RNA–Protein interactions for RNA: ENST00000372417.1

YIPF3-201, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 406 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-201ENST00000372417 MYOCDQ8IZQ8 938 aa9.54□□□□□ -0.88
YIPF3-201ENST00000372417 MRPL50Q8N5N7 158 aaKnown RBP9.54□□□□□ -0.88
YIPF3-201ENST00000372417 KCNG4Q8TDN1 519 aa9.54□□□□□ -0.88
YIPF3-201ENST00000372417 RPGRIP1Q96KN7 1286 aa9.54□□□□□ -0.88
YIPF3-201ENST00000372417 YME1L1Q96TA2 773 aa9.54□□□□□ -0.88
YIPF3-201ENST00000372417 PHF7Q9BWX1 381 aaPredicted RBP9.54□□□□□ -0.88
YIPF3-201ENST00000372417 VTA1Q9NP79 307 aa9.54□□□□□ -0.88
YIPF3-201ENST00000372417 PIH1D3Q9NQM4 214 aaKnown RBP9.54□□□□□ -0.88
YIPF3-201ENST00000372417 DLL3Q9NYJ7 618 aa9.54□□□□□ -0.88
YIPF3-201ENST00000372417 HDAC5Q9UQL6 1122 aa9.54□□□□□ -0.88
YIPF3-201ENST00000372417 ADAM15Q13444 863 aa9.53□□□□□ -0.88
YIPF3-201ENST00000372417 BRDTQ58F21 947 aaPredicted RBP9.53□□□□□ -0.88
YIPF3-201ENST00000372417 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.53□□□□□ -0.88
YIPF3-201ENST00000372417 PRPF38AQ8NAV1 312 aaKnown RBP9.53□□□□□ -0.88
YIPF3-201ENST00000372417 SMRP1Q8NCR6 262 aa9.53□□□□□ -0.88
YIPF3-201ENST00000372417 OR6J1Q8NGC5 347 aa9.53□□□□□ -0.88
YIPF3-201ENST00000372417 RAVER2Q9HCJ3 691 aaKnown RBP9.53□□□□□ -0.88
YIPF3-201ENST00000372417 HOMER2Q9NSB8 354 aa9.53□□□□□ -0.88
YIPF3-201ENST00000372417 MCM9Q9NXL9 1143 aa9.53□□□□□ -0.88
YIPF3-201ENST00000372417 RALYQ9UKM9 306 aaKnown RBP9.53□□□□□ -0.88
YIPF3-201ENST00000372417 COG6Q9Y2V7 657 aa9.53□□□□□ -0.88
YIPF3-201ENST00000372417 RAD50Q92878 1312 aa9.53□□□□□ -0.88
YIPF3-201ENST00000372417 KAT6AQ92794 2004 aa9.53□□□□□ -0.88
YIPF3-201ENST00000372417 IDH1O75874 414 aaKnown RBP9.52□□□□□ -0.89
YIPF3-201ENST00000372417 LMNAP02545 664 aaKnown RBP9.52□□□□□ -0.89
YIPF3-201ENST00000372417 CTNNB1P35222 781 aa9.52□□□□□ -0.89
YIPF3-201ENST00000372417 ZAP70P43403 619 aa9.52□□□□□ -0.89
YIPF3-201ENST00000372417 RBL2Q08999 1139 aa9.52□□□□□ -0.89
YIPF3-201ENST00000372417 COASYQ13057 564 aa9.52□□□□□ -0.89
YIPF3-201ENST00000372417 CCDC158Q5M9N0 1113 aa9.52□□□□□ -0.89
YIPF3-201ENST00000372417 PPP2R3CQ969Q6 453 aa9.52□□□□□ -0.89
YIPF3-201ENST00000372417 CCDC17Q96LX7 622 aa9.52□□□□□ -0.89
YIPF3-201ENST00000372417 NUP88Q99567 741 aaPredicted RBP9.52□□□□□ -0.89
YIPF3-201ENST00000372417 HINFPQ9BQA5 517 aa9.52□□□□□ -0.89
YIPF3-201ENST00000372417 ACAD9Q9H845 621 aa9.52□□□□□ -0.89
YIPF3-201ENST00000372417 SLC38A10Q9HBR0 1119 aa9.52□□□□□ -0.89
YIPF3-201ENST00000372417 USP15Q9Y4E8 981 aaPredicted RBP9.52□□□□□ -0.89
YIPF3-201ENST00000372417 PCDHGC5Q9Y5F6 944 aa9.52□□□□□ -0.89
YIPF3-201ENST00000372417 DDX49Q9Y6V7 483 aaKnown RBP9.52□□□□□ -0.89
YIPF3-201ENST00000372417 GPR179Q6PRD1 2367 aa9.51□□□□□ -0.89
YIPF3-201ENST00000372417 E9PSI1 815 aa9.51□□□□□ -0.89
YIPF3-201ENST00000372417 GRM6O15303 877 aa9.51□□□□□ -0.89
YIPF3-201ENST00000372417 SRGAP3O43295 1099 aa9.51□□□□□ -0.89
YIPF3-201ENST00000372417 KPNA6O60684 536 aa9.51□□□□□ -0.89
YIPF3-201ENST00000372417 CSPG5O95196 566 aa9.51□□□□□ -0.89
YIPF3-201ENST00000372417 CKBP12277 381 aa9.51□□□□□ -0.89
YIPF3-201ENST00000372417 OAZ1P54368 228 aa9.51□□□□□ -0.89
YIPF3-201ENST00000372417 CHMP4BP1P59074 171 aa9.51□□□□□ -0.89
YIPF3-201ENST00000372417 ASTLQ6HA08 431 aaPredicted RBP9.51□□□□□ -0.89
YIPF3-201ENST00000372417 DHX38Q92620 1227 aaKnown RBP9.51□□□□□ -0.89
YIPF3-201ENST00000372417 KIFC2Q96AC6 838 aa9.51□□□□□ -0.89
YIPF3-201ENST00000372417 DYNLL2Q96FJ2 89 aa9.51□□□□□ -0.89
YIPF3-201ENST00000372417 C11orf84Q9BUA3 381 aaPredicted RBP9.51□□□□□ -0.89
YIPF3-201ENST00000372417 WDR11Q9BZH6 1224 aa9.51□□□□□ -0.89
YIPF3-201ENST00000372417 CRNKL1Q9BZJ0 848 aaKnown RBP9.51□□□□□ -0.89
YIPF3-201ENST00000372417 SEMA4AQ9H3S1 761 aa9.51□□□□□ -0.89
YIPF3-201ENST00000372417 KANSL2Q9H9L4 492 aa9.51□□□□□ -0.89
YIPF3-201ENST00000372417 A1CFQ9NQ94 594 aaKnown RBP9.51□□□□□ -0.89
YIPF3-201ENST00000372417 ASPMQ8IZT6 3477 aa9.5□□□□□ -0.89
YIPF3-201ENST00000372417 C5orf67F2Z3F1 127 aa9.5□□□□□ -0.89
YIPF3-201ENST00000372417 LGR5O75473 907 aa9.5□□□□□ -0.89
YIPF3-201ENST00000372417 RB1P06400 928 aa9.5□□□□□ -0.89
YIPF3-201ENST00000372417 CYP2D6P10635 497 aa9.5□□□□□ -0.89
YIPF3-201ENST00000372417 RSPO4Q2I0M5 234 aaPredicted RBP9.5□□□□□ -0.89
YIPF3-201ENST00000372417 GDF6Q6KF10 455 aaPredicted RBP9.5□□□□□ -0.89
YIPF3-201ENST00000372417 UBALD2Q8IYN6 164 aa9.5□□□□□ -0.89
YIPF3-201ENST00000372417 CHAMP1Q96JM3 812 aa9.5□□□□□ -0.89
YIPF3-201ENST00000372417 CTAGE1Q96RT6 745 aa9.5□□□□□ -0.89
YIPF3-201ENST00000372417 RIOK1Q9BRS2 568 aaKnown RBP9.5□□□□□ -0.89
YIPF3-201ENST00000372417 CLEC1BQ9P126 229 aa9.5□□□□□ -0.89
YIPF3-201ENST00000372417 RWDD3Q9Y3V2 267 aa9.5□□□□□ -0.89
YIPF3-201ENST00000372417 SALL2Q9Y467 1007 aaPredicted RBP9.5□□□□□ -0.89
YIPF3-201ENST00000372417 LOXHD1Q8IVV2 1947 aa9.5□□□□□ -0.89
YIPF3-201ENST00000372417 MAGEB6P1A0A0J9YX57 407 aa9.49□□□□□ -0.89
YIPF3-201ENST00000372417 UPP2O95045 317 aa9.49□□□□□ -0.89
YIPF3-201ENST00000372417 MMP1P03956 469 aa9.49□□□□□ -0.89
YIPF3-201ENST00000372417 ATF7P17544 494 aaPredicted RBP9.49□□□□□ -0.89
YIPF3-201ENST00000372417 MTMR3Q13615 1198 aa9.49□□□□□ -0.89
YIPF3-201ENST00000372417 TMED8Q6PL24 325 aaPredicted RBP9.49□□□□□ -0.89
YIPF3-201ENST00000372417 SESTD1Q86VW0 696 aa9.49□□□□□ -0.89
YIPF3-201ENST00000372417 FIBCD1Q8N539 461 aa9.49□□□□□ -0.89
YIPF3-201ENST00000372417 EFHBQ8N7U6 833 aa9.49□□□□□ -0.89
YIPF3-201ENST00000372417 HAUS7Q99871 368 aa9.49□□□□□ -0.89
YIPF3-201ENST00000372417 DBNDD2Q9BQY9 259 aa9.49□□□□□ -0.89
YIPF3-201ENST00000372417 MFSD1Q9H3U5 465 aa9.49□□□□□ -0.89
YIPF3-201ENST00000372417 RNF146Q9NTX7 359 aa9.49□□□□□ -0.89
YIPF3-201ENST00000372417 TTC3P53804 2025 aa9.49□□□□□ -0.89
YIPF3-201ENST00000372417 EMSYQ7Z589 1322 aa9.49□□□□□ -0.89
YIPF3-201ENST00000372417 A6NJR5 290 aa9.48□□□□□ -0.89
YIPF3-201ENST00000372417 NKRFO15226 690 aaKnown RBP eCLIP9.48□□□□□ -0.89
YIPF3-201ENST00000372417 NDUFB10O96000 172 aa9.48□□□□□ -0.89
YIPF3-201ENST00000372417 CLCN5P51795 746 aa9.48□□□□□ -0.89
YIPF3-201ENST00000372417 G3BP1Q13283 466 aaKnown RBP eCLIP9.48□□□□□ -0.894e-7■□□□□ 8.7
YIPF3-201ENST00000372417 MBTPS1Q14703 1052 aa9.48□□□□□ -0.89
YIPF3-201ENST00000372417 ANGPT1Q15389 498 aa9.48□□□□□ -0.89
YIPF3-201ENST00000372417 KIAA0319Q5VV43 1072 aa9.48□□□□□ -0.89
YIPF3-201ENST00000372417 KREMEN2Q8NCW0 462 aa9.48□□□□□ -0.89
YIPF3-201ENST00000372417 DBF4BQ8NFT6 615 aa9.48□□□□□ -0.89
YIPF3-201ENST00000372417 MORC4Q8TE76 937 aa9.48□□□□□ -0.89
YIPF3-201ENST00000372417 SDR42E1Q8WUS8 393 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms