RNA–Protein interactions for RNA: ENST00000373711.3

CDKN1A-202, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDKN1A, Length 793 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-202ENST00000373711 DCAF4Q8WV16 495 aa17.53■□□□□ 0.4
CDKN1A-202ENST00000373711 UBE2ZQ9H832 354 aaPredicted RBP17.53■□□□□ 0.4
CDKN1A-202ENST00000373711 C11orf16Q9NQ32 467 aa17.53■□□□□ 0.4
CDKN1A-202ENST00000373711 DDX49Q9Y6V7 483 aaKnown RBP17.53■□□□□ 0.4
CDKN1A-202ENST00000373711 A6NJR5 290 aa17.52■□□□□ 0.4
CDKN1A-202ENST00000373711 LPXNO60711 386 aa17.52■□□□□ 0.4
CDKN1A-202ENST00000373711 WDR5P61964 334 aaKnown RBP17.52■□□□□ 0.4
CDKN1A-202ENST00000373711 PPARAQ07869 468 aa17.52■□□□□ 0.4
CDKN1A-202ENST00000373711 PUS10Q3MIT2 529 aaKnown RBP17.52■□□□□ 0.4
CDKN1A-202ENST00000373711 TMEM63BQ5T3F8 832 aa17.52■□□□□ 0.4
CDKN1A-202ENST00000373711 GDPD5Q8WTR4 605 aa17.52■□□□□ 0.4
CDKN1A-202ENST00000373711 TGS1Q96RS0 853 aaKnown RBP17.52■□□□□ 0.4
CDKN1A-202ENST00000373711 CRBNQ96SW2 442 aa17.52■□□□□ 0.4
CDKN1A-202ENST00000373711 RANBP17Q9H2T7 1088 aaKnown RBP17.52■□□□□ 0.4
CDKN1A-202ENST00000373711 ARHGEF15O94989 841 aa17.51■□□□□ 0.39
CDKN1A-202ENST00000373711 SSTR3P32745 418 aaPredicted RBP17.51■□□□□ 0.39
CDKN1A-202ENST00000373711 PTGISQ16647 500 aa17.51■□□□□ 0.39
CDKN1A-202ENST00000373711 LEXMQ3ZCV2 418 aa17.51■□□□□ 0.39
CDKN1A-202ENST00000373711 CNKSR3Q6P9H4 555 aa17.51■□□□□ 0.39
CDKN1A-202ENST00000373711 ALYREFQ86V81 257 aaKnown RBP17.51■□□□□ 0.39
CDKN1A-202ENST00000373711 GJD3Q8N144 294 aa17.51■□□□□ 0.39
CDKN1A-202ENST00000373711 DNERQ8NFT8 737 aa17.51■□□□□ 0.39
CDKN1A-202ENST00000373711 ABHD14A-ACY1A0A1B0GW23 586 aa17.5■□□□□ 0.39
CDKN1A-202ENST00000373711 M0R2C6 588 aa17.5■□□□□ 0.39
CDKN1A-202ENST00000373711 SELPP16109 830 aa17.5■□□□□ 0.39
CDKN1A-202ENST00000373711 RRP1P56182 461 aaKnown RBP17.5■□□□□ 0.39
CDKN1A-202ENST00000373711 SNAP25P60880 206 aa17.5■□□□□ 0.39
CDKN1A-202ENST00000373711 RNF207Q6ZRF8 634 aa17.5■□□□□ 0.39
CDKN1A-202ENST00000373711 FAM178BQ8IXR5 827 aa17.5■□□□□ 0.39
CDKN1A-202ENST00000373711 KHSRPQ92945 711 aaKnown RBP eCLIP17.5■□□□□ 0.39
CDKN1A-202ENST00000373711 CHMP4CQ96CF2 233 aa17.5■□□□□ 0.39
CDKN1A-202ENST00000373711 PURBQ96QR8 312 aaKnown RBP17.5■□□□□ 0.39
CDKN1A-202ENST00000373711 RAD9AQ99638 391 aa17.5■□□□□ 0.39
CDKN1A-202ENST00000373711 KCNH6Q9H252 994 aa17.5■□□□□ 0.39
CDKN1A-202ENST00000373711 CTNNA3Q9UI47 895 aa17.5■□□□□ 0.39
CDKN1A-202ENST00000373711 KIAA1217Q5T5P2 1943 aa17.49■□□□□ 0.39
CDKN1A-202ENST00000373711 GJB5O95377 273 aa17.49■□□□□ 0.39
CDKN1A-202ENST00000373711 TXNP10599 105 aaKnown RBP17.49■□□□□ 0.39
CDKN1A-202ENST00000373711 CALML3P27482 149 aa17.49■□□□□ 0.39
CDKN1A-202ENST00000373711 ERVK-21P61565 698 aa17.49■□□□□ 0.39
CDKN1A-202ENST00000373711 SYDE2Q5VT97 1194 aa17.49■□□□□ 0.39
CDKN1A-202ENST00000373711 LRRC8DQ7L1W4 858 aa17.49■□□□□ 0.39
CDKN1A-202ENST00000373711 SESTD1Q86VW0 696 aa17.49■□□□□ 0.39
CDKN1A-202ENST00000373711 MTMR7Q9Y216 660 aa17.49■□□□□ 0.39
CDKN1A-202ENST00000373711 FAM50BQ9Y247 325 aa17.49■□□□□ 0.39
CDKN1A-202ENST00000373711 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.48■□□□□ 0.39
CDKN1A-202ENST00000373711 LCHNA4D1U4 455 aa17.48■□□□□ 0.39
CDKN1A-202ENST00000373711 NFIBO00712 420 aa17.48■□□□□ 0.39
CDKN1A-202ENST00000373711 KCNA5P22460 613 aa17.48■□□□□ 0.39
CDKN1A-202ENST00000373711 CHMP4BP1P59074 171 aa17.48■□□□□ 0.39
CDKN1A-202ENST00000373711 BTNL9Q6UXG8 535 aa17.48■□□□□ 0.39
CDKN1A-202ENST00000373711 UIMC1Q96RL1 719 aa17.48■□□□□ 0.39
CDKN1A-202ENST00000373711 SUGCTQ9HAC7 445 aa17.48■□□□□ 0.39
CDKN1A-202ENST00000373711 MICAL3Q7RTP6 2002 aa17.47■□□□□ 0.39
CDKN1A-202ENST00000373711 SMARCA5O60264 1052 aaPredicted RBP17.47■□□□□ 0.39
CDKN1A-202ENST00000373711 EDNRBP24530 442 aa17.47■□□□□ 0.39
CDKN1A-202ENST00000373711 RBL2Q08999 1139 aa17.47■□□□□ 0.39
CDKN1A-202ENST00000373711 IKBKEQ14164 716 aa17.47■□□□□ 0.39
CDKN1A-202ENST00000373711 PTPROQ16827 1216 aa17.47■□□□□ 0.39
CDKN1A-202ENST00000373711 SLC30A10Q6XR72 485 aa17.47■□□□□ 0.39
CDKN1A-202ENST00000373711 KATNAL1Q9BW62 490 aa17.47■□□□□ 0.39
CDKN1A-202ENST00000373711 CD320Q9NPF0 282 aa17.47■□□□□ 0.39
CDKN1A-202ENST00000373711 MTUS1Q9ULD2 1270 aa17.47■□□□□ 0.39
CDKN1A-202ENST00000373711 LINC01553A4QN01 128 aa17.46■□□□□ 0.39
CDKN1A-202ENST00000373711 RANBP6O60518 1105 aaKnown RBP17.46■□□□□ 0.39
CDKN1A-202ENST00000373711 CXCL10P02778 98 aa17.46■□□□□ 0.39
CDKN1A-202ENST00000373711 DEFB103AP81534 67 aa17.46■□□□□ 0.39
CDKN1A-202ENST00000373711 TIGD5Q53EQ6 642 aa17.46■□□□□ 0.39
CDKN1A-202ENST00000373711 PTCRAQ6ISU1 281 aaPredicted RBP17.46■□□□□ 0.39
CDKN1A-202ENST00000373711 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.46■□□□□ 0.39
CDKN1A-202ENST00000373711 WDR19Q8NEZ3 1342 aa17.46■□□□□ 0.38
CDKN1A-202ENST00000373711 GH1P01241 217 aa17.45■□□□□ 0.38
CDKN1A-202ENST00000373711 CASTP20810 708 aaKnown RBP17.45■□□□□ 0.38
CDKN1A-202ENST00000373711 MRE11P49959 708 aa17.45■□□□□ 0.38
CDKN1A-202ENST00000373711 RPS6P62753 249 aaKnown RBP17.45■□□□□ 0.38
CDKN1A-202ENST00000373711 C20orf194Q5TEA3 1177 aa17.45■□□□□ 0.38
CDKN1A-202ENST00000373711 SPRED2Q7Z698 418 aa17.45■□□□□ 0.38
CDKN1A-202ENST00000373711 FBXO22Q8NEZ5 403 aa17.45■□□□□ 0.38
CDKN1A-202ENST00000373711 COPS5Q92905 334 aa17.45■□□□□ 0.38
CDKN1A-202ENST00000373711 SAMD11Q96NU1 681 aa17.45■□□□□ 0.38
CDKN1A-202ENST00000373711 MAF1Q9H063 256 aa17.45■□□□□ 0.38
CDKN1A-202ENST00000373711 IL17RBQ9NRM6 502 aa17.45■□□□□ 0.38
CDKN1A-202ENST00000373711 INSL6Q9Y581 213 aa17.45■□□□□ 0.38
CDKN1A-202ENST00000373711 NLRC5Q86WI3 1866 aa17.45■□□□□ 0.38
CDKN1A-202ENST00000373711 MYH6P13533 1939 aa17.45■□□□□ 0.38
CDKN1A-202ENST00000373711 DCXO43602 365 aa17.44■□□□□ 0.38
CDKN1A-202ENST00000373711 MMP3P08254 477 aa17.44■□□□□ 0.38
CDKN1A-202ENST00000373711 TOP1P11387 765 aaKnown RBP17.44■□□□□ 0.38
CDKN1A-202ENST00000373711 CKBP12277 381 aa17.44■□□□□ 0.38
CDKN1A-202ENST00000373711 SLC16A2P36021 539 aa17.44■□□□□ 0.38
CDKN1A-202ENST00000373711 NOVP48745 357 aa17.44■□□□□ 0.38
CDKN1A-202ENST00000373711 IRX6P78412 446 aaPredicted RBP17.44■□□□□ 0.38
CDKN1A-202ENST00000373711 GDF6Q6KF10 455 aaPredicted RBP17.44■□□□□ 0.38
CDKN1A-202ENST00000373711 C7orf31Q8N865 590 aa17.44■□□□□ 0.38
CDKN1A-202ENST00000373711 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.44■□□□□ 0.38
CDKN1A-202ENST00000373711 PPP1R13LQ8WUF5 828 aa17.44■□□□□ 0.38
CDKN1A-202ENST00000373711 FSD1Q9BTV5 496 aa17.44■□□□□ 0.38
CDKN1A-202ENST00000373711 TTC41PQ6P2S7 1318 aa17.44■□□□□ 0.38
CDKN1A-202ENST00000373711 EMSYQ7Z589 1322 aa17.44■□□□□ 0.38
CDKN1A-202ENST00000373711 RALGAPA2Q2PPJ7 1873 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 1743.8 ms