RNA–Protein interactions for RNA: ENST00000374982.5

HLA-DRA-201, Transcript of major histocompatibility complex, class II, DR alpha, humanhuman

BASIC

Gene HLA-DRA, Length 1,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRA-201ENST00000374982 MAP1BP46821 2468 aaKnown RBP12.15□□□□□ -0.46
HLA-DRA-201ENST00000374982 USP17L12C9JPN9 530 aa12.15□□□□□ -0.46
HLA-DRA-201ENST00000374982 USP17L21D6R901 530 aa12.15□□□□□ -0.46
HLA-DRA-201ENST00000374982 ZBED4O75132 1171 aa12.15□□□□□ -0.46
HLA-DRA-201ENST00000374982 PRPF38AQ8NAV1 312 aaKnown RBP12.15□□□□□ -0.46
HLA-DRA-201ENST00000374982 RIOK1Q9BRS2 568 aaKnown RBP12.15□□□□□ -0.46
HLA-DRA-201ENST00000374982 A1CFQ9NQ94 594 aaKnown RBP12.15□□□□□ -0.46
HLA-DRA-201ENST00000374982 CTDP1Q9Y5B0 961 aaPredicted RBP12.15□□□□□ -0.46
HLA-DRA-201ENST00000374982 PCDHGC5Q9Y5F6 944 aa12.15□□□□□ -0.46
HLA-DRA-201ENST00000374982 MYH4Q9Y623 1939 aa12.15□□□□□ -0.46
HLA-DRA-201ENST00000374982 ZNF292O60281 2723 aa12.14□□□□□ -0.47
HLA-DRA-201ENST00000374982 GRM6O15303 877 aa12.14□□□□□ -0.47
HLA-DRA-201ENST00000374982 SRGAP3O43295 1099 aa12.14□□□□□ -0.47
HLA-DRA-201ENST00000374982 CSPG5O95196 566 aa12.14□□□□□ -0.47
HLA-DRA-201ENST00000374982 AMHP03971 560 aa12.14□□□□□ -0.47
HLA-DRA-201ENST00000374982 CKBP12277 381 aa12.14□□□□□ -0.47
HLA-DRA-201ENST00000374982 CHMP4BP1P59074 171 aa12.14□□□□□ -0.47
HLA-DRA-201ENST00000374982 RBL2Q08999 1139 aa12.14□□□□□ -0.47
HLA-DRA-201ENST00000374982 YME1L1Q96TA2 773 aa12.14□□□□□ -0.47
HLA-DRA-201ENST00000374982 PHF7Q9BWX1 381 aaPredicted RBP12.14□□□□□ -0.47
HLA-DRA-201ENST00000374982 PRKRIP1Q9H875 184 aaPredicted RBP12.14□□□□□ -0.47
HLA-DRA-201ENST00000374982 SLC38A10Q9HBR0 1119 aa12.14□□□□□ -0.47
HLA-DRA-201ENST00000374982 CLEC1BQ9P126 229 aa12.14□□□□□ -0.47
HLA-DRA-201ENST00000374982 COG6Q9Y2V7 657 aa12.14□□□□□ -0.47
HLA-DRA-201ENST00000374982 USP15Q9Y4E8 981 aaPredicted RBP12.14□□□□□ -0.47
HLA-DRA-201ENST00000374982 E9PSI1 815 aa12.13□□□□□ -0.47
HLA-DRA-201ENST00000374982 COASYQ13057 564 aa12.13□□□□□ -0.47
HLA-DRA-201ENST00000374982 ACAP1Q15027 740 aa12.13□□□□□ -0.47
HLA-DRA-201ENST00000374982 CCDC158Q5M9N0 1113 aa12.13□□□□□ -0.47
HLA-DRA-201ENST00000374982 GDF6Q6KF10 455 aaPredicted RBP12.13□□□□□ -0.47
HLA-DRA-201ENST00000374982 OR6J1Q8NGC5 347 aa12.13□□□□□ -0.47
HLA-DRA-201ENST00000374982 KIFC2Q96AC6 838 aa12.13□□□□□ -0.47
HLA-DRA-201ENST00000374982 CCDC17Q96LX7 622 aa12.13□□□□□ -0.47
HLA-DRA-201ENST00000374982 DBNDD2Q9BQY9 259 aa12.13□□□□□ -0.47
HLA-DRA-201ENST00000374982 LMAN2LQ9H0V9 348 aa12.13□□□□□ -0.47
HLA-DRA-201ENST00000374982 ACAD9Q9H845 621 aa12.13□□□□□ -0.47
HLA-DRA-201ENST00000374982 KANSL2Q9H9L4 492 aa12.13□□□□□ -0.47
HLA-DRA-201ENST00000374982 VTA1Q9NP79 307 aa12.13□□□□□ -0.47
HLA-DRA-201ENST00000374982 CHD6Q8TD26 2715 aa12.12□□□□□ -0.47
HLA-DRA-201ENST00000374982 CTNNB1P35222 781 aa12.12□□□□□ -0.47
HLA-DRA-201ENST00000374982 DDX10Q13206 875 aaKnown RBP12.12□□□□□ -0.47
HLA-DRA-201ENST00000374982 ZBTB33Q86T24 672 aa12.12□□□□□ -0.47
HLA-DRA-201ENST00000374982 KCNG4Q8TDN1 519 aa12.12□□□□□ -0.47
HLA-DRA-201ENST00000374982 WDR11Q9BZH6 1224 aa12.12□□□□□ -0.47
HLA-DRA-201ENST00000374982 ATRXP46100 2492 aa12.12□□□□□ -0.47
HLA-DRA-201ENST00000374982 C5orf67F2Z3F1 127 aa12.11□□□□□ -0.47
HLA-DRA-201ENST00000374982 LGR5O75473 907 aa12.11□□□□□ -0.47
HLA-DRA-201ENST00000374982 UPP2O95045 317 aa12.11□□□□□ -0.47
HLA-DRA-201ENST00000374982 OAZ1P54368 228 aa12.11□□□□□ -0.47
HLA-DRA-201ENST00000374982 MBTPS1Q14703 1052 aa12.11□□□□□ -0.47
HLA-DRA-201ENST00000374982 ASTLQ6HA08 431 aaPredicted RBP12.11□□□□□ -0.47
HLA-DRA-201ENST00000374982 TRAF7Q6Q0C0 670 aa12.11□□□□□ -0.47
HLA-DRA-201ENST00000374982 SDR42E1Q8WUS8 393 aa12.11□□□□□ -0.47
HLA-DRA-201ENST00000374982 ZNF512BQ96KM6 892 aaPredicted RBP12.11□□□□□ -0.47
HLA-DRA-201ENST00000374982 MEIS3Q99687 375 aa12.11□□□□□ -0.47
HLA-DRA-201ENST00000374982 C11orf84Q9BUA3 381 aaPredicted RBP12.11□□□□□ -0.47
HLA-DRA-201ENST00000374982 CRNKL1Q9BZJ0 848 aaKnown RBP12.11□□□□□ -0.47
HLA-DRA-201ENST00000374982 DCP1AQ9NPI6 582 aaPredicted RBP12.11□□□□□ -0.47
HLA-DRA-201ENST00000374982 RNF146Q9NTX7 359 aa12.11□□□□□ -0.47
HLA-DRA-201ENST00000374982 HDAC5Q9UQL6 1122 aa12.11□□□□□ -0.47
HLA-DRA-201ENST00000374982 KIAA1671Q9BY89 1806 aa12.11□□□□□ -0.47
HLA-DRA-201ENST00000374982 RAD50Q92878 1312 aa12.11□□□□□ -0.47
HLA-DRA-201ENST00000374982 MAGEB6P1A0A0J9YX57 407 aa12.1□□□□□ -0.47
HLA-DRA-201ENST00000374982 KPNA6O60684 536 aa12.1□□□□□ -0.47
HLA-DRA-201ENST00000374982 NDUFB10O96000 172 aa12.1□□□□□ -0.47
HLA-DRA-201ENST00000374982 LMNAP02545 664 aaKnown RBP12.1□□□□□ -0.47
HLA-DRA-201ENST00000374982 CDK8P49336 464 aa12.1□□□□□ -0.47
HLA-DRA-201ENST00000374982 MTX1Q13505 466 aa12.1□□□□□ -0.47
HLA-DRA-201ENST00000374982 BRDTQ58F21 947 aaPredicted RBP12.1□□□□□ -0.47
HLA-DRA-201ENST00000374982 ZNF618Q5T7W0 954 aa12.1□□□□□ -0.47
HLA-DRA-201ENST00000374982 DBF4BQ8NFT6 615 aa12.1□□□□□ -0.47
HLA-DRA-201ENST00000374982 MORC4Q8TE76 937 aa12.1□□□□□ -0.47
HLA-DRA-201ENST00000374982 TOP1MTQ969P6 601 aa12.1□□□□□ -0.47
HLA-DRA-201ENST00000374982 BARX2Q9UMQ3 279 aaPredicted RBP12.1□□□□□ -0.47
HLA-DRA-201ENST00000374982 EP300Q09472 2414 aaPredicted RBP12.1□□□□□ -0.47
HLA-DRA-201ENST00000374982 CHD8Q9HCK8 2581 aa12.09□□□□□ -0.47
HLA-DRA-201ENST00000374982 A6NJR5 290 aa12.09□□□□□ -0.47
HLA-DRA-201ENST00000374982 F5H6K3 240 aa12.09□□□□□ -0.47
HLA-DRA-201ENST00000374982 GLP2RO95838 553 aa12.09□□□□□ -0.47
HLA-DRA-201ENST00000374982 MMP1P03956 469 aa12.09□□□□□ -0.47
HLA-DRA-201ENST00000374982 RB1P06400 928 aa12.09□□□□□ -0.47
HLA-DRA-201ENST00000374982 LINC00271P0C7V0 271 aa12.09□□□□□ -0.47
HLA-DRA-201ENST00000374982 HOXB3P14651 431 aaPredicted RBP12.09□□□□□ -0.47
HLA-DRA-201ENST00000374982 KLRC3Q07444 240 aa12.09□□□□□ -0.47
HLA-DRA-201ENST00000374982 RSPO4Q2I0M5 234 aaPredicted RBP12.09□□□□□ -0.47
HLA-DRA-201ENST00000374982 TNNI3KQ59H18 835 aa12.09□□□□□ -0.47
HLA-DRA-201ENST00000374982 ADGRD2Q7Z7M1 963 aa12.09□□□□□ -0.47
HLA-DRA-201ENST00000374982 SESTD1Q86VW0 696 aa12.09□□□□□ -0.47
HLA-DRA-201ENST00000374982 EFHBQ8N7U6 833 aa12.09□□□□□ -0.47
HLA-DRA-201ENST00000374982 KREMEN2Q8NCW0 462 aa12.09□□□□□ -0.47
HLA-DRA-201ENST00000374982 SSH1Q8WYL5 1049 aa12.09□□□□□ -0.47
HLA-DRA-201ENST00000374982 PURBQ96QR8 312 aaKnown RBP12.09□□□□□ -0.47
HLA-DRA-201ENST00000374982 ANTXR1Q9H6X2 564 aa12.09□□□□□ -0.47
HLA-DRA-201ENST00000374982 FPGT-TNNI3KV9GXZ4 949 aa12.09□□□□□ -0.47
HLA-DRA-201ENST00000374982 USP24Q9UPU5 2620 aa12.09□□□□□ -0.47
HLA-DRA-201ENST00000374982 MYO10Q9HD67 2058 aa12.08□□□□□ -0.48
HLA-DRA-201ENST00000374982 CYP2D7A0A087X1C5 515 aa12.08□□□□□ -0.48
HLA-DRA-201ENST00000374982 RBM47A0AV96 593 aaKnown RBP12.08□□□□□ -0.48
HLA-DRA-201ENST00000374982 ATF7P17544 494 aaPredicted RBP12.08□□□□□ -0.48
HLA-DRA-201ENST00000374982 BMPR1AP36894 532 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms