RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 ITIH3Q06033 890 aa12.61□□□□□ -0.39
PTCH1-203ENST00000375274 CUL4BQ13620 913 aa12.61□□□□□ -0.39
PTCH1-203ENST00000375274 CCDC13Q8IYE1 715 aa12.61□□□□□ -0.39
PTCH1-203ENST00000375274 CCDC127Q96BQ5 260 aa12.61□□□□□ -0.39
PTCH1-203ENST00000375274 VCXQ9H320 206 aa12.61□□□□□ -0.39
PTCH1-203ENST00000375274 ADAMTS1Q9UHI8 967 aa12.61□□□□□ -0.39
PTCH1-203ENST00000375274 RABGAP1Q9Y3P9 1069 aa12.61□□□□□ -0.39
PTCH1-203ENST00000375274 UNC13BO14795 1591 aa12.61□□□□□ -0.39
PTCH1-203ENST00000375274 ANKRD65E5RJM6 399 aa12.61□□□□□ -0.39
PTCH1-203ENST00000375274 CTNND1O60716 968 aaKnown RBP12.61□□□□□ -0.39
PTCH1-203ENST00000375274 FOSP01100 380 aaPredicted RBP12.61□□□□□ -0.39
PTCH1-203ENST00000375274 E4F1Q66K89 784 aaPredicted RBP12.61□□□□□ -0.39
PTCH1-203ENST00000375274 SHC4Q6S5L8 630 aa12.61□□□□□ -0.39
PTCH1-203ENST00000375274 STOX1Q6ZVD7 989 aa12.61□□□□□ -0.39
PTCH1-203ENST00000375274 K7ENM7 598 aa12.61□□□□□ -0.39
PTCH1-203ENST00000375274 TEX33O43247 280 aa12.61□□□□□ -0.39
PTCH1-203ENST00000375274 AFPP02771 609 aaKnown RBP12.61□□□□□ -0.39
PTCH1-203ENST00000375274 NR1D1P20393 614 aa12.61□□□□□ -0.39
PTCH1-203ENST00000375274 CRKLP46109 303 aaKnown RBP12.61□□□□□ -0.39
PTCH1-203ENST00000375274 PLTPP55058 493 aa12.61□□□□□ -0.39
PTCH1-203ENST00000375274 DHX9Q08211 1270 aaKnown RBP12.61□□□□□ -0.39
PTCH1-203ENST00000375274 MESDQ14696 234 aa12.61□□□□□ -0.39
PTCH1-203ENST00000375274 SNCBQ16143 134 aa12.61□□□□□ -0.39
PTCH1-203ENST00000375274 ASPRV1Q53RT3 343 aa12.61□□□□□ -0.39
PTCH1-203ENST00000375274 ODR4Q5SWX8 454 aa12.61□□□□□ -0.39
PTCH1-203ENST00000375274 CTAGE3PQ8IX95 158 aa12.61□□□□□ -0.39
PTCH1-203ENST00000375274 WHAMMQ8TF30 809 aa12.61□□□□□ -0.39
PTCH1-203ENST00000375274 LGALS16A8MUM7 142 aa12.6□□□□□ -0.39
PTCH1-203ENST00000375274 SUN1O94901 812 aa12.6□□□□□ -0.39
PTCH1-203ENST00000375274 GCFC2P16383 781 aaKnown RBP12.6□□□□□ -0.39
PTCH1-203ENST00000375274 STAG1Q8WVM7 1258 aa12.6□□□□□ -0.39
PTCH1-203ENST00000375274 UBAP1LF5GYI3 381 aa12.6□□□□□ -0.39
PTCH1-203ENST00000375274 CDC27P30260 824 aa12.6□□□□□ -0.39
PTCH1-203ENST00000375274 CACNB1Q02641 598 aaPredicted RBP12.6□□□□□ -0.39
PTCH1-203ENST00000375274 FAM98CQ17RN3 349 aaKnown RBP12.6□□□□□ -0.39
PTCH1-203ENST00000375274 SLFN13Q68D06 897 aa12.6□□□□□ -0.39
PTCH1-203ENST00000375274 VCX3BQ9H321 246 aa12.6□□□□□ -0.39
PTCH1-203ENST00000375274 ANKARQ7Z5J8 1434 aa12.6□□□□□ -0.39
PTCH1-203ENST00000375274 CYP27B1O15528 508 aa12.6□□□□□ -0.39
PTCH1-203ENST00000375274 ATP2B4P23634 1241 aa12.6□□□□□ -0.39
PTCH1-203ENST00000375274 CCZ1BP86790 482 aa12.6□□□□□ -0.39
PTCH1-203ENST00000375274 CCZ1P86791 482 aaPredicted RBP12.6□□□□□ -0.39
PTCH1-203ENST00000375274 LRRC63Q05C16 580 aa12.6□□□□□ -0.39
PTCH1-203ENST00000375274 TMTC3Q6ZXV5 915 aa12.6□□□□□ -0.39
PTCH1-203ENST00000375274 PIGSQ96S52 555 aa12.6□□□□□ -0.39
PTCH1-203ENST00000375274 GLI2P10070 1586 aa12.6□□□□□ -0.39
PTCH1-203ENST00000375274 ERCC6L2Q5T890 1561 aa12.6□□□□□ -0.39
PTCH1-203ENST00000375274 TADA3O75528 432 aa12.6□□□□□ -0.39
PTCH1-203ENST00000375274 TRIM37O94972 964 aa12.6□□□□□ -0.39
PTCH1-203ENST00000375274 SERPING1P05155 500 aa12.6□□□□□ -0.39
PTCH1-203ENST00000375274 PDE6CP51160 858 aa12.6□□□□□ -0.39
PTCH1-203ENST00000375274 WDR17Q8IZU2 1322 aa12.6□□□□□ -0.39
PTCH1-203ENST00000375274 USP42Q9H9J4 1324 aaKnown RBP12.6□□□□□ -0.39
PTCH1-203ENST00000375274 ANO9A1A5B4 782 aa12.59□□□□□ -0.39
PTCH1-203ENST00000375274 SRGAP2O75044 1071 aa12.59□□□□□ -0.39
PTCH1-203ENST00000375274 KCNJ6P48051 423 aa12.59□□□□□ -0.39
PTCH1-203ENST00000375274 MRPS25P82663 173 aaKnown RBP12.59□□□□□ -0.39
PTCH1-203ENST00000375274 ICA1Q05084 483 aa12.59□□□□□ -0.39
PTCH1-203ENST00000375274 CERKLQ49MI3 558 aaPredicted RBP12.59□□□□□ -0.39
PTCH1-203ENST00000375274 USP17L2Q6R6M4 530 aa12.59□□□□□ -0.39
PTCH1-203ENST00000375274 ARMC9Q7Z3E5 817 aa12.59□□□□□ -0.39
PTCH1-203ENST00000375274 PBKQ96KB5 322 aa12.59□□□□□ -0.39
PTCH1-203ENST00000375274 RAB3IPQ96QF0 476 aaPredicted RBP12.59□□□□□ -0.39
PTCH1-203ENST00000375274 AMNQ9BXJ7 453 aa12.59□□□□□ -0.39
PTCH1-203ENST00000375274 EMILIN3Q9NT22 766 aa12.59□□□□□ -0.39
PTCH1-203ENST00000375274 NEDD4P46934 1319 aa12.59□□□□□ -0.39
PTCH1-203ENST00000375274 NCAPD2Q15021 1401 aa12.59□□□□□ -0.39
PTCH1-203ENST00000375274 ERVV-1B6SEH8 477 aa12.59□□□□□ -0.39
PTCH1-203ENST00000375274 USP17L8P0C7I0 530 aa12.59□□□□□ -0.39
PTCH1-203ENST00000375274 EXOSC10Q01780 885 aaKnown RBP12.59□□□□□ -0.39
PTCH1-203ENST00000375274 RASA3Q14644 834 aa12.59□□□□□ -0.39
PTCH1-203ENST00000375274 CAPN12Q6ZSI9 719 aa12.59□□□□□ -0.39
PTCH1-203ENST00000375274 NLRX1Q86UT6 975 aa12.59□□□□□ -0.39
PTCH1-203ENST00000375274 FAM186BQ8IYM0 893 aa12.59□□□□□ -0.39
PTCH1-203ENST00000375274 TTC16Q8NEE8 873 aa12.59□□□□□ -0.39
PTCH1-203ENST00000375274 OXER1Q8TDS5 423 aa12.59□□□□□ -0.39
PTCH1-203ENST00000375274 WDR24Q96S15 920 aa12.59□□□□□ -0.39
PTCH1-203ENST00000375274 IL25Q9H293 177 aa12.59□□□□□ -0.39
PTCH1-203ENST00000375274 C1orf112Q9NSG2 853 aa12.59□□□□□ -0.39
PTCH1-203ENST00000375274 KCNG1Q9UIX4 513 aa12.59□□□□□ -0.39
PTCH1-203ENST00000375274 NFU1Q9UMS0 254 aa12.59□□□□□ -0.39
PTCH1-203ENST00000375274 UBN2Q6ZU65 1347 aa12.59□□□□□ -0.39
PTCH1-203ENST00000375274 PRR29P0C7W0 189 aa12.59□□□□□ -0.39
PTCH1-203ENST00000375274 ATF2P15336 505 aa12.59□□□□□ -0.39
PTCH1-203ENST00000375274 DGKHQ86XP1 1220 aa12.59□□□□□ -0.39
PTCH1-203ENST00000375274 PALM2Q8IXS6 379 aa12.59□□□□□ -0.39
PTCH1-203ENST00000375274 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.59□□□□□ -0.39
PTCH1-203ENST00000375274 TCP11Q8WWU5 503 aa12.59□□□□□ -0.39
PTCH1-203ENST00000375274 LY9Q9HBG7 655 aa12.59□□□□□ -0.39
PTCH1-203ENST00000375274 NCOA3Q9Y6Q9 1424 aa12.59□□□□□ -0.39
PTCH1-203ENST00000375274 TRIM49BA6NDI0 452 aa12.59□□□□□ -0.39
PTCH1-203ENST00000375274 SNAP23O00161 211 aa12.59□□□□□ -0.39
PTCH1-203ENST00000375274 FOXN1O15353 648 aa12.59□□□□□ -0.39
PTCH1-203ENST00000375274 ATF7P17544 494 aaPredicted RBP12.59□□□□□ -0.39
PTCH1-203ENST00000375274 PSMD2Q13200 908 aa12.59□□□□□ -0.39
PTCH1-203ENST00000375274 DPF2Q92785 391 aa12.59□□□□□ -0.39
PTCH1-203ENST00000375274 COA7Q96BR5 231 aa12.59□□□□□ -0.39
PTCH1-203ENST00000375274 TBC1D31Q96DN5 1066 aa12.59□□□□□ -0.39
PTCH1-203ENST00000375274 RILPQ96NA2 401 aa12.59□□□□□ -0.39
PTCH1-203ENST00000375274 MRFAP1Q9Y605 127 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms