RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 PCCAP05165 728 aaPredicted RBP12.55□□□□□ -0.4
VCL-202ENST00000372755 CDR2Q01850 454 aa12.55□□□□□ -0.4
VCL-202ENST00000372755 RETREG2Q8NC44 543 aa12.55□□□□□ -0.4
VCL-202ENST00000372755 FAF1Q9UNN5 650 aaPredicted RBP12.55□□□□□ -0.4
VCL-202ENST00000372755 PCDHA1Q9Y5I3 950 aa12.55□□□□□ -0.4
VCL-202ENST00000372755 A0A0D9SFI3 127 aa12.55□□□□□ -0.4
VCL-202ENST00000372755 HEXIM1O94992 359 aaKnown RBP12.55□□□□□ -0.4
VCL-202ENST00000372755 IGBP1P78318 339 aa12.55□□□□□ -0.4
VCL-202ENST00000372755 GUCY2DQ02846 1103 aa12.55□□□□□ -0.4
VCL-202ENST00000372755 CCDC17Q96LX7 622 aa12.55□□□□□ -0.4
VCL-202ENST00000372755 RRAGDQ9NQL2 400 aaPredicted RBP12.55□□□□□ -0.4
VCL-202ENST00000372755 SLC12A6Q9UHW9 1150 aa12.55□□□□□ -0.4
VCL-202ENST00000372755 WDR17Q8IZU2 1322 aa12.55□□□□□ -0.4
VCL-202ENST00000372755 HNRNPDLO14979 420 aaKnown RBP12.55□□□□□ -0.4
VCL-202ENST00000372755 CASP2P42575 452 aa12.55□□□□□ -0.4
VCL-202ENST00000372755 SESN3P58005 492 aa12.55□□□□□ -0.4
VCL-202ENST00000372755 PTPROQ16827 1216 aa12.55□□□□□ -0.4
VCL-202ENST00000372755 ASPRV1Q53RT3 343 aa12.55□□□□□ -0.4
VCL-202ENST00000372755 TMTC4Q5T4D3 741 aa12.55□□□□□ -0.4
VCL-202ENST00000372755 AK8Q96MA6 479 aa12.55□□□□□ -0.4
VCL-202ENST00000372755 ACCSQ96QU6 501 aa12.55□□□□□ -0.4
VCL-202ENST00000372755 USP21Q9UK80 565 aa12.55□□□□□ -0.4
VCL-202ENST00000372755 EHHADHQ08426 723 aa12.54□□□□□ -0.4
VCL-202ENST00000372755 PTGDRQ13258 359 aa12.54□□□□□ -0.4
VCL-202ENST00000372755 SNCBQ16143 134 aa12.54□□□□□ -0.4
VCL-202ENST00000372755 GPATCH4Q5T3I0 446 aaKnown RBP12.54□□□□□ -0.4
VCL-202ENST00000372755 EP400NLQ6ZTU2 488 aa12.54□□□□□ -0.4
VCL-202ENST00000372755 SULF1Q8IWU6 871 aa12.54□□□□□ -0.4
VCL-202ENST00000372755 ABI1Q8IZP0 508 aa12.54□□□□□ -0.4
VCL-202ENST00000372755 UHMK1Q8TAS1 419 aaKnown RBP12.54□□□□□ -0.4
VCL-202ENST00000372755 GJA10Q969M2 543 aa12.54□□□□□ -0.4
VCL-202ENST00000372755 ATP6V1E2Q96A05 226 aa12.54□□□□□ -0.4
VCL-202ENST00000372755 DHTKD1Q96HY7 919 aaPredicted RBP12.54□□□□□ -0.4
VCL-202ENST00000372755 GSDMAQ96QA5 445 aa12.54□□□□□ -0.4
VCL-202ENST00000372755 DRC3Q9H069 523 aa12.54□□□□□ -0.4
VCL-202ENST00000372755 SEPT9Q9UHD8 586 aaPredicted RBP12.54□□□□□ -0.4
VCL-202ENST00000372755 ERBB4Q15303 1308 aa12.54□□□□□ -0.4
VCL-202ENST00000372755 A0A1W2PQ27 194 aa12.54□□□□□ -0.4
VCL-202ENST00000372755 A0A1W2PQ64 194 aa12.54□□□□□ -0.4
VCL-202ENST00000372755 A0A1W2PQD8 194 aa12.54□□□□□ -0.4
VCL-202ENST00000372755 POC1B-GALNT4F8VUJ3 575 aa12.54□□□□□ -0.4
VCL-202ENST00000372755 ADD1P35611 737 aaKnown RBP12.54□□□□□ -0.4
VCL-202ENST00000372755 MESDQ14696 234 aa12.54□□□□□ -0.4
VCL-202ENST00000372755 ARHGEF6Q15052 776 aa12.54□□□□□ -0.4
VCL-202ENST00000372755 UBE3CQ15386 1083 aa12.54□□□□□ -0.4
VCL-202ENST00000372755 PDCD2Q16342 344 aaPredicted RBP12.54□□□□□ -0.4
VCL-202ENST00000372755 LRCH2Q5VUJ6 765 aa12.54□□□□□ -0.4
VCL-202ENST00000372755 TAB3Q8N5C8 712 aaPredicted RBP12.54□□□□□ -0.4
VCL-202ENST00000372755 CACTINQ8WUQ7 758 aaKnown RBP12.54□□□□□ -0.4
VCL-202ENST00000372755 CNKSR1Q969H4 720 aa12.54□□□□□ -0.4
VCL-202ENST00000372755 SMYD2Q9NRG4 433 aa12.54□□□□□ -0.4
VCL-202ENST00000372755 KIAA1024Q9UPX6 916 aa12.54□□□□□ -0.4
VCL-202ENST00000372755 BCS1LQ9Y276 419 aa12.54□□□□□ -0.4
VCL-202ENST00000372755 SEMA3EO15041 775 aa12.54□□□□□ -0.4
VCL-202ENST00000372755 TTI1O43156 1089 aa12.54□□□□□ -0.4
VCL-202ENST00000372755 CPP00450 1065 aa12.54□□□□□ -0.4
VCL-202ENST00000372755 EEF1GP26641 437 aaKnown RBP12.54□□□□□ -0.4
VCL-202ENST00000372755 BCAMP50895 628 aa12.54□□□□□ -0.4
VCL-202ENST00000372755 RASSF7Q02833 373 aa12.54□□□□□ -0.4
VCL-202ENST00000372755 ZNF827Q17R98 1081 aa12.54□□□□□ -0.4
VCL-202ENST00000372755 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.54□□□□□ -0.4
VCL-202ENST00000372755 NACC1Q96RE7 527 aa12.54□□□□□ -0.4
VCL-202ENST00000372755 SNX25Q9H3E2 840 aa12.54□□□□□ -0.4
VCL-202ENST00000372755 INTS9Q9NV88 658 aaKnown RBP12.54□□□□□ -0.4
VCL-202ENST00000372755 JRKLQ9Y4A0 524 aa12.54□□□□□ -0.4
VCL-202ENST00000372755 TMTC3Q6ZXV5 915 aa12.54□□□□□ -0.4
VCL-202ENST00000372755 CCDC197Q8NCU1 140 aa12.54□□□□□ -0.4
VCL-202ENST00000372755 MTMR6Q9Y217 621 aa12.54□□□□□ -0.4
VCL-202ENST00000372755 ATP8B3O60423 1300 aa12.54□□□□□ -0.4
VCL-202ENST00000372755 BTBD18B2RXH4 712 aa12.54□□□□□ -0.4
VCL-202ENST00000372755 hCG_1984214I3L0E3 225 aa12.54□□□□□ -0.4
VCL-202ENST00000372755 AFPP02771 609 aaKnown RBP12.54□□□□□ -0.4
VCL-202ENST00000372755 SCNN1DP51172 638 aa12.54□□□□□ -0.4
VCL-202ENST00000372755 USP14P54578 494 aa12.54□□□□□ -0.4
VCL-202ENST00000372755 IL1RL1Q01638 556 aa12.54□□□□□ -0.4
VCL-202ENST00000372755 PTH1RQ03431 593 aa12.54□□□□□ -0.4
VCL-202ENST00000372755 MIS18BP1Q6P0N0 1132 aa12.54□□□□□ -0.4
VCL-202ENST00000372755 RSRC2Q7L4I2 434 aaKnown RBP12.54□□□□□ -0.4
VCL-202ENST00000372755 ZNF713Q8N859 430 aaPredicted RBP12.54□□□□□ -0.4
VCL-202ENST00000372755 MCUQ8NE86 351 aa12.54□□□□□ -0.4
VCL-202ENST00000372755 LARP4BQ92615 738 aaKnown RBP12.54□□□□□ -0.4
VCL-202ENST00000372755 TUBGCP2Q9BSJ2 902 aa12.54□□□□□ -0.4
VCL-202ENST00000372755 CDC25BP30305 580 aa12.53□□□□□ -0.4
VCL-202ENST00000372755 MAPK4P31152 587 aa12.53□□□□□ -0.4
VCL-202ENST00000372755 CCHCR1Q8TD31 782 aa12.53□□□□□ -0.4
VCL-202ENST00000372755 MAGOHBQ96A72 148 aaKnown RBP12.53□□□□□ -0.4
VCL-202ENST00000372755 PCDHA4Q9UN74 947 aa12.53□□□□□ -0.4
VCL-202ENST00000372755 ARHGEF37A1IGU5 675 aa12.53□□□□□ -0.4
VCL-202ENST00000372755 GNGT2O14610 69 aa12.53□□□□□ -0.4
VCL-202ENST00000372755 MED7O43513 233 aa12.53□□□□□ -0.4
VCL-202ENST00000372755 PPP6R2O75170 966 aa12.53□□□□□ -0.4
VCL-202ENST00000372755 GCKP35557 465 aa12.53□□□□□ -0.4
VCL-202ENST00000372755 CHRNDQ07001 517 aa12.53□□□□□ -0.4
VCL-202ENST00000372755 CCDC124Q96CT7 223 aaKnown RBP12.53□□□□□ -0.4
VCL-202ENST00000372755 ORAI2Q96SN7 254 aa12.53□□□□□ -0.4
VCL-202ENST00000372755 SLC7A3Q8WY07 619 aa12.53□□□□□ -0.4
VCL-202ENST00000372755 PTPN22Q9Y2R2 807 aa12.53□□□□□ -0.4
VCL-202ENST00000372755 MAPKBP1O60336 1514 aa12.53□□□□□ -0.4
VCL-202ENST00000372755 ACTN1P12814 892 aa12.53□□□□□ -0.4
VCL-202ENST00000372755 HOXA7P31268 230 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms