RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 ZNF654Q8IZM8 581 aa12.65□□□□□ -0.38
HLA-DQA1-202ENST00000374949 ANKRD35Q8N283 1001 aa12.65□□□□□ -0.38
HLA-DQA1-202ENST00000374949 PRPF38AQ8NAV1 312 aaKnown RBP12.65□□□□□ -0.38
HLA-DQA1-202ENST00000374949 PPM1EQ8WY54 764 aa12.65□□□□□ -0.38
HLA-DQA1-202ENST00000374949 SYMPKQ92797 1274 aaKnown RBP12.65□□□□□ -0.38
HLA-DQA1-202ENST00000374949 PBX4Q9BYU1 374 aa12.65□□□□□ -0.38
HLA-DQA1-202ENST00000374949 UPF3AQ9H1J1 476 aaKnown RBP12.65□□□□□ -0.38
HLA-DQA1-202ENST00000374949 PRDM12Q9H4Q4 367 aa12.65□□□□□ -0.38
HLA-DQA1-202ENST00000374949 NCOA5Q9HCD5 579 aaKnown RBP12.65□□□□□ -0.38
HLA-DQA1-202ENST00000374949 IL17RBQ9NRM6 502 aa12.65□□□□□ -0.38
HLA-DQA1-202ENST00000374949 HOMER2Q9NSB8 354 aa12.65□□□□□ -0.38
HLA-DQA1-202ENST00000374949 NYAP2Q9P242 653 aa12.65□□□□□ -0.38
HLA-DQA1-202ENST00000374949 CLIP2Q9UDT6 1046 aa12.65□□□□□ -0.38
HLA-DQA1-202ENST00000374949 CTDP1Q9Y5B0 961 aaPredicted RBP12.65□□□□□ -0.38
HLA-DQA1-202ENST00000374949 LCTP09848 1927 aa12.64□□□□□ -0.39
HLA-DQA1-202ENST00000374949 IGKV6D-41A0A0C4DH26 115 aa12.64□□□□□ -0.39
HLA-DQA1-202ENST00000374949 CCDC196A0A1B0GTZ2 297 aa12.64□□□□□ -0.39
HLA-DQA1-202ENST00000374949 GOLGA8AA7E2F4 631 aa12.64□□□□□ -0.39
HLA-DQA1-202ENST00000374949 CPLX1O14810 134 aa12.64□□□□□ -0.39
HLA-DQA1-202ENST00000374949 ATP2A1O14983 1001 aa12.64□□□□□ -0.39
HLA-DQA1-202ENST00000374949 NMT2O60551 498 aa12.64□□□□□ -0.39
HLA-DQA1-202ENST00000374949 ZBED4O75132 1171 aa12.64□□□□□ -0.39
HLA-DQA1-202ENST00000374949 PDCP20941 246 aa12.64□□□□□ -0.39
HLA-DQA1-202ENST00000374949 CDK7P50613 346 aa12.64□□□□□ -0.39
HLA-DQA1-202ENST00000374949 HMGN5P82970 282 aaKnown RBP12.64□□□□□ -0.39
HLA-DQA1-202ENST00000374949 BEX3Q00994 111 aa12.64□□□□□ -0.39
HLA-DQA1-202ENST00000374949 GNASQ5JWF2 1037 aa12.64□□□□□ -0.39
HLA-DQA1-202ENST00000374949 FAM126BQ8IXS8 530 aa12.64□□□□□ -0.39
HLA-DQA1-202ENST00000374949 FANCBQ8NB91 859 aa12.64□□□□□ -0.39
HLA-DQA1-202ENST00000374949 PCSK9Q8NBP7 692 aaKnown RBP12.64□□□□□ -0.39
HLA-DQA1-202ENST00000374949 NSUN7Q8NE18 718 aaKnown RBP12.64□□□□□ -0.39
HLA-DQA1-202ENST00000374949 SMARCC2Q8TAQ2 1214 aa12.64□□□□□ -0.39
HLA-DQA1-202ENST00000374949 VTI1AQ96AJ9 217 aa12.64□□□□□ -0.39
HLA-DQA1-202ENST00000374949 CEP95Q96GE4 821 aa12.64□□□□□ -0.39
HLA-DQA1-202ENST00000374949 KAT14Q9H8E8 782 aa12.64□□□□□ -0.39
HLA-DQA1-202ENST00000374949 SLC38A10Q9HBR0 1119 aa12.64□□□□□ -0.39
HLA-DQA1-202ENST00000374949 ISY1Q9ULR0 285 aaKnown RBP12.64□□□□□ -0.39
HLA-DQA1-202ENST00000374949 MUC3AQ02505 3323 aa12.64□□□□□ -0.39
HLA-DQA1-202ENST00000374949 ARVCFO00192 962 aa12.63□□□□□ -0.39
HLA-DQA1-202ENST00000374949 CTAGE5O15320 804 aa12.63□□□□□ -0.39
HLA-DQA1-202ENST00000374949 CDKL5O76039 1030 aa12.63□□□□□ -0.39
HLA-DQA1-202ENST00000374949 CTDNEP1O95476 244 aa12.63□□□□□ -0.39
HLA-DQA1-202ENST00000374949 PTGS1P23219 599 aa12.63□□□□□ -0.39
HLA-DQA1-202ENST00000374949 CYP2C18P33260 490 aa12.63□□□□□ -0.39
HLA-DQA1-202ENST00000374949 ADD1P35611 737 aaKnown RBP12.63□□□□□ -0.39
HLA-DQA1-202ENST00000374949 GJA9P57773 515 aa12.63□□□□□ -0.39
HLA-DQA1-202ENST00000374949 CNTN2Q02246 1040 aa12.63□□□□□ -0.39
HLA-DQA1-202ENST00000374949 PPP4R3BQ5MIZ7 849 aa12.63□□□□□ -0.39
HLA-DQA1-202ENST00000374949 RASIP1Q5U651 963 aa12.63□□□□□ -0.39
HLA-DQA1-202ENST00000374949 LARP1BQ659C4 914 aaKnown RBP12.63□□□□□ -0.39
HLA-DQA1-202ENST00000374949 RCSD1Q6JBY9 416 aa12.63□□□□□ -0.39
HLA-DQA1-202ENST00000374949 PSRC1Q6PGN9 363 aaPredicted RBP12.63□□□□□ -0.39
HLA-DQA1-202ENST00000374949 CCDC174Q6PII3 467 aa12.63□□□□□ -0.39
HLA-DQA1-202ENST00000374949 ZNF365Q70YC5 407 aa12.63□□□□□ -0.39
HLA-DQA1-202ENST00000374949 MICU3Q86XE3 530 aa12.63□□□□□ -0.39
HLA-DQA1-202ENST00000374949 RAB11FIP4Q86YS3 637 aa12.63□□□□□ -0.39
HLA-DQA1-202ENST00000374949 CCDC144CPQ8IYA2 1237 aa12.63□□□□□ -0.39
HLA-DQA1-202ENST00000374949 TMEM199Q8N511 208 aa12.63□□□□□ -0.39
HLA-DQA1-202ENST00000374949 FAM184AQ8NB25 1140 aa12.63□□□□□ -0.39
HLA-DQA1-202ENST00000374949 GAS2L1Q99501 681 aaPredicted RBP12.63□□□□□ -0.39
HLA-DQA1-202ENST00000374949 KATNBL1Q9H079 304 aa12.63□□□□□ -0.39
HLA-DQA1-202ENST00000374949 ABHD16BQ9H3Z7 469 aa12.63□□□□□ -0.39
HLA-DQA1-202ENST00000374949 SPC25Q9HBM1 224 aa12.63□□□□□ -0.39
HLA-DQA1-202ENST00000374949 KIF3AQ9Y496 699 aa12.63□□□□□ -0.39
HLA-DQA1-202ENST00000374949 DDX49Q9Y6V7 483 aaKnown RBP12.63□□□□□ -0.39
HLA-DQA1-202ENST00000374949 NCOR1O75376 2440 aa12.63□□□□□ -0.39
HLA-DQA1-202ENST00000374949 ASTN1O14525 1302 aa12.62□□□□□ -0.39
HLA-DQA1-202ENST00000374949 CHD9Q3L8U1 2897 aa12.62□□□□□ -0.39
HLA-DQA1-202ENST00000374949 PLIN4Q96Q06 1357 aa12.62□□□□□ -0.39
HLA-DQA1-202ENST00000374949 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.62□□□□□ -0.39
HLA-DQA1-202ENST00000374949 PTPDC1A2A3K4 754 aa12.62□□□□□ -0.39
HLA-DQA1-202ENST00000374949 TNFRSF10AO00220 468 aa12.62□□□□□ -0.39
HLA-DQA1-202ENST00000374949 TLR3O15455 904 aaKnown RBP12.62□□□□□ -0.39
HLA-DQA1-202ENST00000374949 JAK2O60674 1132 aa12.62□□□□□ -0.39
HLA-DQA1-202ENST00000374949 DDAH1O94760 285 aa12.62□□□□□ -0.39
HLA-DQA1-202ENST00000374949 RXRAP19793 462 aa12.62□□□□□ -0.39
HLA-DQA1-202ENST00000374949 SYT1P21579 422 aa12.62□□□□□ -0.39
HLA-DQA1-202ENST00000374949 CDC27P30260 824 aa12.62□□□□□ -0.39
HLA-DQA1-202ENST00000374949 RTN1Q16799 776 aa12.62□□□□□ -0.39
HLA-DQA1-202ENST00000374949 CXCL17Q6UXB2 119 aa12.62□□□□□ -0.39
HLA-DQA1-202ENST00000374949 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.62□□□□□ -0.39
HLA-DQA1-202ENST00000374949 GMCL1P1Q8NEA9 526 aa12.62□□□□□ -0.39
HLA-DQA1-202ENST00000374949 CHST13Q8NET6 341 aa12.62□□□□□ -0.39
HLA-DQA1-202ENST00000374949 MYL10Q9BUA6 226 aa12.62□□□□□ -0.39
HLA-DQA1-202ENST00000374949 FAM217BQ9NTX9 383 aaPredicted RBP12.62□□□□□ -0.39
HLA-DQA1-202ENST00000374949 RBM28Q9NW13 759 aaKnown RBP12.62□□□□□ -0.39
HLA-DQA1-202ENST00000374949 CXXC1Q9P0U4 656 aaPredicted RBP12.62□□□□□ -0.39
HLA-DQA1-202ENST00000374949 FBXO40Q9UH90 709 aa12.62□□□□□ -0.39
HLA-DQA1-202ENST00000374949 FEM1BQ9UK73 627 aa12.62□□□□□ -0.39
HLA-DQA1-202ENST00000374949 UMODL1Q5DID0 1318 aa12.62□□□□□ -0.39
HLA-DQA1-202ENST00000374949 NID2Q14112 1375 aa12.61□□□□□ -0.39
HLA-DQA1-202ENST00000374949 STX6O43752 255 aa12.61□□□□□ -0.39
HLA-DQA1-202ENST00000374949 DTNBO60941 627 aa12.61□□□□□ -0.39
HLA-DQA1-202ENST00000374949 BRD1O95696 1058 aa12.61□□□□□ -0.39
HLA-DQA1-202ENST00000374949 TOP1P11387 765 aaKnown RBP12.61□□□□□ -0.39
HLA-DQA1-202ENST00000374949 NOVP48745 357 aa12.61□□□□□ -0.39
HLA-DQA1-202ENST00000374949 OAZ1P54368 228 aa12.61□□□□□ -0.39
HLA-DQA1-202ENST00000374949 TROAPQ12815 778 aa12.61□□□□□ -0.39
HLA-DQA1-202ENST00000374949 ADGRE1Q14246 886 aa12.61□□□□□ -0.39
HLA-DQA1-202ENST00000374949 SLFN13Q68D06 897 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms