RNA–Protein interactions for RNA: ENST00000373554.5

HDAC8-201, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 833 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-201ENST00000373554 CUL5Q93034 780 aa13.86□□□□□ -0.19
HDAC8-201ENST00000373554 PXMP2Q9NR77 195 aa13.86□□□□□ -0.19
HDAC8-201ENST00000373554 MKI67P46013 3256 aaKnown RBP13.85□□□□□ -0.19
HDAC8-201ENST00000373554 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.85□□□□□ -0.19
HDAC8-201ENST00000373554 hCG_1984214I3L0E3 225 aa13.85□□□□□ -0.19
HDAC8-201ENST00000373554 ADCY6O43306 1168 aa13.85□□□□□ -0.19
HDAC8-201ENST00000373554 EVI5O60447 810 aa13.85□□□□□ -0.19
HDAC8-201ENST00000373554 SEC24BO95487 1268 aa13.85□□□□□ -0.19
HDAC8-201ENST00000373554 C6orf222P0C671 652 aaPredicted RBP13.85□□□□□ -0.19
HDAC8-201ENST00000373554 ADD1P35611 737 aaKnown RBP13.85□□□□□ -0.19
HDAC8-201ENST00000373554 STXBP2Q15833 593 aa13.85□□□□□ -0.19
HDAC8-201ENST00000373554 TAPT1Q6NXT6 567 aa13.85□□□□□ -0.19
HDAC8-201ENST00000373554 TLK2Q86UE8 772 aa13.85□□□□□ -0.19
HDAC8-201ENST00000373554 FCHSD1Q86WN1 690 aa13.85□□□□□ -0.19
HDAC8-201ENST00000373554 ZNF713Q8N859 430 aaPredicted RBP13.85□□□□□ -0.19
HDAC8-201ENST00000373554 SMARCC2Q8TAQ2 1214 aa13.85□□□□□ -0.19
HDAC8-201ENST00000373554 SCFD2Q8WU76 684 aa13.85□□□□□ -0.19
HDAC8-201ENST00000373554 GPKOWQ92917 476 aaPredicted RBP eCLIP13.85□□□□□ -0.19
HDAC8-201ENST00000373554 SENP6Q9GZR1 1112 aaPredicted RBP13.85□□□□□ -0.19
HDAC8-201ENST00000373554 PDGFCQ9NRA1 345 aa13.85□□□□□ -0.19
HDAC8-201ENST00000373554 FAM217BQ9NTX9 383 aaPredicted RBP13.85□□□□□ -0.19
HDAC8-201ENST00000373554 RBM27Q9P2N5 1060 aaKnown RBP13.85□□□□□ -0.19
HDAC8-201ENST00000373554 V9GY48 417 aaPredicted RBP13.85□□□□□ -0.19
HDAC8-201ENST00000373554 SMPD1P17405 629 aa13.84□□□□□ -0.19
HDAC8-201ENST00000373554 CST5P28325 142 aaPredicted RBP13.84□□□□□ -0.19
HDAC8-201ENST00000373554 PDIA3P30101 505 aaKnown RBP13.84□□□□□ -0.19
HDAC8-201ENST00000373554 NAPAP54920 295 aa13.84□□□□□ -0.19
HDAC8-201ENST00000373554 GJA9P57773 515 aa13.84□□□□□ -0.19
HDAC8-201ENST00000373554 AKAP17AQ02040 695 aaKnown RBP13.84□□□□□ -0.19
HDAC8-201ENST00000373554 FUT2Q10981 343 aa13.84□□□□□ -0.19
HDAC8-201ENST00000373554 PPP1R18Q6NYC8 613 aa13.84□□□□□ -0.19
HDAC8-201ENST00000373554 IL17RAQ96F46 866 aa13.84□□□□□ -0.19
HDAC8-201ENST00000373554 PDCD2LQ9BRP1 358 aa13.84□□□□□ -0.19
HDAC8-201ENST00000373554 WDR11Q9BZH6 1224 aa13.84□□□□□ -0.19
HDAC8-201ENST00000373554 AP5M1Q9H0R1 490 aa13.84□□□□□ -0.19
HDAC8-201ENST00000373554 UPF3AQ9H1J1 476 aaKnown RBP13.84□□□□□ -0.19
HDAC8-201ENST00000373554 PSTPIP2Q9H939 334 aa13.84□□□□□ -0.19
HDAC8-201ENST00000373554 PHF24Q9UPV7 400 aa13.84□□□□□ -0.19
HDAC8-201ENST00000373554 NR2E3Q9Y5X4 410 aa13.84□□□□□ -0.19
HDAC8-201ENST00000373554 RBM47A0AV96 593 aaKnown RBP13.83□□□□□ -0.2
HDAC8-201ENST00000373554 MOXD2PA6NHM9 499 aa13.83□□□□□ -0.2
HDAC8-201ENST00000373554 PIK3CDO00329 1044 aa13.83□□□□□ -0.2
HDAC8-201ENST00000373554 CPLX1O14810 134 aa13.83□□□□□ -0.2
HDAC8-201ENST00000373554 EIF3JO75822 258 aaKnown RBP13.83□□□□□ -0.2
HDAC8-201ENST00000373554 NR3C2P08235 984 aa13.83□□□□□ -0.2
HDAC8-201ENST00000373554 CCT2P78371 535 aaKnown RBP13.83□□□□□ -0.2
HDAC8-201ENST00000373554 TTLL4Q14679 1199 aa13.83□□□□□ -0.2
HDAC8-201ENST00000373554 ANKRD1Q15327 319 aa13.83□□□□□ -0.2
HDAC8-201ENST00000373554 DUSP28Q4G0W2 176 aa13.83□□□□□ -0.2
HDAC8-201ENST00000373554 WWC2Q6AWC2 1192 aa13.83□□□□□ -0.2
HDAC8-201ENST00000373554 PCSK9Q8NBP7 692 aaKnown RBP13.83□□□□□ -0.2
HDAC8-201ENST00000373554 ZNF274Q96GC6 653 aaPredicted RBP13.83□□□□□ -0.2
HDAC8-201ENST00000373554 TSEN34Q9BSV6 310 aaKnown RBP13.83□□□□□ -0.2
HDAC8-201ENST00000373554 GNEQ9Y223 722 aaKnown RBP13.83□□□□□ -0.2
HDAC8-201ENST00000373554 Q9Y3F1 56 aa13.83□□□□□ -0.2
HDAC8-201ENST00000373554 MYADML2A6NDP7 307 aa13.82□□□□□ -0.2
HDAC8-201ENST00000373554 NKRFO15226 690 aaKnown RBP eCLIP13.82□□□□□ -0.2
HDAC8-201ENST00000373554 DYNC1LI2O43237 492 aaPredicted RBP13.82□□□□□ -0.2
HDAC8-201ENST00000373554 MYCLP12524 364 aaPredicted RBP13.82□□□□□ -0.2
HDAC8-201ENST00000373554 CCND2P30279 289 aa13.82□□□□□ -0.2
HDAC8-201ENST00000373554 ACLYP53396 1101 aa13.82□□□□□ -0.2
HDAC8-201ENST00000373554 ATN1P54259 1190 aaPredicted RBP13.82□□□□□ -0.2
HDAC8-201ENST00000373554 PGM5Q15124 567 aa13.82□□□□□ -0.2
HDAC8-201ENST00000373554 PFKFB3Q16875 520 aaPredicted RBP13.82□□□□□ -0.2
HDAC8-201ENST00000373554 GNASQ5JWF2 1037 aa13.82□□□□□ -0.2
HDAC8-201ENST00000373554 CPLX2Q6PUV4 134 aaKnown RBP13.82□□□□□ -0.2
HDAC8-201ENST00000373554 USP17L6PQ6QN14 398 aa13.82□□□□□ -0.2
HDAC8-201ENST00000373554 SEPT14Q6ZU15 432 aa13.82□□□□□ -0.2
HDAC8-201ENST00000373554 TRIM22Q8IYM9 498 aa13.82□□□□□ -0.2
HDAC8-201ENST00000373554 C7orf61Q8IZ16 206 aa13.82□□□□□ -0.2
HDAC8-201ENST00000373554 KLHDC9Q8NEP7 349 aa13.82□□□□□ -0.2
HDAC8-201ENST00000373554 FERMT2Q96AC1 680 aa13.82□□□□□ -0.2
HDAC8-201ENST00000373554 RNF26Q9BY78 433 aaPredicted RBP13.82□□□□□ -0.2
HDAC8-201ENST00000373554 UPF2Q9HAU5 1272 aaKnown RBP13.82□□□□□ -0.2
HDAC8-201ENST00000373554 NCOA5Q9HCD5 579 aaKnown RBP13.82□□□□□ -0.2
HDAC8-201ENST00000373554 BARHL2Q9NY43 387 aa13.82□□□□□ -0.2
HDAC8-201ENST00000373554 FRMPD4Q14CM0 1322 aa13.82□□□□□ -0.2
HDAC8-201ENST00000373554 A0A1W2PQ45 241 aaPredicted RBP13.81□□□□□ -0.2
HDAC8-201ENST00000373554 A0A1W2PQY0 241 aa13.81□□□□□ -0.2
HDAC8-201ENST00000373554 SPDYE3A6NKU9 549 aa13.81□□□□□ -0.2
HDAC8-201ENST00000373554 STXBP3O00186 592 aa13.81□□□□□ -0.2
HDAC8-201ENST00000373554 MEIS2O14770 477 aa13.81□□□□□ -0.2
HDAC8-201ENST00000373554 ZEB2O60315 1214 aa13.81□□□□□ -0.2
HDAC8-201ENST00000373554 TXNP10599 105 aaKnown RBP13.81□□□□□ -0.2
HDAC8-201ENST00000373554 SCG2P13521 617 aa13.81□□□□□ -0.2
HDAC8-201ENST00000373554 IFNAR1P17181 557 aa13.81□□□□□ -0.2
HDAC8-201ENST00000373554 ADCY7P51828 1080 aa13.81□□□□□ -0.2
HDAC8-201ENST00000373554 NKX3-2P78367 333 aa13.81□□□□□ -0.2
HDAC8-201ENST00000373554 STK3Q13188 491 aa13.81□□□□□ -0.2
HDAC8-201ENST00000373554 KCNA10Q16322 511 aa13.81□□□□□ -0.2
HDAC8-201ENST00000373554 FSCN1Q16658 493 aaKnown RBP13.81□□□□□ -0.2
HDAC8-201ENST00000373554 LRRC26Q2I0M4 334 aa13.81□□□□□ -0.2
HDAC8-201ENST00000373554 TEX2Q8IWB9 1127 aa13.81□□□□□ -0.2
HDAC8-201ENST00000373554 OR6J1Q8NGC5 347 aa13.81□□□□□ -0.2
HDAC8-201ENST00000373554 IL31RAQ8NI17 732 aa13.81□□□□□ -0.2
HDAC8-201ENST00000373554 CCDC12Q8WUD4 166 aaPredicted RBP13.81□□□□□ -0.2
HDAC8-201ENST00000373554 PHKBQ93100 1093 aa13.81□□□□□ -0.2
HDAC8-201ENST00000373554 GLT1D1Q96MS3 346 aa13.81□□□□□ -0.2
HDAC8-201ENST00000373554 LARP6Q9BRS8 491 aaKnown RBP13.81□□□□□ -0.2
HDAC8-201ENST00000373554 SLC26A6Q9BXS9 759 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms