RNA–Protein interactions for RNA: ENST00000375642.6

C6orf48-207, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C6orf48, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-207ENST00000375642 DDX49Q9Y6V7 483 aaKnown RBP20.1■□□□□ 0.81
C6orf48-207ENST00000375642 hCG_1984214I3L0E3 225 aa20.09■□□□□ 0.81
C6orf48-207ENST00000375642 NAPAP54920 295 aa20.09■□□□□ 0.81
C6orf48-207ENST00000375642 PFKFB3Q16875 520 aaPredicted RBP20.09■□□□□ 0.81
C6orf48-207ENST00000375642 ARHGEF16Q5VV41 709 aa20.09■□□□□ 0.81
C6orf48-207ENST00000375642 TRIM22Q8IYM9 498 aa20.09■□□□□ 0.81
C6orf48-207ENST00000375642 ZNF713Q8N859 430 aaPredicted RBP20.09■□□□□ 0.81
C6orf48-207ENST00000375642 SHISA4Q96DD7 197 aa20.09■□□□□ 0.81
C6orf48-207ENST00000375642 HTATIP2Q9BUP3 242 aa20.09■□□□□ 0.81
C6orf48-207ENST00000375642 RNF26Q9BY78 433 aaPredicted RBP20.09■□□□□ 0.81
C6orf48-207ENST00000375642 OGDHLQ9ULD0 1010 aa20.09■□□□□ 0.81
C6orf48-207ENST00000375642 PPFIA3O75145 1194 aa20.08■□□□□ 0.81
C6orf48-207ENST00000375642 SCG2P13521 617 aa20.08■□□□□ 0.81
C6orf48-207ENST00000375642 AKR1A1P14550 325 aa20.08■□□□□ 0.81
C6orf48-207ENST00000375642 EDNRBP24530 442 aa20.08■□□□□ 0.81
C6orf48-207ENST00000375642 SCRN1Q12765 414 aa20.08■□□□□ 0.81
C6orf48-207ENST00000375642 RABEP1Q15276 862 aa20.08■□□□□ 0.81
C6orf48-207ENST00000375642 PPP1R18Q6NYC8 613 aa20.08■□□□□ 0.81
C6orf48-207ENST00000375642 EEPD1Q7L9B9 569 aa20.08■□□□□ 0.81
C6orf48-207ENST00000375642 FCHSD1Q86WN1 690 aa20.08■□□□□ 0.81
C6orf48-207ENST00000375642 SMARCC2Q8TAQ2 1214 aa20.08■□□□□ 0.81
C6orf48-207ENST00000375642 TBC1D32Q96NH3 1257 aa20.08■□□□□ 0.81
C6orf48-207ENST00000375642 IWS1Q96ST2 819 aa20.08■□□□□ 0.81
C6orf48-207ENST00000375642 KATNBL1Q9H079 304 aa20.08■□□□□ 0.81
C6orf48-207ENST00000375642 VTA1Q9NP79 307 aa20.08■□□□□ 0.81
C6orf48-207ENST00000375642 BARHL2Q9NY43 387 aa20.08■□□□□ 0.81
C6orf48-207ENST00000375642 STXBP3O00186 592 aa20.07■□□□□ 0.8
C6orf48-207ENST00000375642 PIK3CDO00329 1044 aa20.07■□□□□ 0.8
C6orf48-207ENST00000375642 CDKL5O76039 1030 aa20.07■□□□□ 0.8
C6orf48-207ENST00000375642 RARBP10826 455 aa20.07■□□□□ 0.8
C6orf48-207ENST00000375642 EIF2AK2P19525 551 aaKnown RBP20.07■□□□□ 0.8
C6orf48-207ENST00000375642 SSRP1Q08945 709 aaKnown RBP20.07■□□□□ 0.8
C6orf48-207ENST00000375642 CCDC144BQ3MJ40 725 aa20.07■□□□□ 0.8
C6orf48-207ENST00000375642 ANO1Q5XXA6 986 aa20.07■□□□□ 0.8
C6orf48-207ENST00000375642 USP17L6PQ6QN14 398 aa20.07■□□□□ 0.8
C6orf48-207ENST00000375642 FBXO16Q8IX29 292 aaPredicted RBP20.07■□□□□ 0.8
C6orf48-207ENST00000375642 PXMP2Q9NR77 195 aa20.07■□□□□ 0.8
C6orf48-207ENST00000375642 MEIS2O14770 477 aa20.06■□□□□ 0.8
C6orf48-207ENST00000375642 PKN1Q16512 942 aa20.06■□□□□ 0.8
C6orf48-207ENST00000375642 ME3Q16798 604 aa20.06■□□□□ 0.8
C6orf48-207ENST00000375642 TYW1BQ6NUM6 668 aa20.06■□□□□ 0.8
C6orf48-207ENST00000375642 ANKLE1Q8NAG6 615 aa20.06■□□□□ 0.8
C6orf48-207ENST00000375642 LIMCH1Q9UPQ0 1083 aa20.06■□□□□ 0.8
C6orf48-207ENST00000375642 NR2E3Q9Y5X4 410 aa20.06■□□□□ 0.8
C6orf48-207ENST00000375642 SMCO2A6NFE2 343 aa20.05■□□□□ 0.8
C6orf48-207ENST00000375642 NR3C2P08235 984 aa20.05■□□□□ 0.8
C6orf48-207ENST00000375642 STXBP2Q15833 593 aa20.05■□□□□ 0.8
C6orf48-207ENST00000375642 IQSEC1Q6DN90 963 aa20.05■□□□□ 0.8
C6orf48-207ENST00000375642 TEX2Q8IWB9 1127 aa20.05■□□□□ 0.8
C6orf48-207ENST00000375642 NECAB1Q8N987 351 aa20.05■□□□□ 0.8
C6orf48-207ENST00000375642 ARRDC4Q8NCT1 418 aa20.05■□□□□ 0.8
C6orf48-207ENST00000375642 IL27Q8NEV9 243 aa20.05■□□□□ 0.8
C6orf48-207ENST00000375642 CCDC12Q8WUD4 166 aaPredicted RBP20.05■□□□□ 0.8
C6orf48-207ENST00000375642 GLT8D2Q9H1C3 349 aa20.05■□□□□ 0.8
C6orf48-207ENST00000375642 RIC8AQ9NPQ8 531 aa20.05■□□□□ 0.8
C6orf48-207ENST00000375642 XPNPEP3Q9NQH7 507 aa20.05■□□□□ 0.8
C6orf48-207ENST00000375642 DUSP11O75319 330 aaKnown RBP20.04■□□□□ 0.8
C6orf48-207ENST00000375642 FARP2O94887 1054 aaPredicted RBP20.04■□□□□ 0.8
C6orf48-207ENST00000375642 ADCYAP1R1P41586 468 aa20.04■□□□□ 0.8
C6orf48-207ENST00000375642 ADCY7P51828 1080 aa20.04■□□□□ 0.8
C6orf48-207ENST00000375642 TNFAIP2Q03169 654 aa20.04■□□□□ 0.8
C6orf48-207ENST00000375642 TAPT1Q6NXT6 567 aa20.04■□□□□ 0.8
C6orf48-207ENST00000375642 GTF3C6Q969F1 213 aa20.04■□□□□ 0.8
C6orf48-207ENST00000375642 PDCD2LQ9BRP1 358 aa20.04■□□□□ 0.8
C6orf48-207ENST00000375642 PDGFCQ9NRA1 345 aa20.04■□□□□ 0.8
C6orf48-207ENST00000375642 LCTP09848 1927 aa20.04■□□□□ 0.8
C6orf48-207ENST00000375642 ST18O60284 1047 aa20.03■□□□□ 0.8
C6orf48-207ENST00000375642 EIF3JO75822 258 aaKnown RBP20.03■□□□□ 0.8
C6orf48-207ENST00000375642 DEXIO95424 95 aa20.03■□□□□ 0.8
C6orf48-207ENST00000375642 LARGE1O95461 756 aa20.03■□□□□ 0.8
C6orf48-207ENST00000375642 MYCNP04198 464 aaPredicted RBP20.03■□□□□ 0.8
C6orf48-207ENST00000375642 MYCLP12524 364 aaPredicted RBP20.03■□□□□ 0.8
C6orf48-207ENST00000375642 UBE2SQ16763 222 aa20.03■□□□□ 0.8
C6orf48-207ENST00000375642 LENG1Q96BZ8 264 aaPredicted RBP20.03■□□□□ 0.8
C6orf48-207ENST00000375642 SZT2Q5T011 3432 aa20.03■□□□□ 0.8
C6orf48-207ENST00000375642 MCM3APO60318 1980 aa20.03■□□□□ 0.8
C6orf48-207ENST00000375642 RBM47A0AV96 593 aaKnown RBP20.02■□□□□ 0.8
C6orf48-207ENST00000375642 SPDYE3A6NKU9 549 aa20.02■□□□□ 0.8
C6orf48-207ENST00000375642 CCND2P30279 289 aa20.02■□□□□ 0.8
C6orf48-207ENST00000375642 PGM5Q15124 567 aa20.02■□□□□ 0.8
C6orf48-207ENST00000375642 VSIG10LQ86VR7 867 aa20.02■□□□□ 0.8
C6orf48-207ENST00000375642 SCFD2Q8WU76 684 aa20.02■□□□□ 0.8
C6orf48-207ENST00000375642 ZSCAN31Q96LW9 406 aaPredicted RBP20.02■□□□□ 0.8
C6orf48-207ENST00000375642 WDR11Q9BZH6 1224 aa20.02■□□□□ 0.8
C6orf48-207ENST00000375642 C6orf50Q9HD87 102 aa20.02■□□□□ 0.8
C6orf48-207ENST00000375642 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.01■□□□□ 0.79
C6orf48-207ENST00000375642 ESYT2A0FGR8 921 aa20.01■□□□□ 0.79
C6orf48-207ENST00000375642 PGK1P00558 417 aa20.01■□□□□ 0.79
C6orf48-207ENST00000375642 SMPD1P17405 629 aa20.01■□□□□ 0.79
C6orf48-207ENST00000375642 NECAB2Q7Z6G3 386 aa20.01■□□□□ 0.79
C6orf48-207ENST00000375642 UBE2Q1Q7Z7E8 422 aa20.01■□□□□ 0.79
C6orf48-207ENST00000375642 RNF180Q86T96 592 aa20.01■□□□□ 0.79
C6orf48-207ENST00000375642 CCDC148Q8NFR7 591 aa20.01■□□□□ 0.79
C6orf48-207ENST00000375642 IL31RAQ8NI17 732 aa20.01■□□□□ 0.79
C6orf48-207ENST00000375642 PAWRQ96IZ0 340 aaKnown RBP20.01■□□□□ 0.79
C6orf48-207ENST00000375642 ZMYND12Q9H0C1 365 aa20.01■□□□□ 0.79
C6orf48-207ENST00000375642 SPC25Q9HBM1 224 aa20.01■□□□□ 0.79
C6orf48-207ENST00000375642 SH3GLB2Q9NR46 395 aa20.01■□□□□ 0.79
C6orf48-207ENST00000375642 VPS54Q9P1Q0 977 aa20.01■□□□□ 0.79
C6orf48-207ENST00000375642 FRMPD4Q14CM0 1322 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms