RNA–Protein interactions for RNA: ENST00000372273.7

TMEM254-201, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best)

Gene TMEM254, Length 2,074 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-201ENST00000372273 PKN1Q16512 942 aa10.99□□□□□ -0.65
TMEM254-201ENST00000372273 UBE2SQ16763 222 aa10.99□□□□□ -0.65
TMEM254-201ENST00000372273 ZNF274Q96GC6 653 aaPredicted RBP10.99□□□□□ -0.65
TMEM254-201ENST00000372273 DEFB118Q96PH6 123 aa10.99□□□□□ -0.65
TMEM254-201ENST00000372273 TINF2Q9BSI4 451 aa10.99□□□□□ -0.65
TMEM254-201ENST00000372273 PCDH10Q9P2E7 1040 aa10.99□□□□□ -0.65
TMEM254-201ENST00000372273 TCHHQ07283 1943 aa10.98□□□□□ -0.65
TMEM254-201ENST00000372273 ADCY6O43306 1168 aa10.98□□□□□ -0.65
TMEM254-201ENST00000372273 IGHA2P01877 340 aa10.98□□□□□ -0.65
TMEM254-201ENST00000372273 MYCNP04198 464 aaPredicted RBP10.98□□□□□ -0.65
TMEM254-201ENST00000372273 CSPP1Q1MSJ5 1256 aa10.98□□□□□ -0.65
TMEM254-201ENST00000372273 ARMCX2Q7L311 632 aa10.98□□□□□ -0.65
TMEM254-201ENST00000372273 SYTL5Q8TDW5 730 aaPredicted RBP10.98□□□□□ -0.65
TMEM254-201ENST00000372273 PGBD1Q96JS3 809 aa10.98□□□□□ -0.65
TMEM254-201ENST00000372273 LZTS2Q9BRK4 669 aa10.98□□□□□ -0.65
TMEM254-201ENST00000372273 ALDH8A1Q9H2A2 487 aaPredicted RBP10.98□□□□□ -0.65
TMEM254-201ENST00000372273 PDGFCQ9NRA1 345 aa10.98□□□□□ -0.65
TMEM254-201ENST00000372273 SZT2Q5T011 3432 aa10.98□□□□□ -0.65
TMEM254-201ENST00000372273 CPLX1O14810 134 aa10.97□□□□□ -0.65
TMEM254-201ENST00000372273 JAK2O60674 1132 aa10.97□□□□□ -0.65
TMEM254-201ENST00000372273 EIF2AK2P19525 551 aaKnown RBP10.97□□□□□ -0.65
TMEM254-201ENST00000372273 SYT1P21579 422 aa10.97□□□□□ -0.65
TMEM254-201ENST00000372273 GJB2P29033 226 aa10.97□□□□□ -0.65
TMEM254-201ENST00000372273 COPB2P35606 906 aa10.97□□□□□ -0.65
TMEM254-201ENST00000372273 TKFCQ3LXA3 575 aa10.97□□□□□ -0.65
TMEM254-201ENST00000372273 GJC2Q5T442 439 aaPredicted RBP10.97□□□□□ -0.65
TMEM254-201ENST00000372273 FBXO16Q8IX29 292 aaPredicted RBP10.97□□□□□ -0.65
TMEM254-201ENST00000372273 VPS54Q9P1Q0 977 aa10.97□□□□□ -0.65
TMEM254-201ENST00000372273 MRPL11Q9Y3B7 192 aaKnown RBP10.97□□□□□ -0.65
TMEM254-201ENST00000372273 MEIS2O14770 477 aa10.97□□□□□ -0.65
TMEM254-201ENST00000372273 PFASO15067 1338 aa10.97□□□□□ -0.65
TMEM254-201ENST00000372273 PFKFB2O60825 505 aa10.97□□□□□ -0.65
TMEM254-201ENST00000372273 ABCB11O95342 1321 aa10.97□□□□□ -0.65
TMEM254-201ENST00000372273 F13A1P00488 732 aa10.97□□□□□ -0.65
TMEM254-201ENST00000372273 FOSBP53539 338 aa10.97□□□□□ -0.65
TMEM254-201ENST00000372273 CCDC173Q0VFZ6 552 aa10.97□□□□□ -0.65
TMEM254-201ENST00000372273 FOXD4L6Q3SYB3 417 aaPredicted RBP10.97□□□□□ -0.65
TMEM254-201ENST00000372273 MAP3K21Q5TCX8 1036 aa10.97□□□□□ -0.65
TMEM254-201ENST00000372273 FOXD4L3Q6VB84 417 aaPredicted RBP10.97□□□□□ -0.65
TMEM254-201ENST00000372273 IL31RAQ8NI17 732 aa10.97□□□□□ -0.65
TMEM254-201ENST00000372273 RMDN3Q96TC7 470 aa10.97□□□□□ -0.65
TMEM254-201ENST00000372273 ZHX1Q9UKY1 873 aaPredicted RBP10.97□□□□□ -0.65
TMEM254-201ENST00000372273 CCDC196A0A1B0GTZ2 297 aa10.96□□□□□ -0.65
TMEM254-201ENST00000372273 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.96□□□□□ -0.65
TMEM254-201ENST00000372273 STXBP3O00186 592 aa10.96□□□□□ -0.65
TMEM254-201ENST00000372273 CYBAP13498 195 aa10.96□□□□□ -0.65
TMEM254-201ENST00000372273 IFNAR1P17181 557 aa10.96□□□□□ -0.65
TMEM254-201ENST00000372273 SMARCA1P28370 1054 aa10.96□□□□□ -0.65
TMEM254-201ENST00000372273 ALDH5A1P51649 535 aaPredicted RBP10.96□□□□□ -0.65
TMEM254-201ENST00000372273 NAPAP54920 295 aa10.96□□□□□ -0.65
TMEM254-201ENST00000372273 MFSD14CQ5VZR4 134 aa10.96□□□□□ -0.65
TMEM254-201ENST00000372273 OLFML2BQ68BL8 750 aa10.96□□□□□ -0.65
TMEM254-201ENST00000372273 PSTPIP2Q9H939 334 aa10.96□□□□□ -0.65
TMEM254-201ENST00000372273 SLC5A4Q9NY91 659 aa10.96□□□□□ -0.65
TMEM254-201ENST00000372273 RBM27Q9P2N5 1060 aaKnown RBP10.96□□□□□ -0.65
TMEM254-201ENST00000372273 RPTORQ8N122 1335 aa10.96□□□□□ -0.66
TMEM254-201ENST00000372273 ZNF865P0CJ78 1059 aaPredicted RBP10.96□□□□□ -0.66
TMEM254-201ENST00000372273 SCG2P13521 617 aa10.96□□□□□ -0.66
TMEM254-201ENST00000372273 FDPSP14324 419 aaKnown RBP10.96□□□□□ -0.66
TMEM254-201ENST00000372273 PDCP20941 246 aa10.96□□□□□ -0.66
TMEM254-201ENST00000372273 RCAN1P53805 252 aa10.96□□□□□ -0.66
TMEM254-201ENST00000372273 PFKFB3Q16875 520 aaPredicted RBP10.96□□□□□ -0.66
TMEM254-201ENST00000372273 LRSAM1Q6UWE0 723 aa10.96□□□□□ -0.66
TMEM254-201ENST00000372273 RASGRP4Q8TDF6 673 aa10.96□□□□□ -0.66
TMEM254-201ENST00000372273 U2AF1L4Q8WU68 220 aaKnown RBP10.96□□□□□ -0.66
TMEM254-201ENST00000372273 GTF3C6Q969F1 213 aa10.96□□□□□ -0.66
TMEM254-201ENST00000372273 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.96□□□□□ -0.66
TMEM254-201ENST00000372273 HMX1Q9NP08 348 aaPredicted RBP10.96□□□□□ -0.66
TMEM254-201ENST00000372273 PAK6Q9NQU5 681 aaPredicted RBP10.96□□□□□ -0.66
TMEM254-201ENST00000372273 TMEM260Q9NX78 707 aa10.96□□□□□ -0.66
TMEM254-201ENST00000372273 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.96□□□□□ -0.66
TMEM254-201ENST00000372273 TMEM63CQ9P1W3 806 aa10.96□□□□□ -0.66
TMEM254-201ENST00000372273 CDH23Q9H251 3354 aa10.95□□□□□ -0.66
TMEM254-201ENST00000372273 SMCO2A6NFE2 343 aa10.95□□□□□ -0.66
TMEM254-201ENST00000372273 GCOM1H8Y6P7 765 aaPredicted RBP10.95□□□□□ -0.66
TMEM254-201ENST00000372273 PRPF3O43395 683 aaKnown RBP10.95□□□□□ -0.66
TMEM254-201ENST00000372273 SORBS3O60504 671 aa10.95□□□□□ -0.66
TMEM254-201ENST00000372273 POLR2MP0CAP2 368 aa10.95□□□□□ -0.66
TMEM254-201ENST00000372273 ADCYAP1R1P41586 468 aa10.95□□□□□ -0.66
TMEM254-201ENST00000372273 HSD17B4P51659 736 aa10.95□□□□□ -0.66
TMEM254-201ENST00000372273 CCDC144BQ3MJ40 725 aa10.95□□□□□ -0.66
TMEM254-201ENST00000372273 LHX8Q68G74 356 aa10.95□□□□□ -0.66
TMEM254-201ENST00000372273 MAMDC4Q6UXC1 1216 aa10.95□□□□□ -0.66
TMEM254-201ENST00000372273 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.95□□□□□ -0.66
TMEM254-201ENST00000372273 TMEM87AQ8NBN3 555 aa10.95□□□□□ -0.66
TMEM254-201ENST00000372273 UIMC1Q96RL1 719 aa10.95□□□□□ -0.66
TMEM254-201ENST00000372273 BARHL2Q9NY43 387 aa10.95□□□□□ -0.66
TMEM254-201ENST00000372273 KCNJ14Q9UNX9 436 aa10.95□□□□□ -0.66
TMEM254-201ENST00000372273 CNPY2Q9Y2B0 182 aa10.95□□□□□ -0.66
TMEM254-201ENST00000372273 NID2Q14112 1375 aa10.95□□□□□ -0.66
TMEM254-201ENST00000372273 VPS37CA5D8V6 355 aaPredicted RBP10.94□□□□□ -0.66
TMEM254-201ENST00000372273 RBAK-RBAKDNI3L0D1 243 aa10.94□□□□□ -0.66
TMEM254-201ENST00000372273 PGK1P00558 417 aa10.94□□□□□ -0.66
TMEM254-201ENST00000372273 MYCLP12524 364 aaPredicted RBP10.94□□□□□ -0.66
TMEM254-201ENST00000372273 SSRP1Q08945 709 aaKnown RBP10.94□□□□□ -0.66
TMEM254-201ENST00000372273 ACVR2BQ13705 512 aa10.94□□□□□ -0.66
TMEM254-201ENST00000372273 ARHGEF16Q5VV41 709 aa10.94□□□□□ -0.66
TMEM254-201ENST00000372273 MCF2L2Q86YR7 1114 aa10.94□□□□□ -0.66
TMEM254-201ENST00000372273 DIS3LQ8TF46 1054 aaKnown RBP10.94□□□□□ -0.66
TMEM254-201ENST00000372273 TMEM106CQ9BVX2 250 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms