RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 CDCA5Q96FF9 252 aa6.9□□□□□ -1.3
PTPN3-202ENST00000374541 DDX27Q96GQ7 796 aaKnown RBP6.9□□□□□ -1.3
PTPN3-202ENST00000374541 DEFB118Q96PH6 123 aa6.9□□□□□ -1.3
PTPN3-202ENST00000374541 HOMER3Q9NSC5 361 aa6.9□□□□□ -1.3
PTPN3-202ENST00000374541 NRBP2Q9NSY0 501 aa6.9□□□□□ -1.3
PTPN3-202ENST00000374541 INPP5FQ9Y2H2 1132 aa6.9□□□□□ -1.3
PTPN3-202ENST00000374541 ASB14A6NK59 587 aa6.9□□□□□ -1.3
PTPN3-202ENST00000374541 ISM2Q6H9L7 571 aa6.9□□□□□ -1.3
PTPN3-202ENST00000374541 FOXP4Q8IVH2 680 aaPredicted RBP6.9□□□□□ -1.3
PTPN3-202ENST00000374541 MLKLQ8NB16 471 aa6.9□□□□□ -1.3
PTPN3-202ENST00000374541 FNDC3AQ9Y2H6 1198 aaKnown RBP6.9□□□□□ -1.3
PTPN3-202ENST00000374541 GCLCP48506 637 aaPredicted RBP6.9□□□□□ -1.3
PTPN3-202ENST00000374541 PDE1AP54750 535 aa6.9□□□□□ -1.3
PTPN3-202ENST00000374541 CFAP221Q4G0U5 840 aa6.9□□□□□ -1.3
PTPN3-202ENST00000374541 HAUS3Q68CZ6 603 aa6.9□□□□□ -1.3
PTPN3-202ENST00000374541 ANKRD44Q8N8A2 993 aa6.9□□□□□ -1.3
PTPN3-202ENST00000374541 OR6J1Q8NGC5 347 aa6.9□□□□□ -1.3
PTPN3-202ENST00000374541 RNPC3Q96LT9 517 aaKnown RBP6.9□□□□□ -1.3
PTPN3-202ENST00000374541 CAMKK2Q96RR4 588 aa6.9□□□□□ -1.3
PTPN3-202ENST00000374541 LMTK2Q8IWU2 1503 aa6.9□□□□□ -1.31
PTPN3-202ENST00000374541 HPDP32754 393 aaPredicted RBP6.9□□□□□ -1.31
PTPN3-202ENST00000374541 IL13P35225 146 aa6.9□□□□□ -1.31
PTPN3-202ENST00000374541 HTRA3P83110 453 aa6.9□□□□□ -1.31
PTPN3-202ENST00000374541 DEFB128Q7Z7B8 93 aa6.9□□□□□ -1.31
PTPN3-202ENST00000374541 LRRC47Q8N1G4 583 aaKnown RBP6.9□□□□□ -1.31
PTPN3-202ENST00000374541 NLRP7Q8WX94 980 aa6.9□□□□□ -1.31
PTPN3-202ENST00000374541 ZNF830Q96NB3 372 aaPredicted RBP6.9□□□□□ -1.31
PTPN3-202ENST00000374541 ENTPD7Q9NQZ7 604 aa6.9□□□□□ -1.31
PTPN3-202ENST00000374541 AGTPBP1Q9UPW5 1226 aa6.9□□□□□ -1.31
PTPN3-202ENST00000374541 KRT3P12035 628 aa6.9□□□□□ -1.31
PTPN3-202ENST00000374541 BFSP2Q13515 415 aa6.9□□□□□ -1.31
PTPN3-202ENST00000374541 TTLL4Q14679 1199 aa6.9□□□□□ -1.31
PTPN3-202ENST00000374541 ASIC2Q16515 512 aa6.9□□□□□ -1.31
PTPN3-202ENST00000374541 Q6ZUG5 572 aa6.9□□□□□ -1.31
PTPN3-202ENST00000374541 IGSF22Q8N9C0 903 aa6.9□□□□□ -1.31
PTPN3-202ENST00000374541 LLPHQ9BRT6 129 aaKnown RBP6.9□□□□□ -1.31
PTPN3-202ENST00000374541 KLHL14Q9P2G3 628 aa6.9□□□□□ -1.31
PTPN3-202ENST00000374541 SDSP20132 328 aa6.89□□□□□ -1.31
PTPN3-202ENST00000374541 SMTNP53814 917 aa6.89□□□□□ -1.31
PTPN3-202ENST00000374541 DNM1Q05193 864 aaKnown RBP6.89□□□□□ -1.31
PTPN3-202ENST00000374541 MUM1Q2TAK8 710 aa6.89□□□□□ -1.31
PTPN3-202ENST00000374541 CC2D1AQ6P1N0 951 aaPredicted RBP6.89□□□□□ -1.31
PTPN3-202ENST00000374541 PCSK9Q8NBP7 692 aaKnown RBP6.89□□□□□ -1.31
PTPN3-202ENST00000374541 ZKSCAN3Q9BRR0 538 aa6.89□□□□□ -1.31
PTPN3-202ENST00000374541 NOC4LQ9BVI4 516 aaKnown RBP6.89□□□□□ -1.31
PTPN3-202ENST00000374541 ZC3H13Q5T200 1668 aaKnown RBP6.89□□□□□ -1.31
PTPN3-202ENST00000374541 TRAF5O00463 557 aa6.89□□□□□ -1.31
PTPN3-202ENST00000374541 CCND2P30279 289 aa6.89□□□□□ -1.31
PTPN3-202ENST00000374541 IFRD2Q12894 506 aaPredicted RBP6.89□□□□□ -1.31
PTPN3-202ENST00000374541 CCDC85BQ15834 202 aaPredicted RBP6.89□□□□□ -1.31
PTPN3-202ENST00000374541 PTPROQ16827 1216 aa6.89□□□□□ -1.31
PTPN3-202ENST00000374541 PLEKHH3Q7Z736 793 aa6.89□□□□□ -1.31
PTPN3-202ENST00000374541 ZBTB8OSQ8IWT0 167 aa6.89□□□□□ -1.31
PTPN3-202ENST00000374541 CD99L2Q8TCZ2 262 aa6.89□□□□□ -1.31
PTPN3-202ENST00000374541 CD209Q9NNX6 404 aa6.89□□□□□ -1.31
PTPN3-202ENST00000374541 FPGT-TNNI3KV9GXZ4 949 aa6.89□□□□□ -1.31
PTPN3-202ENST00000374541 TET3O43151 1660 aa6.89□□□□□ -1.31
PTPN3-202ENST00000374541 WDR46O15213 610 aaKnown RBP6.89□□□□□ -1.31
PTPN3-202ENST00000374541 KIF11P52732 1056 aa6.89□□□□□ -1.31
PTPN3-202ENST00000374541 OTUD6AQ7L8S5 288 aa6.89□□□□□ -1.31
PTPN3-202ENST00000374541 LMCD1Q9NZU5 365 aa6.89□□□□□ -1.31
PTPN3-202ENST00000374541 ARPP21Q9UBL0 812 aaPredicted RBP6.89□□□□□ -1.31
PTPN3-202ENST00000374541 TMEM265A0A087WTH1 108 aa6.89□□□□□ -1.31
PTPN3-202ENST00000374541 PRDM1O75626 825 aa6.89□□□□□ -1.31
PTPN3-202ENST00000374541 PDCD2Q16342 344 aaPredicted RBP6.89□□□□□ -1.31
PTPN3-202ENST00000374541 HLFQ16534 295 aa6.89□□□□□ -1.31
PTPN3-202ENST00000374541 CCDC84Q86UT8 332 aaPredicted RBP6.89□□□□□ -1.31
PTPN3-202ENST00000374541 EDC3Q96F86 508 aaKnown RBP6.89□□□□□ -1.31
PTPN3-202ENST00000374541 TAF1DQ9H5J8 278 aaPredicted RBP6.89□□□□□ -1.31
PTPN3-202ENST00000374541 SERPINB13Q9UIV8 391 aa6.89□□□□□ -1.31
PTPN3-202ENST00000374541 NRXN1Q9ULB1 1477 aa6.89□□□□□ -1.31
PTPN3-202ENST00000374541 SUPT20HL2P0C7V6 817 aa6.89□□□□□ -1.31
PTPN3-202ENST00000374541 MAPK4P31152 587 aa6.89□□□□□ -1.31
PTPN3-202ENST00000374541 GCKP35557 465 aa6.89□□□□□ -1.31
PTPN3-202ENST00000374541 RAPGEF1Q13905 1077 aa6.89□□□□□ -1.31
PTPN3-202ENST00000374541 RBBP5Q15291 538 aaKnown RBP6.89□□□□□ -1.31
PTPN3-202ENST00000374541 SNRNP48Q6IEG0 339 aaKnown RBP6.89□□□□□ -1.31
PTPN3-202ENST00000374541 THNSL1Q8IYQ7 743 aa6.89□□□□□ -1.31
PTPN3-202ENST00000374541 GRK7Q8WTQ7 553 aa6.89□□□□□ -1.31
PTPN3-202ENST00000374541 PHACTR3Q96KR7 559 aa6.89□□□□□ -1.31
PTPN3-202ENST00000374541 KATNAL1Q9BW62 490 aa6.89□□□□□ -1.31
PTPN3-202ENST00000374541 MED4Q9NPJ6 270 aa6.89□□□□□ -1.31
PTPN3-202ENST00000374541 TRIM35Q9UPQ4 493 aa6.89□□□□□ -1.31
PTPN3-202ENST00000374541 UTRNP46939 3433 aa6.89□□□□□ -1.31
PTPN3-202ENST00000374541 PPLO60437 1756 aa6.89□□□□□ -1.31
PTPN3-202ENST00000374541 PDHXO00330 501 aa6.88□□□□□ -1.31
PTPN3-202ENST00000374541 RNF113AO15541 343 aaKnown RBP6.88□□□□□ -1.31
PTPN3-202ENST00000374541 DYNC1LI2O43237 492 aaPredicted RBP6.88□□□□□ -1.31
PTPN3-202ENST00000374541 U2AF2P26368 475 aaKnown RBP eCLIP6.88□□□□□ -1.31
PTPN3-202ENST00000374541 STAT2P52630 851 aa6.88□□□□□ -1.31
PTPN3-202ENST00000374541 ATP8B2P98198 1209 aa6.88□□□□□ -1.31
PTPN3-202ENST00000374541 TBC1D8BQ0IIM8 1120 aa6.88□□□□□ -1.31
PTPN3-202ENST00000374541 CUL4BQ13620 913 aa6.88□□□□□ -1.31
PTPN3-202ENST00000374541 PPP2R5DQ14738 602 aa6.88□□□□□ -1.31
PTPN3-202ENST00000374541 DHX32Q7L7V1 743 aaKnown RBP6.88□□□□□ -1.31
PTPN3-202ENST00000374541 SUGP1Q8IWZ8 645 aaKnown RBP6.88□□□□□ -1.31
PTPN3-202ENST00000374541 BBOF1Q8ND07 529 aa6.88□□□□□ -1.31
PTPN3-202ENST00000374541 DRC3Q9H069 523 aa6.88□□□□□ -1.31
PTPN3-202ENST00000374541 CLSTN2Q9H4D0 955 aa6.88□□□□□ -1.31
PTPN3-202ENST00000374541 MAP10Q9P2G4 905 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms