBK1Q52WX2 424 aa12.92□□□□□ -0.34
DDX39B-201ENST00000376177 HERC4Q5GLZ8 1057 aaPredicted RBP12.92□□□□□ -0.34
DDX39B-201ENST00000376177 SLC30A10Q6XR72 485 aa12.92□□□□□ -0.34
DDX39B-201ENST00000376177 AFAP1L1Q8TED9 768 aa12.92□□□□□ -0.34
DDX39B-201ENST00000376177 STAG1Q8WVM7 1258 aa12.92□□□□□ -0.34
DDX39B-201ENST00000376177 STRBPQ96SI9 672 aaKnown RBP12.92□□□□□ -0.34
DDX39B-201ENST00000376177 PRR12Q9ULL5 1215 aa12.92□□□□□ -0.34
DDX39B-201ENST00000376177 DDX19BQ9UMR2 479 aa12.92□□□□□ -0.34
DDX39B-201ENST00000376177 A6NJR5 290 aa12.91□□□□□ -0.34
DDX39B-201ENST00000376177 TTLL1O95922 423 aa12.91□□□□□ -0.34
DDX39B-201ENST00000376177 GTF2F1P35269 517 aaKnown RBP eCLIP12.91□□□□□ -0.34
DDX39B-201ENST00000376177 LRRFIP1Q32MZ4 808 aaKnown RBP12.91□□□□□ -0.34
DDX39B-201ENST00000376177 TKFCQ3LXA3 575 aa12.91□□□□□ -0.34
DDX39B-201ENST00000376177 RPAINQ86UA6 219 aa12.91□□□□□ -0.34
DDX39B-201ENST00000376177 ITPRIPQ8IWB1 547 aa12.91□□□□□ -0.34
DDX39B-201ENST00000376177 RPAP2Q8IXW5 612 aaPredicted RBP12.91□□□□□ -0.34
DDX39B-201ENST00000376177 PRKAG3Q9UGI9 489 aa12.91□□□□□ -0.34
DDX39B-201ENST00000376177 CCPG1Q9ULG6 757 aa12.91□□□□□ -0.34
DDX39B-201ENST00000376177 ABHD14A-ACY1A0A1B0GW23 586 aa12.9□□□□□ -0.34
DDX39B-201ENST00000376177 LGR5O75473 907 aa12.9□□□□□ -0.34
DDX39B-201ENST00000376177 PTPN5P54829 565 aa12.9□□□□□ -0.34
DDX39B-201ENST00000376177 VCPP55072 806 aaKnown RBP12.9□□□□□ -0.34
DDX39B-201ENST00000376177 PTPN11Q06124 597 aaPredicted RBP12.9□□□□□ -0.34
DDX39B-201ENST00000376177 MKRN4PQ13434 485 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms