RNA–Protein interactions for RNA: ENST00000373888.8

SMPDL3B-201, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMPDL3B, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-201ENST00000373888 RTEL1Q9NZ71 1219 aa16.67■□□□□ 0.26
SMPDL3B-201ENST00000373888 WNT7AO00755 349 aa16.66■□□□□ 0.26
SMPDL3B-201ENST00000373888 STRNO43815 780 aa16.66■□□□□ 0.26
SMPDL3B-201ENST00000373888 CYP3A4P08684 503 aa16.66■□□□□ 0.26
SMPDL3B-201ENST00000373888 FCER1AP12319 257 aa16.66■□□□□ 0.26
SMPDL3B-201ENST00000373888 NASPP49321 788 aaPredicted RBP16.66■□□□□ 0.26
SMPDL3B-201ENST00000373888 USP11P51784 963 aa16.66■□□□□ 0.26
SMPDL3B-201ENST00000373888 ARHGAP4P98171 946 aa16.66■□□□□ 0.26
SMPDL3B-201ENST00000373888 KCTD2Q14681 263 aa16.66■□□□□ 0.26
SMPDL3B-201ENST00000373888 WDR78Q5VTH9 848 aa16.66■□□□□ 0.26
SMPDL3B-201ENST00000373888 ANO1Q5XXA6 986 aa16.66■□□□□ 0.26
SMPDL3B-201ENST00000373888 GPR142Q7Z601 462 aa16.66■□□□□ 0.26
SMPDL3B-201ENST00000373888 CCAR1Q8IX12 1150 aaKnown RBP16.66■□□□□ 0.26
SMPDL3B-201ENST00000373888 TAAR1Q96RJ0 339 aa16.66■□□□□ 0.26
SMPDL3B-201ENST00000373888 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.66■□□□□ 0.26
SMPDL3B-201ENST00000373888 TFIP11Q9UBB9 837 aaKnown RBP16.66■□□□□ 0.26
SMPDL3B-201ENST00000373888 CNPY2Q9Y2B0 182 aa16.66■□□□□ 0.26
SMPDL3B-201ENST00000373888 PCDHB6Q9Y5E3 794 aa16.66■□□□□ 0.26
SMPDL3B-201ENST00000373888 CLIC4Q9Y696 253 aa16.66■□□□□ 0.26
SMPDL3B-201ENST00000373888 DNAJC25-GNG10A0A024R161 153 aa16.65■□□□□ 0.26
SMPDL3B-201ENST00000373888 NCLP19338 710 aaKnown RBP16.65■□□□□ 0.26
SMPDL3B-201ENST00000373888 ATP2B1P20020 1258 aa16.65■□□□□ 0.26
SMPDL3B-201ENST00000373888 ORC2Q13416 577 aaPredicted RBP16.65■□□□□ 0.26
SMPDL3B-201ENST00000373888 KLHL40Q2TBA0 621 aa16.65■□□□□ 0.26
SMPDL3B-201ENST00000373888 LETM2Q2VYF4 491 aa16.65■□□□□ 0.26
SMPDL3B-201ENST00000373888 FAM133AQ8N9E0 248 aa16.65■□□□□ 0.26
SMPDL3B-201ENST00000373888 DNERQ8NFT8 737 aa16.65■□□□□ 0.26
SMPDL3B-201ENST00000373888 RMDN3Q96TC7 470 aa16.65■□□□□ 0.26
SMPDL3B-201ENST00000373888 SCAND2PQ9GZW5 306 aaPredicted RBP16.65■□□□□ 0.26
SMPDL3B-201ENST00000373888 RNF186Q9NXI6 227 aa16.65■□□□□ 0.26
SMPDL3B-201ENST00000373888 LCTP09848 1927 aa16.65■□□□□ 0.26
SMPDL3B-201ENST00000373888 POTEB2H3BUK9 544 aa16.65■□□□□ 0.26
SMPDL3B-201ENST00000373888 YEATS4O95619 227 aa16.65■□□□□ 0.26
SMPDL3B-201ENST00000373888 BMP15O95972 392 aa16.65■□□□□ 0.26
SMPDL3B-201ENST00000373888 CIITAP33076 1130 aa16.65■□□□□ 0.26
SMPDL3B-201ENST00000373888 SF3A1Q15459 793 aaKnown RBP16.65■□□□□ 0.26
SMPDL3B-201ENST00000373888 PPP4R3AQ6IN85 833 aa16.65■□□□□ 0.26
SMPDL3B-201ENST00000373888 MOXD1Q6UVY6 613 aa16.65■□□□□ 0.26
SMPDL3B-201ENST00000373888 PLEKHH3Q7Z736 793 aa16.65■□□□□ 0.26
SMPDL3B-201ENST00000373888 NSUN6Q8TEA1 469 aaKnown RBP16.65■□□□□ 0.26
SMPDL3B-201ENST00000373888 PURBQ96QR8 312 aaKnown RBP16.65■□□□□ 0.26
SMPDL3B-201ENST00000373888 NAP1L4Q99733 375 aaKnown RBP16.65■□□□□ 0.26
SMPDL3B-201ENST00000373888 PXMP2Q9NR77 195 aa16.65■□□□□ 0.26
SMPDL3B-201ENST00000373888 MORC2Q9Y6X9 1032 aaPredicted RBP16.65■□□□□ 0.26
SMPDL3B-201ENST00000373888 IVNS1ABPQ9Y6Y0 642 aa16.65■□□□□ 0.26
SMPDL3B-201ENST00000373888 MYH7BA7E2Y1 1941 aa16.65■□□□□ 0.26
SMPDL3B-201ENST00000373888 ZNF236Q9UL36 1845 aa16.64■□□□□ 0.25
SMPDL3B-201ENST00000373888 CYP3A7-CYP3A51PA0A087WV96 503 aa16.64■□□□□ 0.25
SMPDL3B-201ENST00000373888 CCNT1O60563 726 aaKnown RBP16.64■□□□□ 0.25
SMPDL3B-201ENST00000373888 GCFC2P16383 781 aaKnown RBP16.64■□□□□ 0.25
SMPDL3B-201ENST00000373888 PTPREP23469 700 aa16.64■□□□□ 0.25
SMPDL3B-201ENST00000373888 CYP3A7P24462 503 aa16.64■□□□□ 0.25
SMPDL3B-201ENST00000373888 CNTN2Q02246 1040 aa16.64■□□□□ 0.25
SMPDL3B-201ENST00000373888 CEBPZQ03701 1054 aaKnown RBP16.64■□□□□ 0.25
SMPDL3B-201ENST00000373888 GRB14Q14449 540 aa16.64■□□□□ 0.25
SMPDL3B-201ENST00000373888 SLC39A14Q15043 492 aa16.64■□□□□ 0.25
SMPDL3B-201ENST00000373888 PGM5Q15124 567 aa16.64■□□□□ 0.25
SMPDL3B-201ENST00000373888 PTPAQ15257 358 aa16.64■□□□□ 0.25
SMPDL3B-201ENST00000373888 ZNF174Q15697 407 aa16.64■□□□□ 0.25
SMPDL3B-201ENST00000373888 ARHGEF16Q5VV41 709 aa16.64■□□□□ 0.25
SMPDL3B-201ENST00000373888 PCNX4Q63HM2 1172 aa16.64■□□□□ 0.25
SMPDL3B-201ENST00000373888 LINC00301Q8NCQ3 95 aa16.64■□□□□ 0.25
SMPDL3B-201ENST00000373888 LEO1Q8WVC0 666 aaPredicted RBP16.64■□□□□ 0.25
SMPDL3B-201ENST00000373888 MBOAT7Q96N66 472 aa16.64■□□□□ 0.25
SMPDL3B-201ENST00000373888 PDCD2LQ9BRP1 358 aa16.64■□□□□ 0.25
SMPDL3B-201ENST00000373888 SAGE1Q9NXZ1 904 aa16.64■□□□□ 0.25
SMPDL3B-201ENST00000373888 RCOR1Q9UKL0 485 aa16.64■□□□□ 0.25
SMPDL3B-201ENST00000373888 CEP131Q9UPN4 1083 aa16.64■□□□□ 0.25
SMPDL3B-201ENST00000373888 PLXNB2O15031 1838 aa16.64■□□□□ 0.25
SMPDL3B-201ENST00000373888 SLC15A5A6NIM6 579 aa16.63■□□□□ 0.25
SMPDL3B-201ENST00000373888 ASTN1O14525 1302 aa16.63■□□□□ 0.25
SMPDL3B-201ENST00000373888 FIBPO43427 364 aa16.63■□□□□ 0.25
SMPDL3B-201ENST00000373888 TRPA1O75762 1119 aa16.63■□□□□ 0.25
SMPDL3B-201ENST00000373888 TBC1D8O95759 1140 aa16.63■□□□□ 0.25
SMPDL3B-201ENST00000373888 EIF2AK2P19525 551 aaKnown RBP16.63■□□□□ 0.25
SMPDL3B-201ENST00000373888 MCM7P33993 719 aa16.63■□□□□ 0.25
SMPDL3B-201ENST00000373888 UBXN2AP68543 259 aa16.63■□□□□ 0.25
SMPDL3B-201ENST00000373888 XRRA1Q6P2D8 792 aa16.63■□□□□ 0.25
SMPDL3B-201ENST00000373888 TMEM87AQ8NBN3 555 aa16.63■□□□□ 0.25
SMPDL3B-201ENST00000373888 ADD3Q9UEY8 706 aaKnown RBP16.63■□□□□ 0.25
SMPDL3B-201ENST00000373888 ELP1O95163 1332 aa16.62■□□□□ 0.25
SMPDL3B-201ENST00000373888 SOWAHBA6NEL2 793 aa16.62■□□□□ 0.25
SMPDL3B-201ENST00000373888 TDP2O95551 362 aa16.62■□□□□ 0.25
SMPDL3B-201ENST00000373888 PGK2P07205 417 aa16.62■□□□□ 0.25
SMPDL3B-201ENST00000373888 ADORA2AP29274 412 aa16.62■□□□□ 0.25
SMPDL3B-201ENST00000373888 STK38Q15208 465 aa16.62■□□□□ 0.25
SMPDL3B-201ENST00000373888 CSPP1Q1MSJ5 1256 aa16.62■□□□□ 0.25
SMPDL3B-201ENST00000373888 IL31RAQ8NI17 732 aa16.62■□□□□ 0.25
SMPDL3B-201ENST00000373888 KCNG4Q8TDN1 519 aa16.62■□□□□ 0.25
SMPDL3B-201ENST00000373888 SPATA32Q96LK8 384 aa16.62■□□□□ 0.25
SMPDL3B-201ENST00000373888 FGD4Q96M96 766 aa16.62■□□□□ 0.25
SMPDL3B-201ENST00000373888 IWS1Q96ST2 819 aa16.62■□□□□ 0.25
SMPDL3B-201ENST00000373888 GDPD2Q9HCC8 539 aa16.62■□□□□ 0.25
SMPDL3B-201ENST00000373888 LMBRD1Q9NUN5 540 aa16.62■□□□□ 0.25
SMPDL3B-201ENST00000373888 DDX49Q9Y6V7 483 aaKnown RBP16.62■□□□□ 0.25
SMPDL3B-201ENST00000373888 LOC102724159A0A0B4J2E5 919 aa16.61■□□□□ 0.25
SMPDL3B-201ENST00000373888 FAM86B1E9PN63 330 aa16.61■□□□□ 0.25
SMPDL3B-201ENST00000373888 SPTLC2O15270 562 aa16.61■□□□□ 0.25
SMPDL3B-201ENST00000373888 MBD3O95983 291 aa16.61■□□□□ 0.25
SMPDL3B-201ENST00000373888 NR3C2P08235 984 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms