RNA–Protein interactions for RNA: ENST00000373560.6

HDAC8-204, Transcript of histone deacetylase 8, humanhuman

TSL 3 BASIC

Gene HDAC8, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-204ENST00000373560 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.82□□□□□ -0.04
HDAC8-204ENST00000373560 NSUN3Q9H649 340 aaKnown RBP14.82□□□□□ -0.04
HDAC8-204ENST00000373560 DCP1AQ9NPI6 582 aaPredicted RBP14.82□□□□□ -0.04
HDAC8-204ENST00000373560 BAHCC1Q9P281 2608 aa14.82□□□□□ -0.04
HDAC8-204ENST00000373560 CFAP47Q6ZTR5 3102 aa14.81□□□□□ -0.04
HDAC8-204ENST00000373560 ATP2A1O14983 1001 aa14.81□□□□□ -0.04
HDAC8-204ENST00000373560 KDM4AO75164 1064 aa14.81□□□□□ -0.04
HDAC8-204ENST00000373560 CNKSR3Q6P9H4 555 aa14.81□□□□□ -0.04
HDAC8-204ENST00000373560 RMDN1Q96DB5 314 aa14.81□□□□□ -0.04
HDAC8-204ENST00000373560 CRBNQ96SW2 442 aa14.81□□□□□ -0.04
HDAC8-204ENST00000373560 A1CFQ9NQ94 594 aaKnown RBP14.81□□□□□ -0.04
HDAC8-204ENST00000373560 DBNLQ9UJU6 430 aaKnown RBP14.81□□□□□ -0.04
HDAC8-204ENST00000373560 MAGEB6P1A0A0J9YX57 407 aa14.8□□□□□ -0.04
HDAC8-204ENST00000373560 E9PSI1 815 aa14.8□□□□□ -0.04
HDAC8-204ENST00000373560 CSPG5O95196 566 aa14.8□□□□□ -0.04
HDAC8-204ENST00000373560 NBL1P41271 181 aa14.8□□□□□ -0.04
HDAC8-204ENST00000373560 SMAD4Q13485 552 aaKnown RBP14.8□□□□□ -0.04
HDAC8-204ENST00000373560 GPM6BQ13491 265 aa14.8□□□□□ -0.04
HDAC8-204ENST00000373560 PKN1Q16512 942 aa14.8□□□□□ -0.04
HDAC8-204ENST00000373560 PTPROQ16827 1216 aa14.8□□□□□ -0.04
HDAC8-204ENST00000373560 CCDC158Q5M9N0 1113 aa14.8□□□□□ -0.04
HDAC8-204ENST00000373560 FRMD5Q7Z6J6 570 aa14.8□□□□□ -0.04
HDAC8-204ENST00000373560 ADSSL1Q8N142 457 aa14.8□□□□□ -0.04
HDAC8-204ENST00000373560 LCORLQ8N3X6 602 aa14.8□□□□□ -0.04
HDAC8-204ENST00000373560 KIFC2Q96AC6 838 aa14.8□□□□□ -0.04
HDAC8-204ENST00000373560 MTG1Q9BT17 334 aaPredicted RBP14.8□□□□□ -0.04
HDAC8-204ENST00000373560 SLC38A10Q9HBR0 1119 aa14.8□□□□□ -0.04
HDAC8-204ENST00000373560 GOPCQ9HD26 462 aa14.8□□□□□ -0.04
HDAC8-204ENST00000373560 H3BNC9 293 aa14.79□□□□□ -0.04
HDAC8-204ENST00000373560 NDUFB10O96000 172 aa14.79□□□□□ -0.04
HDAC8-204ENST00000373560 CXCL10P02778 98 aa14.79□□□□□ -0.04
HDAC8-204ENST00000373560 CDK8P49336 464 aa14.79□□□□□ -0.04
HDAC8-204ENST00000373560 BFSP2Q13515 415 aa14.79□□□□□ -0.04
HDAC8-204ENST00000373560 SWAP70Q9UH65 585 aa14.79□□□□□ -0.04
HDAC8-204ENST00000373560 Q9Y3F1 56 aa14.79□□□□□ -0.04
HDAC8-204ENST00000373560 LOC730098B7Z3J9 87 aa14.78□□□□□ -0.04
HDAC8-204ENST00000373560 PRKAB2O43741 272 aa14.78□□□□□ -0.04
HDAC8-204ENST00000373560 HTRA4P83105 476 aaPredicted RBP14.78□□□□□ -0.04
HDAC8-204ENST00000373560 SIGLEC14Q08ET2 396 aa14.78□□□□□ -0.04
HDAC8-204ENST00000373560 MBTPS1Q14703 1052 aa14.78□□□□□ -0.04
HDAC8-204ENST00000373560 SLFNL1Q499Z3 407 aa14.78□□□□□ -0.04
HDAC8-204ENST00000373560 IQSEC1Q6DN90 963 aa14.78□□□□□ -0.04
HDAC8-204ENST00000373560 TRAF7Q6Q0C0 670 aa14.78□□□□□ -0.04
HDAC8-204ENST00000373560 TMEM92Q6UXU6 159 aa14.78□□□□□ -0.04
HDAC8-204ENST00000373560 KIAA1211Q6ZU35 1233 aa14.78□□□□□ -0.04
HDAC8-204ENST00000373560 LRRC8DQ7L1W4 858 aa14.78□□□□□ -0.04
HDAC8-204ENST00000373560 CERS3Q8IU89 383 aa14.78□□□□□ -0.04
HDAC8-204ENST00000373560 CHST13Q8NET6 341 aa14.78□□□□□ -0.04
HDAC8-204ENST00000373560 TMC2Q8TDI7 906 aa14.78□□□□□ -0.04
HDAC8-204ENST00000373560 WNT8BQ93098 351 aa14.78□□□□□ -0.04
HDAC8-204ENST00000373560 ZNF512BQ96KM6 892 aaPredicted RBP14.78□□□□□ -0.04
HDAC8-204ENST00000373560 POLR3EQ9NVU0 708 aa14.78□□□□□ -0.04
HDAC8-204ENST00000373560 ZNF292O60281 2723 aa14.78□□□□□ -0.04
HDAC8-204ENST00000373560 LGR5O75473 907 aa14.77□□□□□ -0.05
HDAC8-204ENST00000373560 G3BP1Q13283 466 aaKnown RBP eCLIP14.77□□□□□ -0.05
HDAC8-204ENST00000373560 DUSP28Q4G0W2 176 aa14.77□□□□□ -0.05
HDAC8-204ENST00000373560 GDF6Q6KF10 455 aaPredicted RBP14.77□□□□□ -0.05
HDAC8-204ENST00000373560 NFRKBQ6P4R8 1299 aa14.77□□□□□ -0.05
HDAC8-204ENST00000373560 AFAP1L1Q8TED9 768 aa14.77□□□□□ -0.05
HDAC8-204ENST00000373560 COPS5Q92905 334 aa14.77□□□□□ -0.05
HDAC8-204ENST00000373560 CRNKL1Q9BZJ0 848 aaKnown RBP14.77□□□□□ -0.05
HDAC8-204ENST00000373560 CCDC8Q9H0W5 538 aaPredicted RBP14.77□□□□□ -0.05
HDAC8-204ENST00000373560 CTNNA3Q9UI47 895 aa14.77□□□□□ -0.05
HDAC8-204ENST00000373560 WDR87Q6ZQQ6 2873 aa14.76□□□□□ -0.05
HDAC8-204ENST00000373560 ABHD14A-ACY1A0A1B0GW23 586 aa14.76□□□□□ -0.05
HDAC8-204ENST00000373560 ASB14A6NK59 587 aa14.76□□□□□ -0.05
HDAC8-204ENST00000373560 ZBED4O75132 1171 aa14.76□□□□□ -0.05
HDAC8-204ENST00000373560 ARP10275 920 aa14.76□□□□□ -0.05
HDAC8-204ENST00000373560 SELPP16109 830 aa14.76□□□□□ -0.05
HDAC8-204ENST00000373560 CHMP4BP1P59074 171 aa14.76□□□□□ -0.05
HDAC8-204ENST00000373560 PTGISQ16647 500 aa14.76□□□□□ -0.05
HDAC8-204ENST00000373560 LRRFIP1Q32MZ4 808 aaKnown RBP14.76□□□□□ -0.05
HDAC8-204ENST00000373560 PRPF38AQ8NAV1 312 aaKnown RBP14.76□□□□□ -0.05
HDAC8-204ENST00000373560 OR6J1Q8NGC5 347 aa14.76□□□□□ -0.05
HDAC8-204ENST00000373560 ACAD9Q9H845 621 aa14.76□□□□□ -0.05
HDAC8-204ENST00000373560 GPR108Q9NPR9 543 aa14.76□□□□□ -0.05
HDAC8-204ENST00000373560 SMC4Q9NTJ3 1288 aa14.76□□□□□ -0.05
HDAC8-204ENST00000373560 RNF146Q9NTX7 359 aa14.76□□□□□ -0.05
HDAC8-204ENST00000373560 FBXO40Q9UH90 709 aa14.76□□□□□ -0.05
HDAC8-204ENST00000373560 CD207Q9UJ71 328 aa14.76□□□□□ -0.05
HDAC8-204ENST00000373560 INSL6Q9Y581 213 aa14.76□□□□□ -0.05
HDAC8-204ENST00000373560 F5H6K3 240 aa14.75□□□□□ -0.05
HDAC8-204ENST00000373560 PDE6AP16499 860 aa14.75□□□□□ -0.05
HDAC8-204ENST00000373560 KLRC3Q07444 240 aa14.75□□□□□ -0.05
HDAC8-204ENST00000373560 MUM1L1Q5H9M0 696 aa14.75□□□□□ -0.05
HDAC8-204ENST00000373560 C16orf86Q6ZW13 317 aa14.75□□□□□ -0.05
HDAC8-204ENST00000373560 FBXO11Q86XK2 927 aa14.75□□□□□ -0.05
HDAC8-204ENST00000373560 TMEM192Q8IY95 271 aa14.75□□□□□ -0.05
HDAC8-204ENST00000373560 MYOCDQ8IZQ8 938 aa14.75□□□□□ -0.05
HDAC8-204ENST00000373560 TMEM105Q8N8V8 129 aa14.75□□□□□ -0.05
HDAC8-204ENST00000373560 MSLNLQ96KJ4 702 aa14.75□□□□□ -0.05
HDAC8-204ENST00000373560 IRF2BPLQ9H1B7 796 aa14.75□□□□□ -0.05
HDAC8-204ENST00000373560 IGFLR1Q9H665 355 aa14.75□□□□□ -0.05
HDAC8-204ENST00000373560 ARMT1Q9H993 441 aa14.75□□□□□ -0.05
HDAC8-204ENST00000373560 KANSL2Q9H9L4 492 aa14.75□□□□□ -0.05
HDAC8-204ENST00000373560 RALYQ9UKM9 306 aaKnown RBP14.75□□□□□ -0.05
HDAC8-204ENST00000373560 NOB1Q9ULX3 412 aaKnown RBP14.75□□□□□ -0.05
HDAC8-204ENST00000373560 NOD1Q9Y239 953 aa14.75□□□□□ -0.05
HDAC8-204ENST00000373560 COG6Q9Y2V7 657 aa14.75□□□□□ -0.05
HDAC8-204ENST00000373560 KIAA1671Q9BY89 1806 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms