RNA–Protein interactions for RNA: ENST00000370886.9

EXOSC1-203, Transcript of exosome component 1, humanhuman

TSL 5 BASIC

Gene EXOSC1, Length 741 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-203ENST00000370886 GPKOWQ92917 476 aaPredicted RBP eCLIP12.35□□□□□ -0.43
EXOSC1-203ENST00000370886 BADQ92934 168 aa12.35□□□□□ -0.43
EXOSC1-203ENST00000370886 RNPC3Q96LT9 517 aaKnown RBP12.35□□□□□ -0.43
EXOSC1-203ENST00000370886 PNMA2Q9UL42 364 aa12.35□□□□□ -0.43
EXOSC1-203ENST00000370886 MRPL11Q9Y3B7 192 aaKnown RBP12.35□□□□□ -0.43
EXOSC1-203ENST00000370886 MYH4Q9Y623 1939 aa12.35□□□□□ -0.43
EXOSC1-203ENST00000370886 ABCB11O95342 1321 aa12.35□□□□□ -0.43
EXOSC1-203ENST00000370886 COBLO75128 1261 aa12.34□□□□□ -0.43
EXOSC1-203ENST00000370886 SMARCA1P28370 1054 aa12.34□□□□□ -0.43
EXOSC1-203ENST00000370886 SSRP1Q08945 709 aaKnown RBP12.34□□□□□ -0.43
EXOSC1-203ENST00000370886 BAATQ14032 418 aaPredicted RBP12.34□□□□□ -0.43
EXOSC1-203ENST00000370886 GRB14Q14449 540 aa12.34□□□□□ -0.43
EXOSC1-203ENST00000370886 CCDC83Q8IWF9 413 aa12.34□□□□□ -0.43
EXOSC1-203ENST00000370886 TRIM22Q8IYM9 498 aa12.34□□□□□ -0.43
EXOSC1-203ENST00000370886 CLEC4DQ8WXI8 215 aa12.34□□□□□ -0.43
EXOSC1-203ENST00000370886 MTMR8Q96EF0 704 aa12.34□□□□□ -0.43
EXOSC1-203ENST00000370886 PURBQ96QR8 312 aaKnown RBP12.34□□□□□ -0.43
EXOSC1-203ENST00000370886 A1CFQ9NQ94 594 aaKnown RBP12.34□□□□□ -0.43
EXOSC1-203ENST00000370886 PDLIM7Q9NR12 457 aa12.34□□□□□ -0.43
EXOSC1-203ENST00000370886 FLRT1Q9NZU1 646 aa12.34□□□□□ -0.43
EXOSC1-203ENST00000370886 ZNF236Q9UL36 1845 aa12.34□□□□□ -0.43
EXOSC1-203ENST00000370886 CNTNAP5Q8WYK1 1306 aa12.34□□□□□ -0.43
EXOSC1-203ENST00000370886 CDKL5O76039 1030 aa12.33□□□□□ -0.44
EXOSC1-203ENST00000370886 CFBP00751 764 aa12.33□□□□□ -0.44
EXOSC1-203ENST00000370886 CYBAP13498 195 aa12.33□□□□□ -0.44
EXOSC1-203ENST00000370886 CYP2C19P33261 490 aa12.33□□□□□ -0.44
EXOSC1-203ENST00000370886 NAPAP54920 295 aa12.33□□□□□ -0.44
EXOSC1-203ENST00000370886 FUT2Q10981 343 aa12.33□□□□□ -0.44
EXOSC1-203ENST00000370886 TRAF1Q13077 416 aa12.33□□□□□ -0.44
EXOSC1-203ENST00000370886 SNX17Q15036 470 aa12.33□□□□□ -0.44
EXOSC1-203ENST00000370886 TRIM60Q495X7 471 aa12.33□□□□□ -0.44
EXOSC1-203ENST00000370886 GJC2Q5T442 439 aaPredicted RBP12.33□□□□□ -0.44
EXOSC1-203ENST00000370886 RNF207Q6ZRF8 634 aa12.33□□□□□ -0.44
EXOSC1-203ENST00000370886 MCF2L2Q86YR7 1114 aa12.33□□□□□ -0.44
EXOSC1-203ENST00000370886 TBC1D5Q92609 795 aa12.33□□□□□ -0.44
EXOSC1-203ENST00000370886 GTF3C6Q969F1 213 aa12.33□□□□□ -0.44
EXOSC1-203ENST00000370886 ZSCAN31Q96LW9 406 aaPredicted RBP12.33□□□□□ -0.44
EXOSC1-203ENST00000370886 SLC5A4Q9NY91 659 aa12.33□□□□□ -0.44
EXOSC1-203ENST00000370886 PRPF3O43395 683 aaKnown RBP12.32□□□□□ -0.44
EXOSC1-203ENST00000370886 CD2BP2O95400 341 aaKnown RBP12.32□□□□□ -0.44
EXOSC1-203ENST00000370886 IFNAR1P17181 557 aa12.32□□□□□ -0.44
EXOSC1-203ENST00000370886 HOXA13P31271 388 aaPredicted RBP12.32□□□□□ -0.44
EXOSC1-203ENST00000370886 FOSBP53539 338 aa12.32□□□□□ -0.44
EXOSC1-203ENST00000370886 CNTN2Q02246 1040 aa12.32□□□□□ -0.44
EXOSC1-203ENST00000370886 NTRK3Q16288 839 aa12.32□□□□□ -0.44
EXOSC1-203ENST00000370886 C1orf53Q5VUE5 145 aa12.32□□□□□ -0.44
EXOSC1-203ENST00000370886 OLFML2BQ68BL8 750 aa12.32□□□□□ -0.44
EXOSC1-203ENST00000370886 WWC2Q6AWC2 1192 aa12.32□□□□□ -0.44
EXOSC1-203ENST00000370886 SLC30A10Q6XR72 485 aa12.32□□□□□ -0.44
EXOSC1-203ENST00000370886 FCHSD1Q86WN1 690 aa12.32□□□□□ -0.44
EXOSC1-203ENST00000370886 ABRAQ8N0Z2 381 aa12.32□□□□□ -0.44
EXOSC1-203ENST00000370886 NPLOC4Q8TAT6 608 aa12.32□□□□□ -0.44
EXOSC1-203ENST00000370886 GCOM1H8Y6P7 765 aaPredicted RBP12.31□□□□□ -0.44
EXOSC1-203ENST00000370886 SEPT4O43236 478 aa12.31□□□□□ -0.44
EXOSC1-203ENST00000370886 JAK2O60674 1132 aa12.31□□□□□ -0.44
EXOSC1-203ENST00000370886 MYCNP04198 464 aaPredicted RBP12.31□□□□□ -0.44
EXOSC1-203ENST00000370886 POLR2MP0CAP2 368 aa12.31□□□□□ -0.44
EXOSC1-203ENST00000370886 SCG2P13521 617 aa12.31□□□□□ -0.44
EXOSC1-203ENST00000370886 DNAJB2P25686 324 aa12.31□□□□□ -0.44
EXOSC1-203ENST00000370886 PLA2G5P39877 138 aa12.31□□□□□ -0.44
EXOSC1-203ENST00000370886 RPS6P62753 249 aaKnown RBP12.31□□□□□ -0.44
EXOSC1-203ENST00000370886 ATXN2LQ8WWM7 1075 aaKnown RBP12.31□□□□□ -0.44
EXOSC1-203ENST00000370886 CUL5Q93034 780 aa12.31□□□□□ -0.44
EXOSC1-203ENST00000370886 RNF26Q9BY78 433 aaPredicted RBP12.31□□□□□ -0.44
EXOSC1-203ENST00000370886 PSTPIP2Q9H939 334 aa12.31□□□□□ -0.44
EXOSC1-203ENST00000370886 SH2B1Q9NRF2 756 aaPredicted RBP12.31□□□□□ -0.44
EXOSC1-203ENST00000370886 CYP39A1Q9NYL5 469 aa12.31□□□□□ -0.44
EXOSC1-203ENST00000370886 ORC3Q9UBD5 711 aaPredicted RBP12.31□□□□□ -0.44
EXOSC1-203ENST00000370886 DDX49Q9Y6V7 483 aaKnown RBP12.31□□□□□ -0.44
EXOSC1-203ENST00000370886 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.3□□□□□ -0.44
EXOSC1-203ENST00000370886 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.3□□□□□ -0.44
EXOSC1-203ENST00000370886 CTDNEP1O95476 244 aa12.3□□□□□ -0.44
EXOSC1-203ENST00000370886 MCM2P49736 904 aa12.3□□□□□ -0.44
EXOSC1-203ENST00000370886 PFKFB3Q16875 520 aaPredicted RBP12.3□□□□□ -0.44
EXOSC1-203ENST00000370886 ZNF792Q3KQV3 632 aa12.3□□□□□ -0.44
EXOSC1-203ENST00000370886 USP38Q8NB14 1042 aa12.3□□□□□ -0.44
EXOSC1-203ENST00000370886 TRPV1Q8NER1 839 aa12.3□□□□□ -0.44
EXOSC1-203ENST00000370886 SMARCC2Q8TAQ2 1214 aa12.3□□□□□ -0.44
EXOSC1-203ENST00000370886 FAM122AQ96E09 287 aa12.3□□□□□ -0.44
EXOSC1-203ENST00000370886 TMX3Q96JJ7 454 aa12.3□□□□□ -0.44
EXOSC1-203ENST00000370886 AIFM3Q96NN9 605 aa12.3□□□□□ -0.44
EXOSC1-203ENST00000370886 GAS2L1Q99501 681 aaPredicted RBP12.3□□□□□ -0.44
EXOSC1-203ENST00000370886 VPS54Q9P1Q0 977 aa12.3□□□□□ -0.44
EXOSC1-203ENST00000370886 NID2Q14112 1375 aa12.3□□□□□ -0.44
EXOSC1-203ENST00000370886 BDP1A6H8Y1 2624 aa12.29□□□□□ -0.44
EXOSC1-203ENST00000370886 TRIM43BA6NCK2 446 aa12.29□□□□□ -0.44
EXOSC1-203ENST00000370886 SOWAHBA6NEL2 793 aa12.29□□□□□ -0.44
EXOSC1-203ENST00000370886 SMCO2A6NFE2 343 aa12.29□□□□□ -0.44
EXOSC1-203ENST00000370886 STXBP3O00186 592 aa12.29□□□□□ -0.44
EXOSC1-203ENST00000370886 DEXIO95424 95 aa12.29□□□□□ -0.44
EXOSC1-203ENST00000370886 CLTBP09497 229 aa12.29□□□□□ -0.44
EXOSC1-203ENST00000370886 RAG1P15918 1043 aa12.29□□□□□ -0.44
EXOSC1-203ENST00000370886 ADCYAP1R1P41586 468 aa12.29□□□□□ -0.44
EXOSC1-203ENST00000370886 ADCY7P51828 1080 aa12.29□□□□□ -0.44
EXOSC1-203ENST00000370886 TLE2Q04725 743 aa12.29□□□□□ -0.44
EXOSC1-203ENST00000370886 GRIN2CQ14957 1233 aa12.29□□□□□ -0.44
EXOSC1-203ENST00000370886 PKN1Q16512 942 aa12.29□□□□□ -0.44
EXOSC1-203ENST00000370886 UBE2SQ16763 222 aa12.29□□□□□ -0.44
EXOSC1-203ENST00000370886 PRAMEF19Q5SWL8 479 aa12.29□□□□□ -0.44
EXOSC1-203ENST00000370886 ANO1Q5XXA6 986 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms